Warning: Permanently added '140.211.168.156' (ED25519) to the list of known hosts.
You can reproduce this build on your computer by running:
sudo dnf install copr-rpmbuild
/usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6408207-fedora-rawhide-ppc64le --chroot fedora-rawhide-ppc64le
Version: 0.69
PID: 5919
Logging PID: 5920
Task:
{'appstream': False,
'background': True,
'build_id': 6408207,
'buildroot_pkgs': [],
'chroot': 'fedora-rawhide-ppc64le',
'enable_net': False,
'fedora_review': False,
'git_hash': '2586c48e65d92db308ab7ffa92c1d46524e9837f',
'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/mmseq',
'isolation': 'default',
'memory_reqs': 2048,
'package_name': 'mmseq',
'package_version': '1.0.11-16',
'project_dirname': 'zlib-ng-compat-mpb',
'project_name': 'zlib-ng-compat-mpb',
'project_owner': 'tuliom',
'repo_priority': None,
'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/tuliom/zlib-ng-compat-mpb/fedora-rawhide-ppc64le/',
'id': 'copr_base',
'name': 'Copr repository',
'priority': None}],
'sandbox': 'tuliom/zlib-ng-compat-mpb--tuliom',
'source_json': {},
'source_type': None,
'submitter': 'tuliom',
'tags': [],
'task_id': '6408207-fedora-rawhide-ppc64le',
'timeout': 115200,
'uses_devel_repo': False,
'with_opts': [],
'without_opts': []}
Running: git clone https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/mmseq /var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq --depth 500 --no-single-branch --recursive
cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/mmseq', '/var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout:
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq'...
Running: git checkout 2586c48e65d92db308ab7ffa92c1d46524e9837f --
cmd: ['git', 'checkout', '2586c48e65d92db308ab7ffa92c1d46524e9837f', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq
rc: 0
stdout:
stderr: Note: switching to '2586c48e65d92db308ab7ffa92c1d46524e9837f'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at 2586c48 automatic import of mmseq
Running: copr-distgit-client sources
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq
rc: 0
stdout:
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading 1.0.11.zip
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o 1.0.11.zip --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/tuliom/zlib-ng-compat-mpb/mmseq/1.0.11.zip/md5/c727916d339d7a2111523800b621ce2b/1.0.11.zip
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 2781k 100 2781k 0 0 3643k 0 --:--:-- --:--:-- --:--:-- 3640k
INFO: Reading stdout from command: md5sum 1.0.11.zip
Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq/mmseq.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1695067711.503818 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.1.1 starting (python version = 3.11.3, NVR = mock-5.1.1-1.fc38)...
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq/mmseq.spec) Config(fedora-rawhide-ppc64le)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.1.1
INFO: Mock Version: 5.1.1
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695067711.503818/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695067711.503818/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/beb0de4744e4962ffb82970f219a3113083def0169e600824024dd4ef0391d1c/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/beb0de4744e4962ffb82970f219a3113083def0169e600824024dd4ef0391d1c/merged) with podman image umount
INFO: Package manager dnf detected and used (fallback)
INFO: Bootstrap image not marked ready
Start(bootstrap): installing dnf tooling
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 19 MB/s | 5.1 MB 00:00
fedora 11 MB/s | 67 MB 00:06
Last metadata expiration check: 0:00:02 ago on Mon Sep 18 20:09:54 2023.
Package python3-dnf-4.16.2-4.fc40.noarch is already installed.
Dependencies resolved.
================================================================================
Package Arch Version Repository Size
================================================================================
Installing:
python3-dnf-plugins-core noarch 4.4.2-1.fc39 fedora 293 k
Installing dependencies:
dbus-libs ppc64le 1:1.14.10-1.fc40 fedora 177 k
python3-dateutil noarch 1:2.8.2-10.fc39 fedora 355 k
python3-dbus ppc64le 1.3.2-4.fc39 fedora 161 k
python3-distro noarch 1.8.0-6.fc39 fedora 49 k
python3-six noarch 1.16.0-12.fc39 fedora 41 k
python3-systemd ppc64le 235-5.fc39 fedora 108 k
Transaction Summary
================================================================================
Install 7 Packages
Total download size: 1.2 M
Installed size: 4.8 M
Downloading Packages:
(1/7): python3-dbus-1.3.2-4.fc39.ppc64le.rpm 398 kB/s | 161 kB 00:00
(2/7): dbus-libs-1.14.10-1.fc40.ppc64le.rpm 423 kB/s | 177 kB 00:00
(3/7): python3-dateutil-2.8.2-10.fc39.noarch.rp 770 kB/s | 355 kB 00:00
(4/7): python3-distro-1.8.0-6.fc39.noarch.rpm 325 kB/s | 49 kB 00:00
(5/7): python3-six-1.16.0-12.fc39.noarch.rpm 422 kB/s | 41 kB 00:00
(6/7): python3-dnf-plugins-core-4.4.2-1.fc39.no 1.3 MB/s | 293 kB 00:00
(7/7): python3-systemd-235-5.fc39.ppc64le.rpm 916 kB/s | 108 kB 00:00
--------------------------------------------------------------------------------
Total 1.1 MB/s | 1.2 MB 00:01
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Preparing : 1/1
Installing : python3-systemd-235-5.fc39.ppc64le 1/7
Installing : python3-six-1.16.0-12.fc39.noarch 2/7
Installing : python3-dateutil-1:2.8.2-10.fc39.noarch 3/7
Installing : python3-distro-1.8.0-6.fc39.noarch 4/7
Installing : dbus-libs-1:1.14.10-1.fc40.ppc64le 5/7
Installing : python3-dbus-1.3.2-4.fc39.ppc64le 6/7
Installing : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7
Running scriptlet: python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7
Verifying : dbus-libs-1:1.14.10-1.fc40.ppc64le 1/7
Verifying : python3-dateutil-1:2.8.2-10.fc39.noarch 2/7
Verifying : python3-dbus-1.3.2-4.fc39.ppc64le 3/7
Verifying : python3-distro-1.8.0-6.fc39.noarch 4/7
Verifying : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 5/7
Verifying : python3-six-1.16.0-12.fc39.noarch 6/7
Verifying : python3-systemd-235-5.fc39.ppc64le 7/7
Installed:
dbus-libs-1:1.14.10-1.fc40.ppc64le
python3-dateutil-1:2.8.2-10.fc39.noarch
python3-dbus-1.3.2-4.fc39.ppc64le
python3-distro-1.8.0-6.fc39.noarch
python3-dnf-plugins-core-4.4.2-1.fc39.noarch
python3-six-1.16.0-12.fc39.noarch
python3-systemd-235-5.fc39.ppc64le
Complete!
Finish(bootstrap): installing dnf tooling
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf detected and used (direct choice)
Start: installing minimal buildroot with dnf
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 3.2 MB/s | 5.1 MB 00:01
fedora 11 MB/s | 67 MB 00:06
Last metadata expiration check: 0:00:04 ago on Mon Sep 18 20:11:18 2023.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing group/module packages:
bash ppc64le 5.2.15-5.fc39 fedora 1.9 M
bzip2 ppc64le 1.0.8-16.fc39 fedora 53 k
coreutils ppc64le 9.4-1.fc40 fedora 1.4 M
cpio ppc64le 2.14-4.fc39 fedora 286 k
diffutils ppc64le 3.10-3.fc39 fedora 408 k
fedora-release-common noarch 40-0.7 fedora 18 k
findutils ppc64le 1:4.9.0-6.fc40 fedora 540 k
gawk ppc64le 5.2.2-2.fc39 fedora 1.1 M
glibc-minimal-langpack ppc64le 2.38.9000-8.fc40 copr_base 73 k
grep ppc64le 3.11-5.fc40 fedora 308 k
gzip ppc64le 1.12-6.fc39 fedora 170 k
info ppc64le 7.0.3-3.fc39 fedora 200 k
patch ppc64le 2.7.6-22.fc39 fedora 137 k
redhat-rpm-config noarch 270-1.fc40 copr_base 74 k
rpm-build ppc64le 4.18.99-1.fc40 fedora 80 k
sed ppc64le 4.8-14.fc39 fedora 312 k
shadow-utils ppc64le 2:4.14.0-1.fc40 fedora 1.3 M
tar ppc64le 2:1.35-2.fc40 fedora 884 k
unzip ppc64le 6.0-62.fc39 fedora 190 k
util-linux ppc64le 2.39.2-1.fc40 copr_base 1.2 M
which ppc64le 2.21-40.fc39 fedora 43 k
xz ppc64le 5.4.4-1.fc39 fedora 559 k
Installing dependencies:
alternatives ppc64le 1.25-1.fc39 fedora 41 k
ansible-srpm-macros noarch 1-11.fc39 fedora 21 k
audit-libs ppc64le 3.1.2-4.fc40 fedora 132 k
authselect ppc64le 1.4.2-3.fc39 fedora 145 k
authselect-libs ppc64le 1.4.2-3.fc39 fedora 253 k
basesystem noarch 11-18.fc39 fedora 7.2 k
binutils ppc64le 2.41-5.fc40 fedora 6.4 M
binutils-gold ppc64le 2.41-5.fc40 fedora 1.1 M
bzip2-libs ppc64le 1.0.8-16.fc39 fedora 47 k
ca-certificates noarch 2023.2.60_v7.0.306-3.fc40 fedora 837 k
coreutils-common ppc64le 9.4-1.fc40 fedora 2.1 M
cracklib ppc64le 2.9.11-2.fc40 copr_base 86 k
crypto-policies noarch 20230731-1.git5ed06e0.fc39 fedora 99 k
curl ppc64le 8.3.0-1.fc40 copr_base 357 k
cyrus-sasl-lib ppc64le 2.1.28-11.fc40 copr_base 878 k
debugedit ppc64le 5.0-10.fc39 fedora 80 k
dwz ppc64le 0.15-3.fc39 fedora 147 k
ed ppc64le 1.19-4.fc39 fedora 81 k
efi-srpm-macros noarch 5-9.fc39 fedora 22 k
elfutils ppc64le 0.189-6.fc40 copr_base 563 k
elfutils-debuginfod-client ppc64le 0.189-6.fc40 copr_base 40 k
elfutils-default-yama-scope noarch 0.189-6.fc40 copr_base 14 k
elfutils-libelf ppc64le 0.189-6.fc40 copr_base 204 k
elfutils-libs ppc64le 0.189-6.fc40 copr_base 294 k
fedora-gpg-keys noarch 40-0.1 fedora 130 k
fedora-release noarch 40-0.7 fedora 8.0 k
fedora-release-identity-basic
noarch 40-0.7 fedora 8.8 k
fedora-repos noarch 40-0.1 fedora 9.4 k
fedora-repos-rawhide noarch 40-0.1 fedora 9.0 k
file ppc64le 5.45-1.fc40 copr_base 50 k
file-libs ppc64le 5.45-1.fc40 copr_base 775 k
filesystem ppc64le 3.18-6.fc39 fedora 1.1 M
fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k
forge-srpm-macros noarch 0.1.0-1.fc40 fedora 18 k
fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k
gdb-minimal ppc64le 13.2-8.fc40 fedora 4.2 M
gdbm-libs ppc64le 1:1.23-4.fc39 fedora 62 k
ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k
glibc ppc64le 2.38.9000-8.fc40 copr_base 2.2 M
glibc-common ppc64le 2.38.9000-8.fc40 copr_base 364 k
glibc-gconv-extra ppc64le 2.38.9000-8.fc40 copr_base 2.0 M
gmp ppc64le 1:6.2.1-5.fc39 fedora 304 k
gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k
go-srpm-macros noarch 3.2.0-7.fc40 fedora 27 k
jansson ppc64le 2.13.1-7.fc39 fedora 49 k
kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k
keyutils-libs ppc64le 1.6.1-7.fc39 fedora 32 k
krb5-libs ppc64le 1.21.2-1.fc40 fedora 850 k
libacl ppc64le 2.3.1-9.fc40 fedora 26 k
libarchive ppc64le 3.7.2-1.fc40 copr_base 477 k
libattr ppc64le 2.5.1-9.fc40 fedora 19 k
libblkid ppc64le 2.39.2-1.fc40 copr_base 134 k
libbrotli ppc64le 1.1.0-1.fc40 fedora 380 k
libcap ppc64le 2.48-7.fc39 fedora 73 k
libcap-ng ppc64le 0.8.3-8.fc40 fedora 33 k
libcom_err ppc64le 1.47.0-2.fc39 fedora 27 k
libcurl ppc64le 8.3.0-1.fc40 copr_base 380 k
libdb ppc64le 5.3.28-58.fc40 copr_base 831 k
libeconf ppc64le 0.5.2-1.fc40 fedora 34 k
libevent ppc64le 2.1.12-9.fc39 fedora 275 k
libfdisk ppc64le 2.39.2-1.fc40 copr_base 179 k
libffi ppc64le 3.4.4-4.fc39 fedora 38 k
libgcc ppc64le 13.2.1-1.fc39 fedora 104 k
libgomp ppc64le 13.2.1-1.fc39 fedora 332 k
libidn2 ppc64le 2.3.4-3.fc39 fedora 121 k
libmount ppc64le 2.39.2-1.fc40 copr_base 177 k
libnghttp2 ppc64le 1.56.0-1.fc40 copr_base 85 k
libnsl2 ppc64le 2.0.0-6.fc39 fedora 32 k
libpkgconf ppc64le 1.9.5-2.fc39 fedora 42 k
libpsl ppc64le 0.21.2-4.fc39 fedora 65 k
libpwquality ppc64le 1.4.5-6.fc39 fedora 123 k
librtas ppc64le 2.0.4-3.fc39 fedora 70 k
libselinux ppc64le 3.5-5.fc39 fedora 100 k
libsemanage ppc64le 3.5-4.fc39 fedora 131 k
libsepol ppc64le 3.5-2.fc39 fedora 356 k
libsigsegv ppc64le 2.14-5.fc39 fedora 28 k
libsmartcols ppc64le 2.39.2-1.fc40 copr_base 74 k
libssh ppc64le 0.10.5-2.fc39 fedora 238 k
libssh-config noarch 0.10.5-2.fc39 fedora 9.2 k
libstdc++ ppc64le 13.2.1-1.fc39 fedora 994 k
libtasn1 ppc64le 4.19.0-3.fc39 fedora 80 k
libtirpc ppc64le 1.3.3-1.rc2.fc39 fedora 108 k
libunistring ppc64le 1.1-5.fc40 fedora 578 k
libutempter ppc64le 1.2.1-10.fc39 fedora 27 k
libuuid ppc64le 2.39.2-1.fc40 copr_base 30 k
libverto ppc64le 0.3.2-6.fc39 fedora 22 k
libxcrypt ppc64le 4.4.36-2.fc39 fedora 132 k
libxml2 ppc64le 2.11.5-1.fc40 copr_base 778 k
libzstd ppc64le 1.5.5-4.fc40 copr_base 336 k
lua-libs ppc64le 5.4.6-3.fc39 fedora 149 k
lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k
lz4-libs ppc64le 1.9.4-4.fc39 fedora 85 k
mpfr ppc64le 4.2.0-3.fc39 fedora 353 k
ncurses-base noarch 6.4-7.20230520.fc40 fedora 88 k
ncurses-libs ppc64le 6.4-7.20230520.fc40 fedora 380 k
ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k
openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k
openldap ppc64le 2.6.6-1.fc39 fedora 287 k
openssl-libs ppc64le 1:3.1.1-4.fc40 copr_base 2.3 M
p11-kit ppc64le 0.25.0-2.fc39 fedora 500 k
p11-kit-trust ppc64le 0.25.0-2.fc39 fedora 156 k
package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k
pam ppc64le 1.5.3-2.fc39 fedora 592 k
pam-libs ppc64le 1.5.3-2.fc39 fedora 64 k
pcre2 ppc64le 10.42-1.fc39.2 fedora 241 k
pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k
perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k
pkgconf ppc64le 1.9.5-2.fc39 fedora 43 k
pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k
pkgconf-pkg-config ppc64le 1.9.5-2.fc39 fedora 9.6 k
popt ppc64le 1.19-3.fc39 fedora 71 k
publicsuffix-list-dafsa noarch 20230812-1.fc40 fedora 57 k
pyproject-srpm-macros noarch 1.9.0-2.fc39 fedora 14 k
python-srpm-macros noarch 3.12-4.fc40 fedora 25 k
qt5-srpm-macros noarch 5.15.10-2.fc39 fedora 8.3 k
qt6-srpm-macros noarch 6.5.2-2.fc39 fedora 9.2 k
readline ppc64le 8.2-4.fc39 fedora 229 k
rpm ppc64le 4.18.99-1.fc40 fedora 537 k
rpm-build-libs ppc64le 4.18.99-1.fc40 fedora 103 k
rpm-libs ppc64le 4.18.99-1.fc40 fedora 356 k
rpm-sequoia ppc64le 1.5.0-1.fc40 fedora 1.7 M
rust-srpm-macros noarch 24-5.fc40 fedora 12 k
setup noarch 2.14.4-1.fc39 fedora 154 k
sqlite-libs ppc64le 3.43.1-1.fc40 fedora 798 k
systemd-libs ppc64le 254.1-2.fc40 fedora 733 k
tzdata noarch 2023c-3.fc40 fedora 718 k
util-linux-core ppc64le 2.39.2-1.fc40 copr_base 520 k
xxhash-libs ppc64le 0.8.2-1.fc39 fedora 37 k
xz-libs ppc64le 5.4.4-1.fc39 fedora 121 k
zip ppc64le 3.0-38.fc39 fedora 274 k
zlib-ng-compat ppc64le 2.1.3-3.fc40 copr_base 83 k
zstd ppc64le 1.5.5-4.fc40 copr_base 500 k
Installing Groups:
Buildsystem building group
Transaction Summary
================================================================================
Install 154 Packages
Total download size: 57 M
Installed size: 327 M
Downloading Packages:
(1/154): cracklib-2.9.11-2.fc40.ppc64le.rpm 1.1 MB/s | 86 kB 00:00
(2/154): curl-8.3.0-1.fc40.ppc64le.rpm 4.0 MB/s | 357 kB 00:00
(3/154): elfutils-0.189-6.fc40.ppc64le.rpm 25 MB/s | 563 kB 00:00
(4/154): cyrus-sasl-lib-2.1.28-11.fc40.ppc64le. 8.3 MB/s | 878 kB 00:00
(5/154): elfutils-debuginfod-client-0.189-6.fc4 3.2 MB/s | 40 kB 00:00
(6/154): elfutils-default-yama-scope-0.189-6.fc 1.6 MB/s | 14 kB 00:00
(7/154): elfutils-libelf-0.189-6.fc40.ppc64le.r 24 MB/s | 204 kB 00:00
(8/154): elfutils-libs-0.189-6.fc40.ppc64le.rpm 25 MB/s | 294 kB 00:00
(9/154): file-5.45-1.fc40.ppc64le.rpm 4.4 MB/s | 50 kB 00:00
(10/154): file-libs-5.45-1.fc40.ppc64le.rpm 26 MB/s | 775 kB 00:00
(11/154): glibc-common-2.38.9000-8.fc40.ppc64le 12 MB/s | 364 kB 00:00
(12/154): glibc-2.38.9000-8.fc40.ppc64le.rpm 46 MB/s | 2.2 MB 00:00
(13/154): glibc-minimal-langpack-2.38.9000-8.fc 2.9 MB/s | 73 kB 00:00
(14/154): glibc-gconv-extra-2.38.9000-8.fc40.pp 49 MB/s | 2.0 MB 00:00
(15/154): libarchive-3.7.2-1.fc40.ppc64le.rpm 21 MB/s | 477 kB 00:00
(16/154): libblkid-2.39.2-1.fc40.ppc64le.rpm 6.0 MB/s | 134 kB 00:00
(17/154): libcurl-8.3.0-1.fc40.ppc64le.rpm 36 MB/s | 380 kB 00:00
(18/154): libdb-5.3.28-58.fc40.ppc64le.rpm 50 MB/s | 831 kB 00:00
(19/154): libfdisk-2.39.2-1.fc40.ppc64le.rpm 9.9 MB/s | 179 kB 00:00
(20/154): libmount-2.39.2-1.fc40.ppc64le.rpm 11 MB/s | 177 kB 00:00
(21/154): libnghttp2-1.56.0-1.fc40.ppc64le.rpm 12 MB/s | 85 kB 00:00
(22/154): libsmartcols-2.39.2-1.fc40.ppc64le.rp 9.7 MB/s | 74 kB 00:00
(23/154): libuuid-2.39.2-1.fc40.ppc64le.rpm 3.7 MB/s | 30 kB 00:00
(24/154): libxml2-2.11.5-1.fc40.ppc64le.rpm 32 MB/s | 778 kB 00:00
(25/154): libzstd-1.5.5-4.fc40.ppc64le.rpm 12 MB/s | 336 kB 00:00
(26/154): openssl-libs-3.1.1-4.fc40.ppc64le.rpm 54 MB/s | 2.3 MB 00:00
(27/154): redhat-rpm-config-270-1.fc40.noarch.r 5.8 MB/s | 74 kB 00:00
(28/154): util-linux-core-2.39.2-1.fc40.ppc64le 31 MB/s | 520 kB 00:00
(29/154): util-linux-2.39.2-1.fc40.ppc64le.rpm 44 MB/s | 1.2 MB 00:00
(30/154): zlib-ng-compat-2.1.3-3.fc40.ppc64le.r 6.5 MB/s | 83 kB 00:00
(31/154): zstd-1.5.5-4.fc40.ppc64le.rpm 31 MB/s | 500 kB 00:00
(32/154): ansible-srpm-macros-1-11.fc39.noarch. 76 kB/s | 21 kB 00:00
(33/154): alternatives-1.25-1.fc39.ppc64le.rpm 132 kB/s | 41 kB 00:00
(34/154): audit-libs-3.1.2-4.fc40.ppc64le.rpm 323 kB/s | 132 kB 00:00
(35/154): authselect-1.4.2-3.fc39.ppc64le.rpm 561 kB/s | 145 kB 00:00
(36/154): authselect-libs-1.4.2-3.fc39.ppc64le. 921 kB/s | 253 kB 00:00
(37/154): basesystem-11-18.fc39.noarch.rpm 32 kB/s | 7.2 kB 00:00
(38/154): bash-5.2.15-5.fc39.ppc64le.rpm 5.5 MB/s | 1.9 MB 00:00
(39/154): binutils-gold-2.41-5.fc40.ppc64le.rpm 3.5 MB/s | 1.1 MB 00:00
(40/154): bzip2-1.0.8-16.fc39.ppc64le.rpm 675 kB/s | 53 kB 00:00
(41/154): bzip2-libs-1.0.8-16.fc39.ppc64le.rpm 576 kB/s | 47 kB 00:00
(42/154): binutils-2.41-5.fc40.ppc64le.rpm 13 MB/s | 6.4 MB 00:00
(43/154): ca-certificates-2023.2.60_v7.0.306-3. 5.9 MB/s | 837 kB 00:00
(44/154): cpio-2.14-4.fc39.ppc64le.rpm 3.0 MB/s | 286 kB 00:00
(45/154): coreutils-common-9.4-1.fc40.ppc64le.r 18 MB/s | 2.1 MB 00:00
(46/154): coreutils-9.4-1.fc40.ppc64le.rpm 7.8 MB/s | 1.4 MB 00:00
(47/154): debugedit-5.0-10.fc39.ppc64le.rpm 1.2 MB/s | 80 kB 00:00
(48/154): crypto-policies-20230731-1.git5ed06e0 1.1 MB/s | 99 kB 00:00
(49/154): diffutils-3.10-3.fc39.ppc64le.rpm 4.3 MB/s | 408 kB 00:00
(50/154): ed-1.19-4.fc39.ppc64le.rpm 1.2 MB/s | 81 kB 00:00
(51/154): dwz-0.15-3.fc39.ppc64le.rpm 1.9 MB/s | 147 kB 00:00
(52/154): efi-srpm-macros-5-9.fc39.noarch.rpm 335 kB/s | 22 kB 00:00
(53/154): fedora-gpg-keys-40-0.1.noarch.rpm 1.8 MB/s | 130 kB 00:00
(54/154): fedora-release-40-0.7.noarch.rpm 121 kB/s | 8.0 kB 00:00
(55/154): fedora-release-common-40-0.7.noarch.r 214 kB/s | 18 kB 00:00
(56/154): fedora-release-identity-basic-40-0.7. 133 kB/s | 8.8 kB 00:00
(57/154): fedora-repos-40-0.1.noarch.rpm 142 kB/s | 9.4 kB 00:00
(58/154): fedora-repos-rawhide-40-0.1.noarch.rp 65 kB/s | 9.0 kB 00:00
(59/154): findutils-4.9.0-6.fc40.ppc64le.rpm 3.9 MB/s | 540 kB 00:00
(60/154): filesystem-3.18-6.fc39.ppc64le.rpm 6.1 MB/s | 1.1 MB 00:00
(61/154): fonts-srpm-macros-2.0.5-12.fc39.noarc 399 kB/s | 26 kB 00:00
(62/154): forge-srpm-macros-0.1.0-1.fc40.noarch 275 kB/s | 18 kB 00:00
(63/154): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 99 kB/s | 7.4 kB 00:00
(64/154): gawk-5.2.2-2.fc39.ppc64le.rpm 9.7 MB/s | 1.1 MB 00:00
(65/154): gdbm-libs-1.23-4.fc39.ppc64le.rpm 924 kB/s | 62 kB 00:00
(66/154): ghc-srpm-macros-1.6.1-2.fc39.noarch.r 117 kB/s | 7.8 kB 00:00
(67/154): gdb-minimal-13.2-8.fc40.ppc64le.rpm 19 MB/s | 4.2 MB 00:00
(68/154): gmp-6.2.1-5.fc39.ppc64le.rpm 2.9 MB/s | 304 kB 00:00
(69/154): gnat-srpm-macros-6-3.fc39.noarch.rpm 114 kB/s | 8.8 kB 00:00
(70/154): go-srpm-macros-3.2.0-7.fc40.noarch.rp 411 kB/s | 27 kB 00:00
(71/154): grep-3.11-5.fc40.ppc64le.rpm 4.0 MB/s | 308 kB 00:00
(72/154): gzip-1.12-6.fc39.ppc64le.rpm 2.0 MB/s | 170 kB 00:00
(73/154): info-7.0.3-3.fc39.ppc64le.rpm 2.8 MB/s | 200 kB 00:00
(74/154): jansson-2.13.1-7.fc39.ppc64le.rpm 734 kB/s | 49 kB 00:00
(75/154): kernel-srpm-macros-1.0-20.fc39.noarch 158 kB/s | 10 kB 00:00
(76/154): keyutils-libs-1.6.1-7.fc39.ppc64le.rp 388 kB/s | 32 kB 00:00
(77/154): krb5-libs-1.21.2-1.fc40.ppc64le.rpm 9.2 MB/s | 850 kB 00:00
(78/154): libattr-2.5.1-9.fc40.ppc64le.rpm 280 kB/s | 19 kB 00:00
(79/154): libacl-2.3.1-9.fc40.ppc64le.rpm 224 kB/s | 26 kB 00:00
(80/154): libbrotli-1.1.0-1.fc40.ppc64le.rpm 3.8 MB/s | 380 kB 00:00
(81/154): libcap-2.48-7.fc39.ppc64le.rpm 1.1 MB/s | 73 kB 00:00
(82/154): libcap-ng-0.8.3-8.fc40.ppc64le.rpm 354 kB/s | 33 kB 00:00
(83/154): libcom_err-1.47.0-2.fc39.ppc64le.rpm 358 kB/s | 27 kB 00:00
(84/154): libeconf-0.5.2-1.fc40.ppc64le.rpm 512 kB/s | 34 kB 00:00
(85/154): libevent-2.1.12-9.fc39.ppc64le.rpm 3.1 MB/s | 275 kB 00:00
(86/154): libffi-3.4.4-4.fc39.ppc64le.rpm 571 kB/s | 38 kB 00:00
(87/154): libgcc-13.2.1-1.fc39.ppc64le.rpm 1.5 MB/s | 104 kB 00:00
(88/154): libidn2-2.3.4-3.fc39.ppc64le.rpm 1.7 MB/s | 121 kB 00:00
(89/154): libnsl2-2.0.0-6.fc39.ppc64le.rpm 481 kB/s | 32 kB 00:00
(90/154): libgomp-13.2.1-1.fc39.ppc64le.rpm 3.4 MB/s | 332 kB 00:00
(91/154): libpkgconf-1.9.5-2.fc39.ppc64le.rpm 570 kB/s | 42 kB 00:00
(92/154): libpwquality-1.4.5-6.fc39.ppc64le.rpm 1.7 MB/s | 123 kB 00:00
(93/154): librtas-2.0.4-3.fc39.ppc64le.rpm 1.0 MB/s | 70 kB 00:00
(94/154): libselinux-3.5-5.fc39.ppc64le.rpm 1.4 MB/s | 100 kB 00:00
(95/154): libpsl-0.21.2-4.fc39.ppc64le.rpm 416 kB/s | 65 kB 00:00
(96/154): libsemanage-3.5-4.fc39.ppc64le.rpm 1.8 MB/s | 131 kB 00:00
(97/154): libsepol-3.5-2.fc39.ppc64le.rpm 4.7 MB/s | 356 kB 00:00
(98/154): libsigsegv-2.14-5.fc39.ppc64le.rpm 414 kB/s | 28 kB 00:00
(99/154): libssh-0.10.5-2.fc39.ppc64le.rpm 2.9 MB/s | 238 kB 00:00
(100/154): libssh-config-0.10.5-2.fc39.noarch.r 139 kB/s | 9.2 kB 00:00
(101/154): libstdc++-13.2.1-1.fc39.ppc64le.rpm 12 MB/s | 994 kB 00:00
(102/154): libtasn1-4.19.0-3.fc39.ppc64le.rpm 1.1 MB/s | 80 kB 00:00
(103/154): libtirpc-1.3.3-1.rc2.fc39.ppc64le.rp 1.5 MB/s | 108 kB 00:00
(104/154): libunistring-1.1-5.fc40.ppc64le.rpm 6.2 MB/s | 578 kB 00:00
(105/154): libverto-0.3.2-6.fc39.ppc64le.rpm 289 kB/s | 22 kB 00:00
(106/154): libutempter-1.2.1-10.fc39.ppc64le.rp 309 kB/s | 27 kB 00:00
(107/154): libxcrypt-4.4.36-2.fc39.ppc64le.rpm 1.7 MB/s | 132 kB 00:00
(108/154): lua-libs-5.4.6-3.fc39.ppc64le.rpm 2.1 MB/s | 149 kB 00:00
(109/154): lua-srpm-macros-1-9.fc39.noarch.rpm 131 kB/s | 8.6 kB 00:00
(110/154): lz4-libs-1.9.4-4.fc39.ppc64le.rpm 1.0 MB/s | 85 kB 00:00
(111/154): mpfr-4.2.0-3.fc39.ppc64le.rpm 4.7 MB/s | 353 kB 00:00
(112/154): ncurses-base-6.4-7.20230520.fc40.noa 1.1 MB/s | 88 kB 00:00
(113/154): ncurses-libs-6.4-7.20230520.fc40.ppc 5.2 MB/s | 380 kB 00:00
(114/154): ocaml-srpm-macros-8-2.fc39.noarch.rp 202 kB/s | 14 kB 00:00
(115/154): openblas-srpm-macros-2-14.fc39.noarc 67 kB/s | 7.5 kB 00:00
(116/154): p11-kit-0.25.0-2.fc39.ppc64le.rpm 6.2 MB/s | 500 kB 00:00
(117/154): openldap-2.6.6-1.fc39.ppc64le.rpm 2.9 MB/s | 287 kB 00:00
(118/154): p11-kit-trust-0.25.0-2.fc39.ppc64le. 1.9 MB/s | 156 kB 00:00
(119/154): package-notes-srpm-macros-0.5-9.fc39 168 kB/s | 11 kB 00:00
(120/154): pam-1.5.3-2.fc39.ppc64le.rpm 5.8 MB/s | 592 kB 00:00
(121/154): pam-libs-1.5.3-2.fc39.ppc64le.rpm 957 kB/s | 64 kB 00:00
(122/154): patch-2.7.6-22.fc39.ppc64le.rpm 1.5 MB/s | 137 kB 00:00
(123/154): pcre2-10.42-1.fc39.2.ppc64le.rpm 3.1 MB/s | 241 kB 00:00
(124/154): pcre2-syntax-10.42-1.fc39.2.noarch.r 2.0 MB/s | 143 kB 00:00
(125/154): perl-srpm-macros-1-51.fc39.noarch.rp 97 kB/s | 8.0 kB 00:00
(126/154): pkgconf-m4-1.9.5-2.fc39.noarch.rpm 170 kB/s | 14 kB 00:00
(127/154): pkgconf-1.9.5-2.fc39.ppc64le.rpm 423 kB/s | 43 kB 00:00
(128/154): pkgconf-pkg-config-1.9.5-2.fc39.ppc6 102 kB/s | 9.6 kB 00:00
(129/154): publicsuffix-list-dafsa-20230812-1.f 858 kB/s | 57 kB 00:00
(130/154): popt-1.19-3.fc39.ppc64le.rpm 818 kB/s | 71 kB 00:00
(131/154): pyproject-srpm-macros-1.9.0-2.fc39.n 211 kB/s | 14 kB 00:00
(132/154): python-srpm-macros-3.12-4.fc40.noarc 375 kB/s | 25 kB 00:00
(133/154): qt5-srpm-macros-5.15.10-2.fc39.noarc 126 kB/s | 8.3 kB 00:00
(134/154): readline-8.2-4.fc39.ppc64le.rpm 3.1 MB/s | 229 kB 00:00
(135/154): qt6-srpm-macros-6.5.2-2.fc39.noarch. 102 kB/s | 9.2 kB 00:00
(136/154): rpm-4.18.99-1.fc40.ppc64le.rpm 5.5 MB/s | 537 kB 00:00
(137/154): rpm-build-4.18.99-1.fc40.ppc64le.rpm 1.2 MB/s | 80 kB 00:00
(138/154): rpm-build-libs-4.18.99-1.fc40.ppc64l 1.2 MB/s | 103 kB 00:00
(139/154): rpm-libs-4.18.99-1.fc40.ppc64le.rpm 4.6 MB/s | 356 kB 00:00
(140/154): rpm-sequoia-1.5.0-1.fc40.ppc64le.rpm 15 MB/s | 1.7 MB 00:00
(141/154): sed-4.8-14.fc39.ppc64le.rpm 3.7 MB/s | 312 kB 00:00
(142/154): setup-2.14.4-1.fc39.noarch.rpm 2.0 MB/s | 154 kB 00:00
(143/154): rust-srpm-macros-24-5.fc40.noarch.rp 70 kB/s | 12 kB 00:00
(144/154): shadow-utils-4.14.0-1.fc40.ppc64le.r 10 MB/s | 1.3 MB 00:00
(145/154): systemd-libs-254.1-2.fc40.ppc64le.rp 9.3 MB/s | 733 kB 00:00
(146/154): sqlite-libs-3.43.1-1.fc40.ppc64le.rp 8.6 MB/s | 798 kB 00:00
(147/154): tar-1.35-2.fc40.ppc64le.rpm 8.9 MB/s | 884 kB 00:00
(148/154): unzip-6.0-62.fc39.ppc64le.rpm 2.3 MB/s | 190 kB 00:00
(149/154): tzdata-2023c-3.fc40.noarch.rpm 7.3 MB/s | 718 kB 00:00
(150/154): which-2.21-40.fc39.ppc64le.rpm 555 kB/s | 43 kB 00:00
(151/154): xxhash-libs-0.8.2-1.fc39.ppc64le.rpm 450 kB/s | 37 kB 00:00
(152/154): xz-5.4.4-1.fc39.ppc64le.rpm 6.1 MB/s | 559 kB 00:00
(153/154): xz-libs-5.4.4-1.fc39.ppc64le.rpm 1.7 MB/s | 121 kB 00:00
(154/154): zip-3.0-38.fc39.ppc64le.rpm 3.7 MB/s | 274 kB 00:00
--------------------------------------------------------------------------------
Total 12 MB/s | 57 MB 00:04
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0xA15B79CC:
Userid : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
Key imported successfully
fedora 1.6 MB/s | 1.6 kB 00:00
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0x18B8E74C:
Userid : "Fedora (39) <fedora-39-primary@fedoraproject.org>"
Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Running scriptlet: filesystem-3.18-6.fc39.ppc64le 1/1
Preparing : 1/1
Installing : libgcc-13.2.1-1.fc39.ppc64le 1/154
Running scriptlet: libgcc-13.2.1-1.fc39.ppc64le 1/154
Installing : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/154
Running scriptlet: crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/154
Installing : tzdata-2023c-3.fc40.noarch 3/154
Installing : fedora-release-identity-basic-40-0.7.noarch 4/154
Installing : fedora-repos-rawhide-40-0.1.noarch 5/154
Installing : fedora-gpg-keys-40-0.1.noarch 6/154
Installing : fedora-repos-40-0.1.noarch 7/154
Installing : fedora-release-common-40-0.7.noarch 8/154
Installing : fedora-release-40-0.7.noarch 9/154
Installing : setup-2.14.4-1.fc39.noarch 10/154
warning: /etc/hosts created as /etc/hosts.rpmnew
Running scriptlet: setup-2.14.4-1.fc39.noarch 10/154
Installing : filesystem-3.18-6.fc39.ppc64le 11/154
Installing : basesystem-11-18.fc39.noarch 12/154
Installing : rust-srpm-macros-24-5.fc40.noarch 13/154
Installing : qt6-srpm-macros-6.5.2-2.fc39.noarch 14/154
Installing : qt5-srpm-macros-5.15.10-2.fc39.noarch 15/154
Installing : pyproject-srpm-macros-1.9.0-2.fc39.noarch 16/154
Installing : publicsuffix-list-dafsa-20230812-1.fc40.noarch 17/154
Installing : pkgconf-m4-1.9.5-2.fc39.noarch 18/154
Installing : perl-srpm-macros-1-51.fc39.noarch 19/154
Installing : pcre2-syntax-10.42-1.fc39.2.noarch 20/154
Installing : package-notes-srpm-macros-0.5-9.fc39.noarch 21/154
Installing : openblas-srpm-macros-2-14.fc39.noarch 22/154
Installing : ocaml-srpm-macros-8-2.fc39.noarch 23/154
Installing : ncurses-base-6.4-7.20230520.fc40.noarch 24/154
Installing : glibc-gconv-extra-2.38.9000-8.fc40.ppc64le 25/154
Running scriptlet: glibc-gconv-extra-2.38.9000-8.fc40.ppc64le 25/154
Installing : glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le 26/154
Installing : glibc-common-2.38.9000-8.fc40.ppc64le 27/154
Running scriptlet: glibc-2.38.9000-8.fc40.ppc64le 28/154
Installing : glibc-2.38.9000-8.fc40.ppc64le 28/154
Running scriptlet: glibc-2.38.9000-8.fc40.ppc64le 28/154
Installing : ncurses-libs-6.4-7.20230520.fc40.ppc64le 29/154
Installing : bash-5.2.15-5.fc39.ppc64le 30/154
Running scriptlet: bash-5.2.15-5.fc39.ppc64le 30/154
Installing : zlib-ng-compat-2.1.3-3.fc40.ppc64le 31/154
Installing : xz-libs-5.4.4-1.fc39.ppc64le 32/154
Installing : bzip2-libs-1.0.8-16.fc39.ppc64le 33/154
Installing : libuuid-2.39.2-1.fc40.ppc64le 34/154
Installing : libzstd-1.5.5-4.fc40.ppc64le 35/154
Installing : elfutils-libelf-0.189-6.fc40.ppc64le 36/154
Installing : libstdc++-13.2.1-1.fc39.ppc64le 37/154
Installing : popt-1.19-3.fc39.ppc64le 38/154
Installing : libblkid-2.39.2-1.fc40.ppc64le 39/154
Installing : readline-8.2-4.fc39.ppc64le 40/154
Installing : gmp-1:6.2.1-5.fc39.ppc64le 41/154
Installing : libattr-2.5.1-9.fc40.ppc64le 42/154
Installing : libacl-2.3.1-9.fc40.ppc64le 43/154
Installing : libcap-2.48-7.fc39.ppc64le 44/154
Installing : libxcrypt-4.4.36-2.fc39.ppc64le 45/154
Installing : lz4-libs-1.9.4-4.fc39.ppc64le 46/154
Installing : systemd-libs-254.1-2.fc40.ppc64le 47/154
Installing : mpfr-4.2.0-3.fc39.ppc64le 48/154
Installing : dwz-0.15-3.fc39.ppc64le 49/154
Installing : unzip-6.0-62.fc39.ppc64le 50/154
Installing : file-libs-5.45-1.fc40.ppc64le 51/154
Installing : file-5.45-1.fc40.ppc64le 52/154
Installing : libsmartcols-2.39.2-1.fc40.ppc64le 53/154
Installing : alternatives-1.25-1.fc39.ppc64le 54/154
Installing : jansson-2.13.1-7.fc39.ppc64le 55/154
Installing : libcap-ng-0.8.3-8.fc40.ppc64le 56/154
Installing : audit-libs-3.1.2-4.fc40.ppc64le 57/154
Installing : pam-libs-1.5.3-2.fc39.ppc64le 58/154
Installing : libcom_err-1.47.0-2.fc39.ppc64le 59/154
Installing : libsepol-3.5-2.fc39.ppc64le 60/154
Installing : libunistring-1.1-5.fc40.ppc64le 61/154
Installing : libidn2-2.3.4-3.fc39.ppc64le 62/154
Installing : lua-libs-5.4.6-3.fc39.ppc64le 63/154
Installing : pcre2-10.42-1.fc39.2.ppc64le 64/154
Installing : libselinux-3.5-5.fc39.ppc64le 65/154
Installing : sed-4.8-14.fc39.ppc64le 66/154
Installing : grep-3.11-5.fc40.ppc64le 67/154
Installing : findutils-1:4.9.0-6.fc40.ppc64le 68/154
Installing : xz-5.4.4-1.fc39.ppc64le 69/154
Installing : libmount-2.39.2-1.fc40.ppc64le 70/154
Installing : util-linux-core-2.39.2-1.fc40.ppc64le 71/154
Installing : libsemanage-3.5-4.fc39.ppc64le 72/154
Installing : tar-2:1.35-2.fc40.ppc64le 73/154
Installing : libpsl-0.21.2-4.fc39.ppc64le 74/154
Installing : zip-3.0-38.fc39.ppc64le 75/154
Installing : zstd-1.5.5-4.fc40.ppc64le 76/154
Installing : libfdisk-2.39.2-1.fc40.ppc64le 77/154
Installing : bzip2-1.0.8-16.fc39.ppc64le 78/154
Installing : libxml2-2.11.5-1.fc40.ppc64le 79/154
Installing : sqlite-libs-3.43.1-1.fc40.ppc64le 80/154
Installing : elfutils-default-yama-scope-0.189-6.fc40.noarch 81/154
Running scriptlet: elfutils-default-yama-scope-0.189-6.fc40.noarch 81/154
Installing : ed-1.19-4.fc39.ppc64le 82/154
Installing : patch-2.7.6-22.fc39.ppc64le 83/154
Installing : libdb-5.3.28-58.fc40.ppc64le 84/154
Installing : libnghttp2-1.56.0-1.fc40.ppc64le 85/154
Installing : cpio-2.14-4.fc39.ppc64le 86/154
Installing : diffutils-3.10-3.fc39.ppc64le 87/154
Installing : gdbm-libs-1:1.23-4.fc39.ppc64le 88/154
Installing : cyrus-sasl-lib-2.1.28-11.fc40.ppc64le 89/154
Installing : keyutils-libs-1.6.1-7.fc39.ppc64le 90/154
Installing : libbrotli-1.1.0-1.fc40.ppc64le 91/154
Installing : libeconf-0.5.2-1.fc40.ppc64le 92/154
Installing : shadow-utils-2:4.14.0-1.fc40.ppc64le 93/154
Running scriptlet: libutempter-1.2.1-10.fc39.ppc64le 94/154
Installing : libutempter-1.2.1-10.fc39.ppc64le 94/154
Installing : libffi-3.4.4-4.fc39.ppc64le 95/154
Installing : p11-kit-0.25.0-2.fc39.ppc64le 96/154
Installing : libgomp-13.2.1-1.fc39.ppc64le 97/154
Installing : libpkgconf-1.9.5-2.fc39.ppc64le 98/154
Installing : pkgconf-1.9.5-2.fc39.ppc64le 99/154
Installing : pkgconf-pkg-config-1.9.5-2.fc39.ppc64le 100/154
Installing : librtas-2.0.4-3.fc39.ppc64le 101/154
Running scriptlet: librtas-2.0.4-3.fc39.ppc64le 101/154
Installing : libsigsegv-2.14-5.fc39.ppc64le 102/154
Installing : gawk-5.2.2-2.fc39.ppc64le 103/154
Installing : libtasn1-4.19.0-3.fc39.ppc64le 104/154
Installing : p11-kit-trust-0.25.0-2.fc39.ppc64le 105/154
Running scriptlet: p11-kit-trust-0.25.0-2.fc39.ppc64le 105/154
Installing : libverto-0.3.2-6.fc39.ppc64le 106/154
Installing : xxhash-libs-0.8.2-1.fc39.ppc64le 107/154
Installing : libssh-config-0.10.5-2.fc39.noarch 108/154
Installing : kernel-srpm-macros-1.0-20.fc39.noarch 109/154
Installing : gnat-srpm-macros-6-3.fc39.noarch 110/154
Installing : ghc-srpm-macros-1.6.1-2.fc39.noarch 111/154
Installing : fpc-srpm-macros-1.3-8.fc39.noarch 112/154
Installing : coreutils-common-9.4-1.fc40.ppc64le 113/154
Installing : openssl-libs-1:3.1.1-4.fc40.ppc64le 114/154
Installing : coreutils-9.4-1.fc40.ppc64le 115/154
Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 116/154
Installing : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 116/154
Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 116/154
Installing : krb5-libs-1.21.2-1.fc40.ppc64le 117/154
Installing : libtirpc-1.3.3-1.rc2.fc39.ppc64le 118/154
Running scriptlet: authselect-libs-1.4.2-3.fc39.ppc64le 119/154
Installing : authselect-libs-1.4.2-3.fc39.ppc64le 119/154
Installing : gzip-1.12-6.fc39.ppc64le 120/154
Installing : cracklib-2.9.11-2.fc40.ppc64le 121/154
Installing : libpwquality-1.4.5-6.fc39.ppc64le 122/154
Installing : authselect-1.4.2-3.fc39.ppc64le 123/154
Installing : libnsl2-2.0.0-6.fc39.ppc64le 124/154
Installing : pam-1.5.3-2.fc39.ppc64le 125/154
Installing : libssh-0.10.5-2.fc39.ppc64le 126/154
Installing : libarchive-3.7.2-1.fc40.ppc64le 127/154
Installing : libevent-2.1.12-9.fc39.ppc64le 128/154
Installing : openldap-2.6.6-1.fc39.ppc64le 129/154
Installing : libcurl-8.3.0-1.fc40.ppc64le 130/154
Installing : elfutils-libs-0.189-6.fc40.ppc64le 131/154
Installing : elfutils-debuginfod-client-0.189-6.fc40.ppc64le 132/154
Installing : binutils-gold-2.41-5.fc40.ppc64le 133/154
Running scriptlet: binutils-gold-2.41-5.fc40.ppc64le 133/154
Installing : binutils-2.41-5.fc40.ppc64le 134/154
Running scriptlet: binutils-2.41-5.fc40.ppc64le 134/154
Installing : elfutils-0.189-6.fc40.ppc64le 135/154
Installing : gdb-minimal-13.2-8.fc40.ppc64le 136/154
Installing : debugedit-5.0-10.fc39.ppc64le 137/154
Installing : curl-8.3.0-1.fc40.ppc64le 138/154
Installing : rpm-sequoia-1.5.0-1.fc40.ppc64le 139/154
Installing : rpm-libs-4.18.99-1.fc40.ppc64le 140/154
Running scriptlet: rpm-4.18.99-1.fc40.ppc64le 141/154
Installing : rpm-4.18.99-1.fc40.ppc64le 141/154
Installing : efi-srpm-macros-5-9.fc39.noarch 142/154
Installing : lua-srpm-macros-1-9.fc39.noarch 143/154
Installing : rpm-build-libs-4.18.99-1.fc40.ppc64le 144/154
Installing : ansible-srpm-macros-1-11.fc39.noarch 145/154
Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 146/154
Installing : forge-srpm-macros-0.1.0-1.fc40.noarch 147/154
Installing : go-srpm-macros-3.2.0-7.fc40.noarch 148/154
Installing : python-srpm-macros-3.12-4.fc40.noarch 149/154
Installing : redhat-rpm-config-270-1.fc40.noarch 150/154
Installing : rpm-build-4.18.99-1.fc40.ppc64le 151/154
Installing : util-linux-2.39.2-1.fc40.ppc64le 152/154
Installing : which-2.21-40.fc39.ppc64le 153/154
Installing : info-7.0.3-3.fc39.ppc64le 154/154
Running scriptlet: filesystem-3.18-6.fc39.ppc64le 154/154
Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 154/154
Running scriptlet: authselect-libs-1.4.2-3.fc39.ppc64le 154/154
Running scriptlet: rpm-4.18.99-1.fc40.ppc64le 154/154
Running scriptlet: info-7.0.3-3.fc39.ppc64le 154/154
Verifying : cracklib-2.9.11-2.fc40.ppc64le 1/154
Verifying : curl-8.3.0-1.fc40.ppc64le 2/154
Verifying : cyrus-sasl-lib-2.1.28-11.fc40.ppc64le 3/154
Verifying : elfutils-0.189-6.fc40.ppc64le 4/154
Verifying : elfutils-debuginfod-client-0.189-6.fc40.ppc64le 5/154
Verifying : elfutils-default-yama-scope-0.189-6.fc40.noarch 6/154
Verifying : elfutils-libelf-0.189-6.fc40.ppc64le 7/154
Verifying : elfutils-libs-0.189-6.fc40.ppc64le 8/154
Verifying : file-5.45-1.fc40.ppc64le 9/154
Verifying : file-libs-5.45-1.fc40.ppc64le 10/154
Verifying : glibc-2.38.9000-8.fc40.ppc64le 11/154
Verifying : glibc-common-2.38.9000-8.fc40.ppc64le 12/154
Verifying : glibc-gconv-extra-2.38.9000-8.fc40.ppc64le 13/154
Verifying : glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le 14/154
Verifying : libarchive-3.7.2-1.fc40.ppc64le 15/154
Verifying : libblkid-2.39.2-1.fc40.ppc64le 16/154
Verifying : libcurl-8.3.0-1.fc40.ppc64le 17/154
Verifying : libdb-5.3.28-58.fc40.ppc64le 18/154
Verifying : libfdisk-2.39.2-1.fc40.ppc64le 19/154
Verifying : libmount-2.39.2-1.fc40.ppc64le 20/154
Verifying : libnghttp2-1.56.0-1.fc40.ppc64le 21/154
Verifying : libsmartcols-2.39.2-1.fc40.ppc64le 22/154
Verifying : libuuid-2.39.2-1.fc40.ppc64le 23/154
Verifying : libxml2-2.11.5-1.fc40.ppc64le 24/154
Verifying : libzstd-1.5.5-4.fc40.ppc64le 25/154
Verifying : openssl-libs-1:3.1.1-4.fc40.ppc64le 26/154
Verifying : redhat-rpm-config-270-1.fc40.noarch 27/154
Verifying : util-linux-2.39.2-1.fc40.ppc64le 28/154
Verifying : util-linux-core-2.39.2-1.fc40.ppc64le 29/154
Verifying : zlib-ng-compat-2.1.3-3.fc40.ppc64le 30/154
Verifying : zstd-1.5.5-4.fc40.ppc64le 31/154
Verifying : alternatives-1.25-1.fc39.ppc64le 32/154
Verifying : ansible-srpm-macros-1-11.fc39.noarch 33/154
Verifying : audit-libs-3.1.2-4.fc40.ppc64le 34/154
Verifying : authselect-1.4.2-3.fc39.ppc64le 35/154
Verifying : authselect-libs-1.4.2-3.fc39.ppc64le 36/154
Verifying : basesystem-11-18.fc39.noarch 37/154
Verifying : bash-5.2.15-5.fc39.ppc64le 38/154
Verifying : binutils-2.41-5.fc40.ppc64le 39/154
Verifying : binutils-gold-2.41-5.fc40.ppc64le 40/154
Verifying : bzip2-1.0.8-16.fc39.ppc64le 41/154
Verifying : bzip2-libs-1.0.8-16.fc39.ppc64le 42/154
Verifying : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 43/154
Verifying : coreutils-9.4-1.fc40.ppc64le 44/154
Verifying : coreutils-common-9.4-1.fc40.ppc64le 45/154
Verifying : cpio-2.14-4.fc39.ppc64le 46/154
Verifying : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 47/154
Verifying : debugedit-5.0-10.fc39.ppc64le 48/154
Verifying : diffutils-3.10-3.fc39.ppc64le 49/154
Verifying : dwz-0.15-3.fc39.ppc64le 50/154
Verifying : ed-1.19-4.fc39.ppc64le 51/154
Verifying : efi-srpm-macros-5-9.fc39.noarch 52/154
Verifying : fedora-gpg-keys-40-0.1.noarch 53/154
Verifying : fedora-release-40-0.7.noarch 54/154
Verifying : fedora-release-common-40-0.7.noarch 55/154
Verifying : fedora-release-identity-basic-40-0.7.noarch 56/154
Verifying : fedora-repos-40-0.1.noarch 57/154
Verifying : fedora-repos-rawhide-40-0.1.noarch 58/154
Verifying : filesystem-3.18-6.fc39.ppc64le 59/154
Verifying : findutils-1:4.9.0-6.fc40.ppc64le 60/154
Verifying : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 61/154
Verifying : forge-srpm-macros-0.1.0-1.fc40.noarch 62/154
Verifying : fpc-srpm-macros-1.3-8.fc39.noarch 63/154
Verifying : gawk-5.2.2-2.fc39.ppc64le 64/154
Verifying : gdb-minimal-13.2-8.fc40.ppc64le 65/154
Verifying : gdbm-libs-1:1.23-4.fc39.ppc64le 66/154
Verifying : ghc-srpm-macros-1.6.1-2.fc39.noarch 67/154
Verifying : gmp-1:6.2.1-5.fc39.ppc64le 68/154
Verifying : gnat-srpm-macros-6-3.fc39.noarch 69/154
Verifying : go-srpm-macros-3.2.0-7.fc40.noarch 70/154
Verifying : grep-3.11-5.fc40.ppc64le 71/154
Verifying : gzip-1.12-6.fc39.ppc64le 72/154
Verifying : info-7.0.3-3.fc39.ppc64le 73/154
Verifying : jansson-2.13.1-7.fc39.ppc64le 74/154
Verifying : kernel-srpm-macros-1.0-20.fc39.noarch 75/154
Verifying : keyutils-libs-1.6.1-7.fc39.ppc64le 76/154
Verifying : krb5-libs-1.21.2-1.fc40.ppc64le 77/154
Verifying : libacl-2.3.1-9.fc40.ppc64le 78/154
Verifying : libattr-2.5.1-9.fc40.ppc64le 79/154
Verifying : libbrotli-1.1.0-1.fc40.ppc64le 80/154
Verifying : libcap-2.48-7.fc39.ppc64le 81/154
Verifying : libcap-ng-0.8.3-8.fc40.ppc64le 82/154
Verifying : libcom_err-1.47.0-2.fc39.ppc64le 83/154
Verifying : libeconf-0.5.2-1.fc40.ppc64le 84/154
Verifying : libevent-2.1.12-9.fc39.ppc64le 85/154
Verifying : libffi-3.4.4-4.fc39.ppc64le 86/154
Verifying : libgcc-13.2.1-1.fc39.ppc64le 87/154
Verifying : libgomp-13.2.1-1.fc39.ppc64le 88/154
Verifying : libidn2-2.3.4-3.fc39.ppc64le 89/154
Verifying : libnsl2-2.0.0-6.fc39.ppc64le 90/154
Verifying : libpkgconf-1.9.5-2.fc39.ppc64le 91/154
Verifying : libpsl-0.21.2-4.fc39.ppc64le 92/154
Verifying : libpwquality-1.4.5-6.fc39.ppc64le 93/154
Verifying : librtas-2.0.4-3.fc39.ppc64le 94/154
Verifying : libselinux-3.5-5.fc39.ppc64le 95/154
Verifying : libsemanage-3.5-4.fc39.ppc64le 96/154
Verifying : libsepol-3.5-2.fc39.ppc64le 97/154
Verifying : libsigsegv-2.14-5.fc39.ppc64le 98/154
Verifying : libssh-0.10.5-2.fc39.ppc64le 99/154
Verifying : libssh-config-0.10.5-2.fc39.noarch 100/154
Verifying : libstdc++-13.2.1-1.fc39.ppc64le 101/154
Verifying : libtasn1-4.19.0-3.fc39.ppc64le 102/154
Verifying : libtirpc-1.3.3-1.rc2.fc39.ppc64le 103/154
Verifying : libunistring-1.1-5.fc40.ppc64le 104/154
Verifying : libutempter-1.2.1-10.fc39.ppc64le 105/154
Verifying : libverto-0.3.2-6.fc39.ppc64le 106/154
Verifying : libxcrypt-4.4.36-2.fc39.ppc64le 107/154
Verifying : lua-libs-5.4.6-3.fc39.ppc64le 108/154
Verifying : lua-srpm-macros-1-9.fc39.noarch 109/154
Verifying : lz4-libs-1.9.4-4.fc39.ppc64le 110/154
Verifying : mpfr-4.2.0-3.fc39.ppc64le 111/154
Verifying : ncurses-base-6.4-7.20230520.fc40.noarch 112/154
Verifying : ncurses-libs-6.4-7.20230520.fc40.ppc64le 113/154
Verifying : ocaml-srpm-macros-8-2.fc39.noarch 114/154
Verifying : openblas-srpm-macros-2-14.fc39.noarch 115/154
Verifying : openldap-2.6.6-1.fc39.ppc64le 116/154
Verifying : p11-kit-0.25.0-2.fc39.ppc64le 117/154
Verifying : p11-kit-trust-0.25.0-2.fc39.ppc64le 118/154
Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 119/154
Verifying : pam-1.5.3-2.fc39.ppc64le 120/154
Verifying : pam-libs-1.5.3-2.fc39.ppc64le 121/154
Verifying : patch-2.7.6-22.fc39.ppc64le 122/154
Verifying : pcre2-10.42-1.fc39.2.ppc64le 123/154
Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 124/154
Verifying : perl-srpm-macros-1-51.fc39.noarch 125/154
Verifying : pkgconf-1.9.5-2.fc39.ppc64le 126/154
Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 127/154
Verifying : pkgconf-pkg-config-1.9.5-2.fc39.ppc64le 128/154
Verifying : popt-1.19-3.fc39.ppc64le 129/154
Verifying : publicsuffix-list-dafsa-20230812-1.fc40.noarch 130/154
Verifying : pyproject-srpm-macros-1.9.0-2.fc39.noarch 131/154
Verifying : python-srpm-macros-3.12-4.fc40.noarch 132/154
Verifying : qt5-srpm-macros-5.15.10-2.fc39.noarch 133/154
Verifying : qt6-srpm-macros-6.5.2-2.fc39.noarch 134/154
Verifying : readline-8.2-4.fc39.ppc64le 135/154
Verifying : rpm-4.18.99-1.fc40.ppc64le 136/154
Verifying : rpm-build-4.18.99-1.fc40.ppc64le 137/154
Verifying : rpm-build-libs-4.18.99-1.fc40.ppc64le 138/154
Verifying : rpm-libs-4.18.99-1.fc40.ppc64le 139/154
Verifying : rpm-sequoia-1.5.0-1.fc40.ppc64le 140/154
Verifying : rust-srpm-macros-24-5.fc40.noarch 141/154
Verifying : sed-4.8-14.fc39.ppc64le 142/154
Verifying : setup-2.14.4-1.fc39.noarch 143/154
Verifying : shadow-utils-2:4.14.0-1.fc40.ppc64le 144/154
Verifying : sqlite-libs-3.43.1-1.fc40.ppc64le 145/154
Verifying : systemd-libs-254.1-2.fc40.ppc64le 146/154
Verifying : tar-2:1.35-2.fc40.ppc64le 147/154
Verifying : tzdata-2023c-3.fc40.noarch 148/154
Verifying : unzip-6.0-62.fc39.ppc64le 149/154
Verifying : which-2.21-40.fc39.ppc64le 150/154
Verifying : xxhash-libs-0.8.2-1.fc39.ppc64le 151/154
Verifying : xz-5.4.4-1.fc39.ppc64le 152/154
Verifying : xz-libs-5.4.4-1.fc39.ppc64le 153/154
Verifying : zip-3.0-38.fc39.ppc64le 154/154
Installed:
alternatives-1.25-1.fc39.ppc64le
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.ppc64le
authselect-1.4.2-3.fc39.ppc64le
authselect-libs-1.4.2-3.fc39.ppc64le
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.ppc64le
binutils-2.41-5.fc40.ppc64le
binutils-gold-2.41-5.fc40.ppc64le
bzip2-1.0.8-16.fc39.ppc64le
bzip2-libs-1.0.8-16.fc39.ppc64le
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.ppc64le
coreutils-common-9.4-1.fc40.ppc64le
cpio-2.14-4.fc39.ppc64le
cracklib-2.9.11-2.fc40.ppc64le
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.ppc64le
cyrus-sasl-lib-2.1.28-11.fc40.ppc64le
debugedit-5.0-10.fc39.ppc64le
diffutils-3.10-3.fc39.ppc64le
dwz-0.15-3.fc39.ppc64le
ed-1.19-4.fc39.ppc64le
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.ppc64le
elfutils-debuginfod-client-0.189-6.fc40.ppc64le
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.ppc64le
elfutils-libs-0.189-6.fc40.ppc64le
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.ppc64le
file-libs-5.45-1.fc40.ppc64le
filesystem-3.18-6.fc39.ppc64le
findutils-1:4.9.0-6.fc40.ppc64le
fonts-srpm-macros-1:2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.ppc64le
gdb-minimal-13.2-8.fc40.ppc64le
gdbm-libs-1:1.23-4.fc39.ppc64le
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-8.fc40.ppc64le
glibc-common-2.38.9000-8.fc40.ppc64le
glibc-gconv-extra-2.38.9000-8.fc40.ppc64le
glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le
gmp-1:6.2.1-5.fc39.ppc64le
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
grep-3.11-5.fc40.ppc64le
gzip-1.12-6.fc39.ppc64le
info-7.0.3-3.fc39.ppc64le
jansson-2.13.1-7.fc39.ppc64le
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.ppc64le
krb5-libs-1.21.2-1.fc40.ppc64le
libacl-2.3.1-9.fc40.ppc64le
libarchive-3.7.2-1.fc40.ppc64le
libattr-2.5.1-9.fc40.ppc64le
libblkid-2.39.2-1.fc40.ppc64le
libbrotli-1.1.0-1.fc40.ppc64le
libcap-2.48-7.fc39.ppc64le
libcap-ng-0.8.3-8.fc40.ppc64le
libcom_err-1.47.0-2.fc39.ppc64le
libcurl-8.3.0-1.fc40.ppc64le
libdb-5.3.28-58.fc40.ppc64le
libeconf-0.5.2-1.fc40.ppc64le
libevent-2.1.12-9.fc39.ppc64le
libfdisk-2.39.2-1.fc40.ppc64le
libffi-3.4.4-4.fc39.ppc64le
libgcc-13.2.1-1.fc39.ppc64le
libgomp-13.2.1-1.fc39.ppc64le
libidn2-2.3.4-3.fc39.ppc64le
libmount-2.39.2-1.fc40.ppc64le
libnghttp2-1.56.0-1.fc40.ppc64le
libnsl2-2.0.0-6.fc39.ppc64le
libpkgconf-1.9.5-2.fc39.ppc64le
libpsl-0.21.2-4.fc39.ppc64le
libpwquality-1.4.5-6.fc39.ppc64le
librtas-2.0.4-3.fc39.ppc64le
libselinux-3.5-5.fc39.ppc64le
libsemanage-3.5-4.fc39.ppc64le
libsepol-3.5-2.fc39.ppc64le
libsigsegv-2.14-5.fc39.ppc64le
libsmartcols-2.39.2-1.fc40.ppc64le
libssh-0.10.5-2.fc39.ppc64le
libssh-config-0.10.5-2.fc39.noarch
libstdc++-13.2.1-1.fc39.ppc64le
libtasn1-4.19.0-3.fc39.ppc64le
libtirpc-1.3.3-1.rc2.fc39.ppc64le
libunistring-1.1-5.fc40.ppc64le
libutempter-1.2.1-10.fc39.ppc64le
libuuid-2.39.2-1.fc40.ppc64le
libverto-0.3.2-6.fc39.ppc64le
libxcrypt-4.4.36-2.fc39.ppc64le
libxml2-2.11.5-1.fc40.ppc64le
libzstd-1.5.5-4.fc40.ppc64le
lua-libs-5.4.6-3.fc39.ppc64le
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.ppc64le
mpfr-4.2.0-3.fc39.ppc64le
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.ppc64le
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.ppc64le
openssl-libs-1:3.1.1-4.fc40.ppc64le
p11-kit-0.25.0-2.fc39.ppc64le
p11-kit-trust-0.25.0-2.fc39.ppc64le
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.ppc64le
pam-libs-1.5.3-2.fc39.ppc64le
patch-2.7.6-22.fc39.ppc64le
pcre2-10.42-1.fc39.2.ppc64le
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.ppc64le
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.ppc64le
popt-1.19-3.fc39.ppc64le
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.ppc64le
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.ppc64le
rpm-build-4.18.99-1.fc40.ppc64le
rpm-build-libs-4.18.99-1.fc40.ppc64le
rpm-libs-4.18.99-1.fc40.ppc64le
rpm-sequoia-1.5.0-1.fc40.ppc64le
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.ppc64le
setup-2.14.4-1.fc39.noarch
shadow-utils-2:4.14.0-1.fc40.ppc64le
sqlite-libs-3.43.1-1.fc40.ppc64le
systemd-libs-254.1-2.fc40.ppc64le
tar-2:1.35-2.fc40.ppc64le
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.ppc64le
util-linux-2.39.2-1.fc40.ppc64le
util-linux-core-2.39.2-1.fc40.ppc64le
which-2.21-40.fc39.ppc64le
xxhash-libs-0.8.2-1.fc39.ppc64le
xz-5.4.4-1.fc39.ppc64le
xz-libs-5.4.4-1.fc39.ppc64le
zip-3.0-38.fc39.ppc64le
zlib-ng-compat-2.1.3-3.fc40.ppc64le
zstd-1.5.5-4.fc40.ppc64le
Complete!
Finish: installing minimal buildroot with dnf
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.25-1.fc39.ppc64le
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.ppc64le
authselect-1.4.2-3.fc39.ppc64le
authselect-libs-1.4.2-3.fc39.ppc64le
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.ppc64le
binutils-2.41-5.fc40.ppc64le
binutils-gold-2.41-5.fc40.ppc64le
bzip2-1.0.8-16.fc39.ppc64le
bzip2-libs-1.0.8-16.fc39.ppc64le
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.ppc64le
coreutils-common-9.4-1.fc40.ppc64le
cpio-2.14-4.fc39.ppc64le
cracklib-2.9.11-2.fc40.ppc64le
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.ppc64le
cyrus-sasl-lib-2.1.28-11.fc40.ppc64le
debugedit-5.0-10.fc39.ppc64le
diffutils-3.10-3.fc39.ppc64le
dwz-0.15-3.fc39.ppc64le
ed-1.19-4.fc39.ppc64le
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.ppc64le
elfutils-debuginfod-client-0.189-6.fc40.ppc64le
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.ppc64le
elfutils-libs-0.189-6.fc40.ppc64le
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.ppc64le
file-libs-5.45-1.fc40.ppc64le
filesystem-3.18-6.fc39.ppc64le
findutils-4.9.0-6.fc40.ppc64le
fonts-srpm-macros-2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.ppc64le
gdb-minimal-13.2-8.fc40.ppc64le
gdbm-libs-1.23-4.fc39.ppc64le
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-8.fc40.ppc64le
glibc-common-2.38.9000-8.fc40.ppc64le
glibc-gconv-extra-2.38.9000-8.fc40.ppc64le
glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le
gmp-6.2.1-5.fc39.ppc64le
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
gpg-pubkey-18b8e74c-62f2920f
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-5.fc40.ppc64le
gzip-1.12-6.fc39.ppc64le
info-7.0.3-3.fc39.ppc64le
jansson-2.13.1-7.fc39.ppc64le
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.ppc64le
krb5-libs-1.21.2-1.fc40.ppc64le
libacl-2.3.1-9.fc40.ppc64le
libarchive-3.7.2-1.fc40.ppc64le
libattr-2.5.1-9.fc40.ppc64le
libblkid-2.39.2-1.fc40.ppc64le
libbrotli-1.1.0-1.fc40.ppc64le
libcap-2.48-7.fc39.ppc64le
libcap-ng-0.8.3-8.fc40.ppc64le
libcom_err-1.47.0-2.fc39.ppc64le
libcurl-8.3.0-1.fc40.ppc64le
libdb-5.3.28-58.fc40.ppc64le
libeconf-0.5.2-1.fc40.ppc64le
libevent-2.1.12-9.fc39.ppc64le
libfdisk-2.39.2-1.fc40.ppc64le
libffi-3.4.4-4.fc39.ppc64le
libgcc-13.2.1-1.fc39.ppc64le
libgomp-13.2.1-1.fc39.ppc64le
libidn2-2.3.4-3.fc39.ppc64le
libmount-2.39.2-1.fc40.ppc64le
libnghttp2-1.56.0-1.fc40.ppc64le
libnsl2-2.0.0-6.fc39.ppc64le
libpkgconf-1.9.5-2.fc39.ppc64le
libpsl-0.21.2-4.fc39.ppc64le
libpwquality-1.4.5-6.fc39.ppc64le
librtas-2.0.4-3.fc39.ppc64le
libselinux-3.5-5.fc39.ppc64le
libsemanage-3.5-4.fc39.ppc64le
libsepol-3.5-2.fc39.ppc64le
libsigsegv-2.14-5.fc39.ppc64le
libsmartcols-2.39.2-1.fc40.ppc64le
libssh-0.10.5-2.fc39.ppc64le
libssh-config-0.10.5-2.fc39.noarch
libstdc++-13.2.1-1.fc39.ppc64le
libtasn1-4.19.0-3.fc39.ppc64le
libtirpc-1.3.3-1.rc2.fc39.ppc64le
libunistring-1.1-5.fc40.ppc64le
libutempter-1.2.1-10.fc39.ppc64le
libuuid-2.39.2-1.fc40.ppc64le
libverto-0.3.2-6.fc39.ppc64le
libxcrypt-4.4.36-2.fc39.ppc64le
libxml2-2.11.5-1.fc40.ppc64le
libzstd-1.5.5-4.fc40.ppc64le
lua-libs-5.4.6-3.fc39.ppc64le
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.ppc64le
mpfr-4.2.0-3.fc39.ppc64le
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.ppc64le
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.ppc64le
openssl-libs-3.1.1-4.fc40.ppc64le
p11-kit-0.25.0-2.fc39.ppc64le
p11-kit-trust-0.25.0-2.fc39.ppc64le
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.ppc64le
pam-libs-1.5.3-2.fc39.ppc64le
patch-2.7.6-22.fc39.ppc64le
pcre2-10.42-1.fc39.2.ppc64le
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.ppc64le
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.ppc64le
popt-1.19-3.fc39.ppc64le
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.ppc64le
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.ppc64le
rpm-build-4.18.99-1.fc40.ppc64le
rpm-build-libs-4.18.99-1.fc40.ppc64le
rpm-libs-4.18.99-1.fc40.ppc64le
rpm-sequoia-1.5.0-1.fc40.ppc64le
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.ppc64le
setup-2.14.4-1.fc39.noarch
shadow-utils-4.14.0-1.fc40.ppc64le
sqlite-libs-3.43.1-1.fc40.ppc64le
systemd-libs-254.1-2.fc40.ppc64le
tar-1.35-2.fc40.ppc64le
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.ppc64le
util-linux-2.39.2-1.fc40.ppc64le
util-linux-core-2.39.2-1.fc40.ppc64le
which-2.21-40.fc39.ppc64le
xxhash-libs-0.8.2-1.fc39.ppc64le
xz-5.4.4-1.fc39.ppc64le
xz-libs-5.4.4-1.fc39.ppc64le
zip-3.0-38.fc39.ppc64le
zlib-ng-compat-2.1.3-3.fc40.ppc64le
zstd-1.5.5-4.fc40.ppc64le
Start: buildsrpm
Start: rpmbuild -bs
warning: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N)
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689811200
Wrote: /builddir/build/SRPMS/mmseq-1.0.11-16.fc40.src.rpm
RPM build warnings:
%patchN is deprecated (1 usages found), use %patch N (or %patch -P N)
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-2suzkddz/mmseq/mmseq.spec) Config(child) 4 minutes 42 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/mmseq-1.0.11-16.fc40.src.rpm) Config(fedora-rawhide-ppc64le)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695067711.503818/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695067711.503818/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Finish: chroot init
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.18.99-1.fc40.ppc64le
rpm-sequoia-1.5.0-1.fc40.ppc64le
python3-dnf-4.16.2-4.fc40.noarch
python3-dnf-plugins-core-4.4.2-1.fc39.noarch
yum-4.16.2-4.fc40.noarch
Start: build phase for mmseq-1.0.11-16.fc40.src.rpm
Start: build setup for mmseq-1.0.11-16.fc40.src.rpm
warning: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N)
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689811200
Wrote: /builddir/build/SRPMS/mmseq-1.0.11-16.fc40.src.rpm
RPM build warnings:
%patchN is deprecated (1 usages found), use %patch N (or %patch -P N)
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 12 kB/s | 1.5 kB 00:00
Copr repository 4.8 MB/s | 5.2 MB 00:01
fedora 92 kB/s | 6.1 kB 00:00
Last metadata expiration check: 0:00:01 ago on Mon Sep 18 20:13:45 2023.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing:
armadillo-devel ppc64le 10.8.2-5.fc39 fedora 2.2 M
boost-devel ppc64le 1.81.0-6.fc40 copr_base 12 M
flexiblas-devel ppc64le 3.3.1-5.fc39 fedora 117 k
gcc-c++ ppc64le 13.2.1-1.fc39 fedora 12 M
gsl-devel ppc64le 2.7.1-5.fc39 fedora 653 k
htslib-devel ppc64le 1.15.1-3.fc40 copr_base 100 k
make ppc64le 1:4.4.1-2.fc39 fedora 604 k
perl-generators noarch 1.16-3.fc39 fedora 16 k
zlib-ng-compat-devel ppc64le 2.1.3-3.fc40 copr_base 34 k
Installing dependencies:
SuperLU ppc64le 6.0.0-1.fc39 fedora 205 k
SuperLU-devel ppc64le 6.0.0-1.fc39 fedora 27 k
annobin-docs noarch 12.26-1.fc40 fedora 94 k
annobin-plugin-gcc ppc64le 12.26-1.fc40 fedora 961 k
armadillo ppc64le 10.8.2-5.fc39 fedora 39 k
arpack ppc64le 3.8.0-7.fc39 fedora 185 k
arpack-devel ppc64le 3.8.0-7.fc39 fedora 14 k
autoconf noarch 2.71-7.fc40 fedora 733 k
automake noarch 1.16.5-14.fc40 fedora 697 k
boost ppc64le 1.81.0-6.fc40 copr_base 15 k
boost-atomic ppc64le 1.81.0-6.fc40 copr_base 20 k
boost-chrono ppc64le 1.81.0-6.fc40 copr_base 27 k
boost-container ppc64le 1.81.0-6.fc40 copr_base 43 k
boost-context ppc64le 1.81.0-6.fc40 copr_base 18 k
boost-contract ppc64le 1.81.0-6.fc40 copr_base 47 k
boost-coroutine ppc64le 1.81.0-6.fc40 copr_base 22 k
boost-date-time ppc64le 1.81.0-6.fc40 copr_base 17 k
boost-fiber ppc64le 1.81.0-6.fc40 copr_base 45 k
boost-filesystem ppc64le 1.81.0-6.fc40 copr_base 70 k
boost-graph ppc64le 1.81.0-6.fc40 copr_base 159 k
boost-iostreams ppc64le 1.81.0-6.fc40 copr_base 42 k
boost-json ppc64le 1.81.0-6.fc40 copr_base 116 k
boost-locale ppc64le 1.81.0-6.fc40 copr_base 245 k
boost-log ppc64le 1.81.0-6.fc40 copr_base 522 k
boost-math ppc64le 1.81.0-6.fc40 copr_base 308 k
boost-nowide ppc64le 1.81.0-6.fc40 copr_base 22 k
boost-numpy3 ppc64le 1.81.0-6.fc40 copr_base 31 k
boost-program-options ppc64le 1.81.0-6.fc40 copr_base 117 k
boost-python3 ppc64le 1.81.0-6.fc40 copr_base 118 k
boost-random ppc64le 1.81.0-6.fc40 copr_base 26 k
boost-regex ppc64le 1.81.0-6.fc40 copr_base 123 k
boost-serialization ppc64le 1.81.0-6.fc40 copr_base 139 k
boost-stacktrace ppc64le 1.81.0-6.fc40 copr_base 32 k
boost-system ppc64le 1.81.0-6.fc40 copr_base 17 k
boost-test ppc64le 1.81.0-6.fc40 copr_base 251 k
boost-thread ppc64le 1.81.0-6.fc40 copr_base 61 k
boost-timer ppc64le 1.81.0-6.fc40 copr_base 44 k
boost-type_erasure ppc64le 1.81.0-6.fc40 copr_base 34 k
boost-wave ppc64le 1.81.0-6.fc40 copr_base 239 k
cmake-filesystem ppc64le 3.27.4-8.fc40 fedora 19 k
cpp ppc64le 13.2.1-1.fc39 fedora 9.8 M
emacs-filesystem noarch 1:29.1-1.fc39 fedora 8.4 k
expat ppc64le 2.5.0-3.fc39 fedora 116 k
flexiblas ppc64le 3.3.1-5.fc39 fedora 33 k
flexiblas-netlib ppc64le 3.3.1-5.fc39 fedora 2.8 M
flexiblas-netlib64 ppc64le 3.3.1-5.fc39 fedora 2.7 M
flexiblas-openblas-openmp ppc64le 3.3.1-5.fc39 fedora 17 k
flexiblas-openblas-openmp64 ppc64le 3.3.1-5.fc39 fedora 17 k
gc ppc64le 8.2.2-4.fc39 fedora 122 k
gcc ppc64le 13.2.1-1.fc39 fedora 31 M
gcc-gfortran ppc64le 13.2.1-1.fc39 fedora 11 M
gcc-plugin-annobin ppc64le 13.2.1-1.fc39 fedora 49 k
glibc-devel ppc64le 2.38.9000-8.fc40 copr_base 515 k
groff-base ppc64le 1.23.0-2.fc39 fedora 1.2 M
gsl ppc64le 2.7.1-5.fc39 fedora 1.2 M
guile22 ppc64le 2.2.7-9.fc39 fedora 6.6 M
hdf5 ppc64le 1.12.1-12.fc39 fedora 2.3 M
hdf5-devel ppc64le 1.12.1-12.fc39 fedora 1.3 M
htslib ppc64le 1.15.1-3.fc40 copr_base 560 k
kernel-headers ppc64le 6.6.0-0.rc1.git0.1.fc40 fedora 1.5 M
libaec ppc64le 1.0.6-5.fc39 fedora 45 k
libaec-devel ppc64le 1.0.6-5.fc39 fedora 12 k
libasan ppc64le 13.2.1-1.fc39 fedora 493 k
libatomic ppc64le 13.2.1-1.fc39 fedora 35 k
libb2 ppc64le 0.98.1-9.fc39 fedora 25 k
libgfortran ppc64le 13.2.1-1.fc39 fedora 608 k
libicu ppc64le 73.2-2.fc39 fedora 11 M
libicu-devel ppc64le 73.2-2.fc39 fedora 925 k
libmpc ppc64le 1.3.1-3.fc39 fedora 95 k
libquadmath ppc64le 13.2.1-1.fc39 fedora 210 k
libquadmath-devel ppc64le 13.2.1-1.fc39 fedora 36 k
libstdc++-devel ppc64le 13.2.1-1.fc39 fedora 2.6 M
libtool-ltdl ppc64le 2.4.7-8.fc40 fedora 40 k
libubsan ppc64le 13.2.1-1.fc39 fedora 250 k
libxcrypt-devel ppc64le 4.4.36-2.fc39 fedora 30 k
m4 ppc64le 1.4.19-7.fc40 fedora 319 k
metis ppc64le 5.1.0.3-2.fc39 fedora 599 k
mpdecimal ppc64le 2.5.1-7.fc39 fedora 104 k
ncurses ppc64le 6.4-7.20230520.fc40 fedora 424 k
openblas ppc64le 0.3.21-6.fc39 fedora 35 k
openblas-openmp ppc64le 0.3.21-6.fc39 fedora 4.5 M
openblas-openmp64 ppc64le 0.3.21-6.fc39 fedora 4.4 M
perl-AutoLoader noarch 5.74-500.fc39 fedora 21 k
perl-B ppc64le 1.88-500.fc39 fedora 181 k
perl-Carp noarch 1.54-500.fc39 fedora 29 k
perl-Class-Struct noarch 0.68-500.fc39 fedora 22 k
perl-Data-Dumper ppc64le 2.188-501.fc39 fedora 57 k
perl-Digest noarch 1.20-500.fc39 fedora 25 k
perl-Digest-MD5 ppc64le 2.58-500.fc39 fedora 36 k
perl-DynaLoader ppc64le 1.54-500.fc39 fedora 26 k
perl-Encode ppc64le 4:3.19-500.fc39 fedora 1.7 M
perl-Errno ppc64le 1.37-500.fc39 fedora 15 k
perl-Exporter noarch 5.77-500.fc39 fedora 31 k
perl-Fcntl ppc64le 1.15-500.fc39 fedora 21 k
perl-Fedora-VSP noarch 0.001-32.fc39 fedora 23 k
perl-File-Basename noarch 2.86-500.fc39 fedora 17 k
perl-File-Compare noarch 1.100.700-500.fc39 fedora 13 k
perl-File-Copy noarch 2.41-500.fc39 fedora 20 k
perl-File-Find noarch 1.43-500.fc39 fedora 25 k
perl-File-Path noarch 2.18-500.fc39 fedora 35 k
perl-File-Temp noarch 1:0.231.100-500.fc39 fedora 58 k
perl-File-stat noarch 1.13-500.fc39 fedora 17 k
perl-FileHandle noarch 2.05-500.fc39 fedora 16 k
perl-Getopt-Long noarch 1:2.54-500.fc39 fedora 60 k
perl-Getopt-Std noarch 1.13-500.fc39 fedora 16 k
perl-HTTP-Tiny noarch 0.088-3.fc39 fedora 56 k
perl-IO ppc64le 1.52-500.fc39 fedora 83 k
perl-IO-Socket-IP noarch 0.42-1.fc39 fedora 42 k
perl-IO-Socket-SSL noarch 2.083-3.fc39 fedora 225 k
perl-IPC-Open3 noarch 1.22-500.fc39 fedora 22 k
perl-MIME-Base64 ppc64le 3.16-500.fc39 fedora 30 k
perl-Mozilla-CA noarch 20230821-1.fc40 fedora 13 k
perl-Net-SSLeay ppc64le 1.92-10.fc39 fedora 367 k
perl-POSIX ppc64le 2.13-500.fc39 fedora 117 k
perl-PathTools ppc64le 3.89-500.fc39 fedora 88 k
perl-Pod-Escapes noarch 1:1.07-501.fc40 fedora 19 k
perl-Pod-Perldoc noarch 3.28.01-501.fc39 fedora 86 k
perl-Pod-Simple noarch 1:3.45-4.fc39 fedora 218 k
perl-Pod-Usage noarch 4:2.03-500.fc39 fedora 39 k
perl-Scalar-List-Utils ppc64le 5:1.63-500.fc39 fedora 75 k
perl-SelectSaver noarch 1.02-500.fc39 fedora 12 k
perl-Socket ppc64le 4:2.037-3.fc39 fedora 56 k
perl-Storable ppc64le 1:3.32-500.fc39 fedora 103 k
perl-Symbol noarch 1.09-500.fc39 fedora 14 k
perl-Term-ANSIColor noarch 5.01-501.fc39 fedora 47 k
perl-Term-Cap noarch 1.18-500.fc39 fedora 22 k
perl-Text-ParseWords noarch 3.31-500.fc39 fedora 16 k
perl-Text-Tabs+Wrap noarch 2023.0511-3.fc39 fedora 22 k
perl-Thread-Queue noarch 3.14-501.fc40 fedora 21 k
perl-Time-Local noarch 2:1.350-3.fc39 fedora 34 k
perl-URI noarch 5.21-1.fc40 fedora 125 k
perl-base noarch 2.27-500.fc39 fedora 16 k
perl-constant noarch 1.33-501.fc39 fedora 22 k
perl-if noarch 0.61.000-500.fc39 fedora 14 k
perl-interpreter ppc64le 4:5.38.0-500.fc39 fedora 72 k
perl-libnet noarch 3.15-501.fc39 fedora 129 k
perl-libs ppc64le 4:5.38.0-500.fc39 fedora 2.4 M
perl-locale noarch 1.10-500.fc39 fedora 14 k
perl-macros noarch 4:5.38.0-500.fc39 fedora 12 k
perl-mro ppc64le 1.28-500.fc39 fedora 29 k
perl-overload noarch 1.37-500.fc39 fedora 46 k
perl-overloading noarch 0.02-500.fc39 fedora 13 k
perl-parent noarch 1:0.241-500.fc39 fedora 14 k
perl-podlators noarch 1:5.01-500.fc39 fedora 125 k
perl-threads ppc64le 1:2.36-500.fc39 fedora 58 k
perl-threads-shared ppc64le 1.68-500.fc39 fedora 46 k
perl-vars noarch 1.05-500.fc39 fedora 13 k
python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M
python3 ppc64le 3.12.0~rc2-1.fc40 fedora 26 k
python3-libs ppc64le 3.12.0~rc2-1.fc40 fedora 9.3 M
python3-numpy ppc64le 1:1.24.4-2.fc39 fedora 7.6 M
Transaction Summary
================================================================================
Install 160 Packages
Total download size: 158 M
Installed size: 718 M
Downloading Packages:
(1/160): boost-1.81.0-6.fc40.ppc64le.rpm 243 kB/s | 15 kB 00:00
(2/160): boost-chrono-1.81.0-6.fc40.ppc64le.rpm 403 kB/s | 27 kB 00:00
(3/160): boost-atomic-1.81.0-6.fc40.ppc64le.rpm 298 kB/s | 20 kB 00:00
(4/160): boost-container-1.81.0-6.fc40.ppc64le. 5.9 MB/s | 43 kB 00:00
(5/160): boost-context-1.81.0-6.fc40.ppc64le.rp 2.9 MB/s | 18 kB 00:00
(6/160): boost-coroutine-1.81.0-6.fc40.ppc64le. 3.4 MB/s | 22 kB 00:00
(7/160): boost-contract-1.81.0-6.fc40.ppc64le.r 4.6 MB/s | 47 kB 00:00
(8/160): boost-date-time-1.81.0-6.fc40.ppc64le. 2.7 MB/s | 17 kB 00:00
(9/160): boost-fiber-1.81.0-6.fc40.ppc64le.rpm 2.8 MB/s | 45 kB 00:00
(10/160): boost-filesystem-1.81.0-6.fc40.ppc64l 4.2 MB/s | 70 kB 00:00
(11/160): boost-graph-1.81.0-6.fc40.ppc64le.rpm 16 MB/s | 159 kB 00:00
(12/160): boost-iostreams-1.81.0-6.fc40.ppc64le 4.2 MB/s | 42 kB 00:00
(13/160): boost-json-1.81.0-6.fc40.ppc64le.rpm 9.0 MB/s | 116 kB 00:00
(14/160): boost-locale-1.81.0-6.fc40.ppc64le.rp 17 MB/s | 245 kB 00:00
(15/160): boost-log-1.81.0-6.fc40.ppc64le.rpm 33 MB/s | 522 kB 00:00
(16/160): boost-math-1.81.0-6.fc40.ppc64le.rpm 17 MB/s | 308 kB 00:00
(17/160): boost-devel-1.81.0-6.fc40.ppc64le.rpm 63 MB/s | 12 MB 00:00
(18/160): boost-nowide-1.81.0-6.fc40.ppc64le.rp 275 kB/s | 22 kB 00:00
(19/160): boost-numpy3-1.81.0-6.fc40.ppc64le.rp 376 kB/s | 31 kB 00:00
(20/160): boost-program-options-1.81.0-6.fc40.p 14 MB/s | 117 kB 00:00
(21/160): boost-python3-1.81.0-6.fc40.ppc64le.r 13 MB/s | 118 kB 00:00
(22/160): boost-random-1.81.0-6.fc40.ppc64le.rp 2.7 MB/s | 26 kB 00:00
(23/160): boost-regex-1.81.0-6.fc40.ppc64le.rpm 14 MB/s | 123 kB 00:00
(24/160): boost-serialization-1.81.0-6.fc40.ppc 15 MB/s | 139 kB 00:00
(25/160): boost-stacktrace-1.81.0-6.fc40.ppc64l 3.2 MB/s | 32 kB 00:00
(26/160): boost-system-1.81.0-6.fc40.ppc64le.rp 3.1 MB/s | 17 kB 00:00
(27/160): boost-thread-1.81.0-6.fc40.ppc64le.rp 8.5 MB/s | 61 kB 00:00
(28/160): boost-test-1.81.0-6.fc40.ppc64le.rpm 24 MB/s | 251 kB 00:00
(29/160): boost-timer-1.81.0-6.fc40.ppc64le.rpm 5.5 MB/s | 44 kB 00:00
(30/160): boost-type_erasure-1.81.0-6.fc40.ppc6 5.5 MB/s | 34 kB 00:00
(31/160): boost-wave-1.81.0-6.fc40.ppc64le.rpm 22 MB/s | 239 kB 00:00
(32/160): glibc-devel-2.38.9000-8.fc40.ppc64le. 38 MB/s | 515 kB 00:00
(33/160): zlib-ng-compat-devel-2.1.3-3.fc40.ppc 6.4 MB/s | 34 kB 00:00
(34/160): htslib-devel-1.15.1-3.fc40.ppc64le.rp 223 kB/s | 100 kB 00:00
(35/160): htslib-1.15.1-3.fc40.ppc64le.rpm 918 kB/s | 560 kB 00:00
(36/160): SuperLU-6.0.0-1.fc39.ppc64le.rpm 333 kB/s | 205 kB 00:00
(37/160): SuperLU-devel-6.0.0-1.fc39.ppc64le.rp 146 kB/s | 27 kB 00:00
(38/160): armadillo-10.8.2-5.fc39.ppc64le.rpm 207 kB/s | 39 kB 00:00
(39/160): annobin-docs-12.26-1.fc40.noarch.rpm 180 kB/s | 94 kB 00:00
(40/160): annobin-plugin-gcc-12.26-1.fc40.ppc64 1.2 MB/s | 961 kB 00:00
(41/160): arpack-3.8.0-7.fc39.ppc64le.rpm 537 kB/s | 185 kB 00:00
(42/160): armadillo-devel-10.8.2-5.fc39.ppc64le 3.0 MB/s | 2.2 MB 00:00
(43/160): arpack-devel-3.8.0-7.fc39.ppc64le.rpm 38 kB/s | 14 kB 00:00
(44/160): autoconf-2.71-7.fc40.noarch.rpm 2.0 MB/s | 733 kB 00:00
(45/160): cmake-filesystem-3.27.4-8.fc40.ppc64l 182 kB/s | 19 kB 00:00
(46/160): emacs-filesystem-29.1-1.fc39.noarch.r 81 kB/s | 8.4 kB 00:00
(47/160): automake-1.16.5-14.fc40.noarch.rpm 987 kB/s | 697 kB 00:00
(48/160): expat-2.5.0-3.fc39.ppc64le.rpm 339 kB/s | 116 kB 00:00
(49/160): flexiblas-3.3.1-5.fc39.ppc64le.rpm 317 kB/s | 33 kB 00:00
(50/160): flexiblas-devel-3.3.1-5.fc39.ppc64le. 317 kB/s | 117 kB 00:00
(51/160): flexiblas-netlib-3.3.1-5.fc39.ppc64le 6.1 MB/s | 2.8 MB 00:00
(52/160): cpp-13.2.1-1.fc39.ppc64le.rpm 8.8 MB/s | 9.8 MB 00:01
(53/160): flexiblas-openblas-openmp-3.3.1-5.fc3 122 kB/s | 17 kB 00:00
(54/160): flexiblas-openblas-openmp64-3.3.1-5.f 166 kB/s | 17 kB 00:00
(55/160): gc-8.2.2-4.fc39.ppc64le.rpm 214 kB/s | 122 kB 00:00
(56/160): flexiblas-netlib64-3.3.1-5.fc39.ppc64 2.9 MB/s | 2.7 MB 00:00
(57/160): gcc-gfortran-13.2.1-1.fc39.ppc64le.rp 13 MB/s | 11 MB 00:00
(58/160): gcc-13.2.1-1.fc39.ppc64le.rpm 16 MB/s | 31 MB 00:01
(59/160): gcc-c++-13.2.1-1.fc39.ppc64le.rpm 7.8 MB/s | 12 MB 00:01
(60/160): gcc-plugin-annobin-13.2.1-1.fc39.ppc6 89 kB/s | 49 kB 00:00
(61/160): groff-base-1.23.0-2.fc39.ppc64le.rpm 2.2 MB/s | 1.2 MB 00:00
(62/160): gsl-devel-2.7.1-5.fc39.ppc64le.rpm 1.2 MB/s | 653 kB 00:00
(63/160): gsl-2.7.1-5.fc39.ppc64le.rpm 1.9 MB/s | 1.2 MB 00:00
(64/160): hdf5-1.12.1-12.fc39.ppc64le.rpm 10 MB/s | 2.3 MB 00:00
(65/160): hdf5-devel-1.12.1-12.fc39.ppc64le.rpm 2.5 MB/s | 1.3 MB 00:00
(66/160): libaec-1.0.6-5.fc39.ppc64le.rpm 447 kB/s | 45 kB 00:00
(67/160): guile22-2.2.7-9.fc39.ppc64le.rpm 7.5 MB/s | 6.6 MB 00:00
(68/160): kernel-headers-6.6.0-0.rc1.git0.1.fc4 2.3 MB/s | 1.5 MB 00:00
(69/160): libaec-devel-1.0.6-5.fc39.ppc64le.rpm 79 kB/s | 12 kB 00:00
(70/160): libb2-0.98.1-9.fc39.ppc64le.rpm 248 kB/s | 25 kB 00:00
(71/160): libatomic-13.2.1-1.fc39.ppc64le.rpm 164 kB/s | 35 kB 00:00
(72/160): libasan-13.2.1-1.fc39.ppc64le.rpm 1.3 MB/s | 493 kB 00:00
(73/160): libicu-73.2-2.fc39.ppc64le.rpm 18 MB/s | 11 MB 00:00
(74/160): libgfortran-13.2.1-1.fc39.ppc64le.rpm 768 kB/s | 608 kB 00:00
(75/160): libicu-devel-73.2-2.fc39.ppc64le.rpm 1.5 MB/s | 925 kB 00:00
(76/160): libquadmath-13.2.1-1.fc39.ppc64le.rpm 1.0 MB/s | 210 kB 00:00
(77/160): libquadmath-devel-13.2.1-1.fc39.ppc64 198 kB/s | 36 kB 00:00
(78/160): libmpc-1.3.1-3.fc39.ppc64le.rpm 271 kB/s | 95 kB 00:00
(79/160): libubsan-13.2.1-1.fc39.ppc64le.rpm 1.3 MB/s | 250 kB 00:00
(80/160): libtool-ltdl-2.4.7-8.fc40.ppc64le.rpm 153 kB/s | 40 kB 00:00
(81/160): libxcrypt-devel-4.4.36-2.fc39.ppc64le 148 kB/s | 30 kB 00:00
(82/160): libstdc++-devel-13.2.1-1.fc39.ppc64le 3.6 MB/s | 2.6 MB 00:00
(83/160): make-4.4.1-2.fc39.ppc64le.rpm 2.0 MB/s | 604 kB 00:00
(84/160): m4-1.4.19-7.fc40.ppc64le.rpm 718 kB/s | 319 kB 00:00
(85/160): metis-5.1.0.3-2.fc39.ppc64le.rpm 5.2 MB/s | 599 kB 00:00
(86/160): mpdecimal-2.5.1-7.fc39.ppc64le.rpm 560 kB/s | 104 kB 00:00
(87/160): openblas-0.3.21-6.fc39.ppc64le.rpm 351 kB/s | 35 kB 00:00
(88/160): ncurses-6.4-7.20230520.fc40.ppc64le.r 801 kB/s | 424 kB 00:00
(89/160): openblas-openmp64-0.3.21-6.fc39.ppc64 9.7 MB/s | 4.4 MB 00:00
(90/160): perl-AutoLoader-5.74-500.fc39.noarch. 170 kB/s | 21 kB 00:00
(91/160): perl-Carp-1.54-500.fc39.noarch.rpm 276 kB/s | 29 kB 00:00
(92/160): perl-B-1.88-500.fc39.ppc64le.rpm 514 kB/s | 181 kB 00:00
(93/160): perl-Class-Struct-0.68-500.fc39.noarc 82 kB/s | 22 kB 00:00
(94/160): perl-Digest-1.20-500.fc39.noarch.rpm 211 kB/s | 25 kB 00:00
(95/160): openblas-openmp-0.3.21-6.fc39.ppc64le 4.2 MB/s | 4.5 MB 00:01
(96/160): perl-Data-Dumper-2.188-501.fc39.ppc64 210 kB/s | 57 kB 00:00
(97/160): perl-Digest-MD5-2.58-500.fc39.ppc64le 198 kB/s | 36 kB 00:00
(98/160): perl-DynaLoader-1.54-500.fc39.ppc64le 225 kB/s | 26 kB 00:00
(99/160): perl-Encode-3.19-500.fc39.ppc64le.rpm 11 MB/s | 1.7 MB 00:00
(100/160): perl-Errno-1.37-500.fc39.ppc64le.rpm 132 kB/s | 15 kB 00:00
(101/160): perl-Exporter-5.77-500.fc39.noarch.r 169 kB/s | 31 kB 00:00
(102/160): perl-Fcntl-1.15-500.fc39.ppc64le.rpm 205 kB/s | 21 kB 00:00
(103/160): perl-Fedora-VSP-0.001-32.fc39.noarch 226 kB/s | 23 kB 00:00
(104/160): perl-File-Compare-1.100.700-500.fc39 131 kB/s | 13 kB 00:00
(105/160): perl-File-Copy-2.41-500.fc39.noarch. 196 kB/s | 20 kB 00:00
(106/160): perl-File-Basename-2.86-500.fc39.noa 81 kB/s | 17 kB 00:00
(107/160): perl-File-Find-1.43-500.fc39.noarch. 247 kB/s | 25 kB 00:00
(108/160): perl-File-Path-2.18-500.fc39.noarch. 339 kB/s | 35 kB 00:00
(109/160): perl-File-Temp-0.231.100-500.fc39.no 562 kB/s | 58 kB 00:00
(110/160): perl-FileHandle-2.05-500.fc39.noarch 154 kB/s | 16 kB 00:00
(111/160): perl-Getopt-Long-2.54-500.fc39.noarc 596 kB/s | 60 kB 00:00
(112/160): perl-Getopt-Std-1.13-500.fc39.noarch 137 kB/s | 16 kB 00:00
(113/160): perl-IO-1.52-500.fc39.ppc64le.rpm 453 kB/s | 83 kB 00:00
(114/160): perl-HTTP-Tiny-0.088-3.fc39.noarch.r 194 kB/s | 56 kB 00:00
(115/160): perl-IO-Socket-IP-0.42-1.fc39.noarch 409 kB/s | 42 kB 00:00
(116/160): perl-IO-Socket-SSL-2.083-3.fc39.noar 2.0 MB/s | 225 kB 00:00
(117/160): perl-IPC-Open3-1.22-500.fc39.noarch. 225 kB/s | 22 kB 00:00
(118/160): perl-File-stat-1.13-500.fc39.noarch. 26 kB/s | 17 kB 00:00
(119/160): perl-Mozilla-CA-20230821-1.fc40.noar 126 kB/s | 13 kB 00:00
(120/160): perl-MIME-Base64-3.16-500.fc39.ppc64 168 kB/s | 30 kB 00:00
(121/160): perl-Net-SSLeay-1.92-10.fc39.ppc64le 1.4 MB/s | 367 kB 00:00
(122/160): perl-PathTools-3.89-500.fc39.ppc64le 483 kB/s | 88 kB 00:00
(123/160): perl-Pod-Escapes-1.07-501.fc40.noarc 193 kB/s | 19 kB 00:00
(124/160): perl-POSIX-2.13-500.fc39.ppc64le.rpm 324 kB/s | 117 kB 00:00
(125/160): perl-Pod-Usage-2.03-500.fc39.noarch. 362 kB/s | 39 kB 00:00
(126/160): perl-Pod-Perldoc-3.28.01-501.fc39.no 319 kB/s | 86 kB 00:00
(127/160): perl-SelectSaver-1.02-500.fc39.noarc 64 kB/s | 12 kB 00:00
(128/160): perl-Scalar-List-Utils-1.63-500.fc39 285 kB/s | 75 kB 00:00
(129/160): perl-Pod-Simple-3.45-4.fc39.noarch.r 506 kB/s | 218 kB 00:00
(130/160): perl-Socket-2.037-3.fc39.ppc64le.rpm 551 kB/s | 56 kB 00:00
(131/160): perl-Symbol-1.09-500.fc39.noarch.rpm 144 kB/s | 14 kB 00:00
(132/160): perl-Storable-3.32-500.fc39.ppc64le. 375 kB/s | 103 kB 00:00
(133/160): perl-Term-ANSIColor-5.01-501.fc39.no 173 kB/s | 47 kB 00:00
(134/160): perl-Term-Cap-1.18-500.fc39.noarch.r 82 kB/s | 22 kB 00:00
(135/160): perl-Text-Tabs+Wrap-2023.0511-3.fc39 230 kB/s | 22 kB 00:00
(136/160): perl-Text-ParseWords-3.31-500.fc39.n 89 kB/s | 16 kB 00:00
(137/160): perl-Time-Local-1.350-3.fc39.noarch. 333 kB/s | 34 kB 00:00
(138/160): perl-Thread-Queue-3.14-501.fc40.noar 113 kB/s | 21 kB 00:00
(139/160): perl-constant-1.33-501.fc39.noarch.r 221 kB/s | 22 kB 00:00
(140/160): perl-base-2.27-500.fc39.noarch.rpm 90 kB/s | 16 kB 00:00
(141/160): perl-URI-5.21-1.fc40.noarch.rpm 359 kB/s | 125 kB 00:00
(142/160): perl-if-0.61.000-500.fc39.noarch.rpm 76 kB/s | 14 kB 00:00
(143/160): perl-generators-1.16-3.fc39.noarch.r 60 kB/s | 16 kB 00:00
(144/160): perl-interpreter-5.38.0-500.fc39.ppc 269 kB/s | 72 kB 00:00
(145/160): perl-locale-1.10-500.fc39.noarch.rpm 137 kB/s | 14 kB 00:00
(146/160): perl-libnet-3.15-501.fc39.noarch.rpm 375 kB/s | 129 kB 00:00
(147/160): perl-macros-5.38.0-500.fc39.noarch.r 68 kB/s | 12 kB 00:00
(148/160): perl-mro-1.28-500.fc39.ppc64le.rpm 160 kB/s | 29 kB 00:00
(149/160): perl-overloading-0.02-500.fc39.noarc 128 kB/s | 13 kB 00:00
(150/160): perl-overload-1.37-500.fc39.noarch.r 169 kB/s | 46 kB 00:00
(151/160): perl-parent-0.241-500.fc39.noarch.rp 147 kB/s | 14 kB 00:00
(152/160): perl-libs-5.38.0-500.fc39.ppc64le.rp 3.4 MB/s | 2.4 MB 00:00
(153/160): perl-threads-2.36-500.fc39.ppc64le.r 209 kB/s | 58 kB 00:00
(154/160): perl-threads-shared-1.68-500.fc39.pp 173 kB/s | 46 kB 00:00
(155/160): perl-podlators-5.01-500.fc39.noarch. 354 kB/s | 125 kB 00:00
(156/160): perl-vars-1.05-500.fc39.noarch.rpm 136 kB/s | 13 kB 00:00
(157/160): python3-3.12.0~rc2-1.fc40.ppc64le.rp 74 kB/s | 26 kB 00:00
(158/160): python-pip-wheel-23.2.1-1.fc39.noarc 2.3 MB/s | 1.5 MB 00:00
(159/160): python3-libs-3.12.0~rc2-1.fc40.ppc64 10 MB/s | 9.3 MB 00:00
(160/160): python3-numpy-1.24.4-2.fc39.ppc64le. 1.9 MB/s | 7.6 MB 00:04
--------------------------------------------------------------------------------
Total 8.6 MB/s | 158 MB 00:18
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Preparing : 1/1
Installing : boost-system-1.81.0-6.fc40.ppc64le 1/160
Installing : libgfortran-13.2.1-1.fc39.ppc64le 2/160
Installing : boost-chrono-1.81.0-6.fc40.ppc64le 3/160
Installing : boost-thread-1.81.0-6.fc40.ppc64le 4/160
Installing : libicu-73.2-2.fc39.ppc64le 5/160
Installing : libquadmath-13.2.1-1.fc39.ppc64le 6/160
Installing : libmpc-1.3.1-3.fc39.ppc64le 7/160
Installing : boost-regex-1.81.0-6.fc40.ppc64le 8/160
Installing : boost-context-1.81.0-6.fc40.ppc64le 9/160
Installing : boost-atomic-1.81.0-6.fc40.ppc64le 10/160
Installing : boost-filesystem-1.81.0-6.fc40.ppc64le 11/160
Installing : openblas-0.3.21-6.fc39.ppc64le 12/160
Installing : libstdc++-devel-13.2.1-1.fc39.ppc64le 13/160
Installing : libaec-1.0.6-5.fc39.ppc64le 14/160
Installing : hdf5-1.12.1-12.fc39.ppc64le 15/160
Installing : boost-date-time-1.81.0-6.fc40.ppc64le 16/160
Installing : boost-container-1.81.0-6.fc40.ppc64le 17/160
Installing : boost-json-1.81.0-6.fc40.ppc64le 18/160
Installing : boost-wave-1.81.0-6.fc40.ppc64le 19/160
Installing : libaec-devel-1.0.6-5.fc39.ppc64le 20/160
Installing : openblas-openmp-0.3.21-6.fc39.ppc64le 21/160
Installing : openblas-openmp64-0.3.21-6.fc39.ppc64le 22/160
Installing : flexiblas-netlib-3.3.1-5.fc39.ppc64le 23/160
Installing : flexiblas-openblas-openmp-3.3.1-5.fc39.ppc64le 24/160
Installing : flexiblas-netlib64-3.3.1-5.fc39.ppc64le 25/160
Installing : flexiblas-openblas-openmp64-3.3.1-5.fc39.ppc64le 26/160
Installing : flexiblas-3.3.1-5.fc39.ppc64le 27/160
Installing : arpack-3.8.0-7.fc39.ppc64le 28/160
Installing : arpack-devel-3.8.0-7.fc39.ppc64le 29/160
Installing : flexiblas-devel-3.3.1-5.fc39.ppc64le 30/160
Installing : boost-fiber-1.81.0-6.fc40.ppc64le 31/160
Installing : boost-log-1.81.0-6.fc40.ppc64le 32/160
Installing : boost-coroutine-1.81.0-6.fc40.ppc64le 33/160
Installing : boost-graph-1.81.0-6.fc40.ppc64le 34/160
Installing : cpp-13.2.1-1.fc39.ppc64le 35/160
Installing : boost-locale-1.81.0-6.fc40.ppc64le 36/160
Installing : libicu-devel-73.2-2.fc39.ppc64le 37/160
Installing : boost-type_erasure-1.81.0-6.fc40.ppc64le 38/160
Installing : boost-timer-1.81.0-6.fc40.ppc64le 39/160
Installing : python-pip-wheel-23.2.1-1.fc39.noarch 40/160
Installing : ncurses-6.4-7.20230520.fc40.ppc64le 41/160
Installing : mpdecimal-2.5.1-7.fc39.ppc64le 42/160
Installing : metis-5.1.0.3-2.fc39.ppc64le 43/160
Installing : SuperLU-6.0.0-1.fc39.ppc64le 44/160
Installing : armadillo-10.8.2-5.fc39.ppc64le 45/160
Installing : m4-1.4.19-7.fc40.ppc64le 46/160
Installing : libubsan-13.2.1-1.fc39.ppc64le 47/160
Installing : libtool-ltdl-2.4.7-8.fc40.ppc64le 48/160
Installing : libb2-0.98.1-9.fc39.ppc64le 49/160
Installing : libatomic-13.2.1-1.fc39.ppc64le 50/160
Installing : libasan-13.2.1-1.fc39.ppc64le 51/160
Installing : kernel-headers-6.6.0-0.rc1.git0.1.fc40.ppc64le 52/160
Installing : libxcrypt-devel-4.4.36-2.fc39.ppc64le 53/160
Installing : glibc-devel-2.38.9000-8.fc40.ppc64le 54/160
Installing : gsl-2.7.1-5.fc39.ppc64le 55/160
Running scriptlet: groff-base-1.23.0-2.fc39.ppc64le 56/160
Installing : groff-base-1.23.0-2.fc39.ppc64le 56/160
Running scriptlet: groff-base-1.23.0-2.fc39.ppc64le 56/160
Installing : perl-Digest-1.20-500.fc39.noarch 57/160
Installing : perl-Digest-MD5-2.58-500.fc39.ppc64le 58/160
Installing : perl-B-1.88-500.fc39.ppc64le 59/160
Installing : perl-FileHandle-2.05-500.fc39.noarch 60/160
Installing : perl-Data-Dumper-2.188-501.fc39.ppc64le 61/160
Installing : perl-libnet-3.15-501.fc39.noarch 62/160
Installing : perl-AutoLoader-5.74-500.fc39.noarch 63/160
Installing : perl-base-2.27-500.fc39.noarch 64/160
Installing : perl-URI-5.21-1.fc40.noarch 65/160
Installing : perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch 66/160
Installing : perl-Mozilla-CA-20230821-1.fc40.noarch 67/160
Installing : perl-if-0.61.000-500.fc39.noarch 68/160
Installing : perl-locale-1.10-500.fc39.noarch 69/160
Installing : perl-IO-Socket-IP-0.42-1.fc39.noarch 70/160
Installing : perl-Time-Local-2:1.350-3.fc39.noarch 71/160
Installing : perl-File-Path-2.18-500.fc39.noarch 72/160
Installing : perl-IO-Socket-SSL-2.083-3.fc39.noarch 73/160
Installing : perl-Net-SSLeay-1.92-10.fc39.ppc64le 74/160
Installing : perl-Pod-Escapes-1:1.07-501.fc40.noarch 75/160
Installing : perl-Class-Struct-0.68-500.fc39.noarch 76/160
Installing : perl-Term-ANSIColor-5.01-501.fc39.noarch 77/160
Installing : perl-POSIX-2.13-500.fc39.ppc64le 78/160
Installing : perl-IPC-Open3-1.22-500.fc39.noarch 79/160
Installing : perl-File-Temp-1:0.231.100-500.fc39.noarch 80/160
Installing : perl-HTTP-Tiny-0.088-3.fc39.noarch 81/160
Installing : perl-Term-Cap-1.18-500.fc39.noarch 82/160
Installing : perl-Pod-Simple-1:3.45-4.fc39.noarch 83/160
Installing : perl-Socket-4:2.037-3.fc39.ppc64le 84/160
Installing : perl-SelectSaver-1.02-500.fc39.noarch 85/160
Installing : perl-Symbol-1.09-500.fc39.noarch 86/160
Installing : perl-File-stat-1.13-500.fc39.noarch 87/160
Installing : perl-podlators-1:5.01-500.fc39.noarch 88/160
Installing : perl-Pod-Perldoc-3.28.01-501.fc39.noarch 89/160
Installing : perl-Fcntl-1.15-500.fc39.ppc64le 90/160
Installing : perl-Text-ParseWords-3.31-500.fc39.noarch 91/160
Installing : perl-mro-1.28-500.fc39.ppc64le 92/160
Installing : perl-IO-1.52-500.fc39.ppc64le 93/160
Installing : perl-overloading-0.02-500.fc39.noarch 94/160
Installing : perl-Pod-Usage-4:2.03-500.fc39.noarch 95/160
Installing : perl-Errno-1.37-500.fc39.ppc64le 96/160
Installing : perl-File-Basename-2.86-500.fc39.noarch 97/160
Installing : perl-Getopt-Std-1.13-500.fc39.noarch 98/160
Installing : perl-MIME-Base64-3.16-500.fc39.ppc64le 99/160
Installing : perl-Scalar-List-Utils-5:1.63-500.fc39.ppc64le 100/160
Installing : perl-constant-1.33-501.fc39.noarch 101/160
Installing : perl-Storable-1:3.32-500.fc39.ppc64le 102/160
Installing : perl-overload-1.37-500.fc39.noarch 103/160
Installing : perl-parent-1:0.241-500.fc39.noarch 104/160
Installing : perl-vars-1.05-500.fc39.noarch 105/160
Installing : perl-Getopt-Long-1:2.54-500.fc39.noarch 106/160
Installing : perl-Carp-1.54-500.fc39.noarch 107/160
Installing : perl-Exporter-5.77-500.fc39.noarch 108/160
Installing : perl-PathTools-3.89-500.fc39.ppc64le 109/160
Installing : perl-DynaLoader-1.54-500.fc39.ppc64le 110/160
Installing : perl-Encode-4:3.19-500.fc39.ppc64le 111/160
Installing : perl-libs-4:5.38.0-500.fc39.ppc64le 112/160
Installing : perl-interpreter-4:5.38.0-500.fc39.ppc64le 113/160
Installing : perl-threads-1:2.36-500.fc39.ppc64le 114/160
Installing : perl-threads-shared-1.68-500.fc39.ppc64le 115/160
Installing : perl-Thread-Queue-3.14-501.fc40.noarch 116/160
Installing : perl-macros-4:5.38.0-500.fc39.noarch 117/160
Installing : perl-Fedora-VSP-0.001-32.fc39.noarch 118/160
Installing : perl-File-Compare-1.100.700-500.fc39.noarch 119/160
Installing : perl-File-Copy-2.41-500.fc39.noarch 120/160
Installing : perl-File-Find-1.43-500.fc39.noarch 121/160
Installing : gc-8.2.2-4.fc39.ppc64le 122/160
Installing : guile22-2.2.7-9.fc39.ppc64le 123/160
Installing : make-1:4.4.1-2.fc39.ppc64le 124/160
Installing : gcc-13.2.1-1.fc39.ppc64le 125/160
Running scriptlet: gcc-13.2.1-1.fc39.ppc64le 125/160
Installing : libquadmath-devel-13.2.1-1.fc39.ppc64le 126/160
Installing : gcc-gfortran-13.2.1-1.fc39.ppc64le 127/160
Installing : expat-2.5.0-3.fc39.ppc64le 128/160
Installing : python3-3.12.0~rc2-1.fc40.ppc64le 129/160
Installing : python3-libs-3.12.0~rc2-1.fc40.ppc64le 130/160
Installing : boost-python3-1.81.0-6.fc40.ppc64le 131/160
Installing : python3-numpy-1:1.24.4-2.fc39.ppc64le 132/160
Installing : boost-numpy3-1.81.0-6.fc40.ppc64le 133/160
Installing : emacs-filesystem-1:29.1-1.fc39.noarch 134/160
Installing : autoconf-2.71-7.fc40.noarch 135/160
Installing : automake-1.16.5-14.fc40.noarch 136/160
Installing : cmake-filesystem-3.27.4-8.fc40.ppc64le 137/160
Installing : SuperLU-devel-6.0.0-1.fc39.ppc64le 138/160
Installing : annobin-docs-12.26-1.fc40.noarch 139/160
Installing : zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le 140/160
Installing : hdf5-devel-1.12.1-12.fc39.ppc64le 141/160
Installing : htslib-1.15.1-3.fc40.ppc64le 142/160
Installing : boost-test-1.81.0-6.fc40.ppc64le 143/160
Installing : boost-stacktrace-1.81.0-6.fc40.ppc64le 144/160
Installing : boost-serialization-1.81.0-6.fc40.ppc64le 145/160
Installing : boost-random-1.81.0-6.fc40.ppc64le 146/160
Installing : boost-program-options-1.81.0-6.fc40.ppc64le 147/160
Installing : boost-nowide-1.81.0-6.fc40.ppc64le 148/160
Installing : boost-math-1.81.0-6.fc40.ppc64le 149/160
Installing : boost-iostreams-1.81.0-6.fc40.ppc64le 150/160
Installing : boost-contract-1.81.0-6.fc40.ppc64le 151/160
Installing : boost-1.81.0-6.fc40.ppc64le 152/160
Installing : boost-devel-1.81.0-6.fc40.ppc64le 153/160
Installing : htslib-devel-1.15.1-3.fc40.ppc64le 154/160
Installing : armadillo-devel-10.8.2-5.fc39.ppc64le 155/160
Installing : annobin-plugin-gcc-12.26-1.fc40.ppc64le 156/160
Running scriptlet: annobin-plugin-gcc-12.26-1.fc40.ppc64le 156/160
Installing : gsl-devel-2.7.1-5.fc39.ppc64le 157/160
Installing : gcc-c++-13.2.1-1.fc39.ppc64le 158/160
Installing : gcc-plugin-annobin-13.2.1-1.fc39.ppc64le 159/160
Running scriptlet: gcc-plugin-annobin-13.2.1-1.fc39.ppc64le 159/160
Installing : perl-generators-1.16-3.fc39.noarch 160/160
Running scriptlet: perl-generators-1.16-3.fc39.noarch 160/160
Verifying : boost-1.81.0-6.fc40.ppc64le 1/160
Verifying : boost-atomic-1.81.0-6.fc40.ppc64le 2/160
Verifying : boost-chrono-1.81.0-6.fc40.ppc64le 3/160
Verifying : boost-container-1.81.0-6.fc40.ppc64le 4/160
Verifying : boost-context-1.81.0-6.fc40.ppc64le 5/160
Verifying : boost-contract-1.81.0-6.fc40.ppc64le 6/160
Verifying : boost-coroutine-1.81.0-6.fc40.ppc64le 7/160
Verifying : boost-date-time-1.81.0-6.fc40.ppc64le 8/160
Verifying : boost-devel-1.81.0-6.fc40.ppc64le 9/160
Verifying : boost-fiber-1.81.0-6.fc40.ppc64le 10/160
Verifying : boost-filesystem-1.81.0-6.fc40.ppc64le 11/160
Verifying : boost-graph-1.81.0-6.fc40.ppc64le 12/160
Verifying : boost-iostreams-1.81.0-6.fc40.ppc64le 13/160
Verifying : boost-json-1.81.0-6.fc40.ppc64le 14/160
Verifying : boost-locale-1.81.0-6.fc40.ppc64le 15/160
Verifying : boost-log-1.81.0-6.fc40.ppc64le 16/160
Verifying : boost-math-1.81.0-6.fc40.ppc64le 17/160
Verifying : boost-nowide-1.81.0-6.fc40.ppc64le 18/160
Verifying : boost-numpy3-1.81.0-6.fc40.ppc64le 19/160
Verifying : boost-program-options-1.81.0-6.fc40.ppc64le 20/160
Verifying : boost-python3-1.81.0-6.fc40.ppc64le 21/160
Verifying : boost-random-1.81.0-6.fc40.ppc64le 22/160
Verifying : boost-regex-1.81.0-6.fc40.ppc64le 23/160
Verifying : boost-serialization-1.81.0-6.fc40.ppc64le 24/160
Verifying : boost-stacktrace-1.81.0-6.fc40.ppc64le 25/160
Verifying : boost-system-1.81.0-6.fc40.ppc64le 26/160
Verifying : boost-test-1.81.0-6.fc40.ppc64le 27/160
Verifying : boost-thread-1.81.0-6.fc40.ppc64le 28/160
Verifying : boost-timer-1.81.0-6.fc40.ppc64le 29/160
Verifying : boost-type_erasure-1.81.0-6.fc40.ppc64le 30/160
Verifying : boost-wave-1.81.0-6.fc40.ppc64le 31/160
Verifying : glibc-devel-2.38.9000-8.fc40.ppc64le 32/160
Verifying : htslib-1.15.1-3.fc40.ppc64le 33/160
Verifying : htslib-devel-1.15.1-3.fc40.ppc64le 34/160
Verifying : zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le 35/160
Verifying : SuperLU-6.0.0-1.fc39.ppc64le 36/160
Verifying : SuperLU-devel-6.0.0-1.fc39.ppc64le 37/160
Verifying : annobin-docs-12.26-1.fc40.noarch 38/160
Verifying : annobin-plugin-gcc-12.26-1.fc40.ppc64le 39/160
Verifying : armadillo-10.8.2-5.fc39.ppc64le 40/160
Verifying : armadillo-devel-10.8.2-5.fc39.ppc64le 41/160
Verifying : arpack-3.8.0-7.fc39.ppc64le 42/160
Verifying : arpack-devel-3.8.0-7.fc39.ppc64le 43/160
Verifying : autoconf-2.71-7.fc40.noarch 44/160
Verifying : automake-1.16.5-14.fc40.noarch 45/160
Verifying : cmake-filesystem-3.27.4-8.fc40.ppc64le 46/160
Verifying : cpp-13.2.1-1.fc39.ppc64le 47/160
Verifying : emacs-filesystem-1:29.1-1.fc39.noarch 48/160
Verifying : expat-2.5.0-3.fc39.ppc64le 49/160
Verifying : flexiblas-3.3.1-5.fc39.ppc64le 50/160
Verifying : flexiblas-devel-3.3.1-5.fc39.ppc64le 51/160
Verifying : flexiblas-netlib-3.3.1-5.fc39.ppc64le 52/160
Verifying : flexiblas-netlib64-3.3.1-5.fc39.ppc64le 53/160
Verifying : flexiblas-openblas-openmp-3.3.1-5.fc39.ppc64le 54/160
Verifying : flexiblas-openblas-openmp64-3.3.1-5.fc39.ppc64le 55/160
Verifying : gc-8.2.2-4.fc39.ppc64le 56/160
Verifying : gcc-13.2.1-1.fc39.ppc64le 57/160
Verifying : gcc-c++-13.2.1-1.fc39.ppc64le 58/160
Verifying : gcc-gfortran-13.2.1-1.fc39.ppc64le 59/160
Verifying : gcc-plugin-annobin-13.2.1-1.fc39.ppc64le 60/160
Verifying : groff-base-1.23.0-2.fc39.ppc64le 61/160
Verifying : gsl-2.7.1-5.fc39.ppc64le 62/160
Verifying : gsl-devel-2.7.1-5.fc39.ppc64le 63/160
Verifying : guile22-2.2.7-9.fc39.ppc64le 64/160
Verifying : hdf5-1.12.1-12.fc39.ppc64le 65/160
Verifying : hdf5-devel-1.12.1-12.fc39.ppc64le 66/160
Verifying : kernel-headers-6.6.0-0.rc1.git0.1.fc40.ppc64le 67/160
Verifying : libaec-1.0.6-5.fc39.ppc64le 68/160
Verifying : libaec-devel-1.0.6-5.fc39.ppc64le 69/160
Verifying : libasan-13.2.1-1.fc39.ppc64le 70/160
Verifying : libatomic-13.2.1-1.fc39.ppc64le 71/160
Verifying : libb2-0.98.1-9.fc39.ppc64le 72/160
Verifying : libgfortran-13.2.1-1.fc39.ppc64le 73/160
Verifying : libicu-73.2-2.fc39.ppc64le 74/160
Verifying : libicu-devel-73.2-2.fc39.ppc64le 75/160
Verifying : libmpc-1.3.1-3.fc39.ppc64le 76/160
Verifying : libquadmath-13.2.1-1.fc39.ppc64le 77/160
Verifying : libquadmath-devel-13.2.1-1.fc39.ppc64le 78/160
Verifying : libstdc++-devel-13.2.1-1.fc39.ppc64le 79/160
Verifying : libtool-ltdl-2.4.7-8.fc40.ppc64le 80/160
Verifying : libubsan-13.2.1-1.fc39.ppc64le 81/160
Verifying : libxcrypt-devel-4.4.36-2.fc39.ppc64le 82/160
Verifying : m4-1.4.19-7.fc40.ppc64le 83/160
Verifying : make-1:4.4.1-2.fc39.ppc64le 84/160
Verifying : metis-5.1.0.3-2.fc39.ppc64le 85/160
Verifying : mpdecimal-2.5.1-7.fc39.ppc64le 86/160
Verifying : ncurses-6.4-7.20230520.fc40.ppc64le 87/160
Verifying : openblas-0.3.21-6.fc39.ppc64le 88/160
Verifying : openblas-openmp-0.3.21-6.fc39.ppc64le 89/160
Verifying : openblas-openmp64-0.3.21-6.fc39.ppc64le 90/160
Verifying : perl-AutoLoader-5.74-500.fc39.noarch 91/160
Verifying : perl-B-1.88-500.fc39.ppc64le 92/160
Verifying : perl-Carp-1.54-500.fc39.noarch 93/160
Verifying : perl-Class-Struct-0.68-500.fc39.noarch 94/160
Verifying : perl-Data-Dumper-2.188-501.fc39.ppc64le 95/160
Verifying : perl-Digest-1.20-500.fc39.noarch 96/160
Verifying : perl-Digest-MD5-2.58-500.fc39.ppc64le 97/160
Verifying : perl-DynaLoader-1.54-500.fc39.ppc64le 98/160
Verifying : perl-Encode-4:3.19-500.fc39.ppc64le 99/160
Verifying : perl-Errno-1.37-500.fc39.ppc64le 100/160
Verifying : perl-Exporter-5.77-500.fc39.noarch 101/160
Verifying : perl-Fcntl-1.15-500.fc39.ppc64le 102/160
Verifying : perl-Fedora-VSP-0.001-32.fc39.noarch 103/160
Verifying : perl-File-Basename-2.86-500.fc39.noarch 104/160
Verifying : perl-File-Compare-1.100.700-500.fc39.noarch 105/160
Verifying : perl-File-Copy-2.41-500.fc39.noarch 106/160
Verifying : perl-File-Find-1.43-500.fc39.noarch 107/160
Verifying : perl-File-Path-2.18-500.fc39.noarch 108/160
Verifying : perl-File-Temp-1:0.231.100-500.fc39.noarch 109/160
Verifying : perl-File-stat-1.13-500.fc39.noarch 110/160
Verifying : perl-FileHandle-2.05-500.fc39.noarch 111/160
Verifying : perl-Getopt-Long-1:2.54-500.fc39.noarch 112/160
Verifying : perl-Getopt-Std-1.13-500.fc39.noarch 113/160
Verifying : perl-HTTP-Tiny-0.088-3.fc39.noarch 114/160
Verifying : perl-IO-1.52-500.fc39.ppc64le 115/160
Verifying : perl-IO-Socket-IP-0.42-1.fc39.noarch 116/160
Verifying : perl-IO-Socket-SSL-2.083-3.fc39.noarch 117/160
Verifying : perl-IPC-Open3-1.22-500.fc39.noarch 118/160
Verifying : perl-MIME-Base64-3.16-500.fc39.ppc64le 119/160
Verifying : perl-Mozilla-CA-20230821-1.fc40.noarch 120/160
Verifying : perl-Net-SSLeay-1.92-10.fc39.ppc64le 121/160
Verifying : perl-POSIX-2.13-500.fc39.ppc64le 122/160
Verifying : perl-PathTools-3.89-500.fc39.ppc64le 123/160
Verifying : perl-Pod-Escapes-1:1.07-501.fc40.noarch 124/160
Verifying : perl-Pod-Perldoc-3.28.01-501.fc39.noarch 125/160
Verifying : perl-Pod-Simple-1:3.45-4.fc39.noarch 126/160
Verifying : perl-Pod-Usage-4:2.03-500.fc39.noarch 127/160
Verifying : perl-Scalar-List-Utils-5:1.63-500.fc39.ppc64le 128/160
Verifying : perl-SelectSaver-1.02-500.fc39.noarch 129/160
Verifying : perl-Socket-4:2.037-3.fc39.ppc64le 130/160
Verifying : perl-Storable-1:3.32-500.fc39.ppc64le 131/160
Verifying : perl-Symbol-1.09-500.fc39.noarch 132/160
Verifying : perl-Term-ANSIColor-5.01-501.fc39.noarch 133/160
Verifying : perl-Term-Cap-1.18-500.fc39.noarch 134/160
Verifying : perl-Text-ParseWords-3.31-500.fc39.noarch 135/160
Verifying : perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch 136/160
Verifying : perl-Thread-Queue-3.14-501.fc40.noarch 137/160
Verifying : perl-Time-Local-2:1.350-3.fc39.noarch 138/160
Verifying : perl-URI-5.21-1.fc40.noarch 139/160
Verifying : perl-base-2.27-500.fc39.noarch 140/160
Verifying : perl-constant-1.33-501.fc39.noarch 141/160
Verifying : perl-generators-1.16-3.fc39.noarch 142/160
Verifying : perl-if-0.61.000-500.fc39.noarch 143/160
Verifying : perl-interpreter-4:5.38.0-500.fc39.ppc64le 144/160
Verifying : perl-libnet-3.15-501.fc39.noarch 145/160
Verifying : perl-libs-4:5.38.0-500.fc39.ppc64le 146/160
Verifying : perl-locale-1.10-500.fc39.noarch 147/160
Verifying : perl-macros-4:5.38.0-500.fc39.noarch 148/160
Verifying : perl-mro-1.28-500.fc39.ppc64le 149/160
Verifying : perl-overload-1.37-500.fc39.noarch 150/160
Verifying : perl-overloading-0.02-500.fc39.noarch 151/160
Verifying : perl-parent-1:0.241-500.fc39.noarch 152/160
Verifying : perl-podlators-1:5.01-500.fc39.noarch 153/160
Verifying : perl-threads-1:2.36-500.fc39.ppc64le 154/160
Verifying : perl-threads-shared-1.68-500.fc39.ppc64le 155/160
Verifying : perl-vars-1.05-500.fc39.noarch 156/160
Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 157/160
Verifying : python3-3.12.0~rc2-1.fc40.ppc64le 158/160
Verifying : python3-libs-3.12.0~rc2-1.fc40.ppc64le 159/160
Verifying : python3-numpy-1:1.24.4-2.fc39.ppc64le 160/160
Installed:
SuperLU-6.0.0-1.fc39.ppc64le
SuperLU-devel-6.0.0-1.fc39.ppc64le
annobin-docs-12.26-1.fc40.noarch
annobin-plugin-gcc-12.26-1.fc40.ppc64le
armadillo-10.8.2-5.fc39.ppc64le
armadillo-devel-10.8.2-5.fc39.ppc64le
arpack-3.8.0-7.fc39.ppc64le
arpack-devel-3.8.0-7.fc39.ppc64le
autoconf-2.71-7.fc40.noarch
automake-1.16.5-14.fc40.noarch
boost-1.81.0-6.fc40.ppc64le
boost-atomic-1.81.0-6.fc40.ppc64le
boost-chrono-1.81.0-6.fc40.ppc64le
boost-container-1.81.0-6.fc40.ppc64le
boost-context-1.81.0-6.fc40.ppc64le
boost-contract-1.81.0-6.fc40.ppc64le
boost-coroutine-1.81.0-6.fc40.ppc64le
boost-date-time-1.81.0-6.fc40.ppc64le
boost-devel-1.81.0-6.fc40.ppc64le
boost-fiber-1.81.0-6.fc40.ppc64le
boost-filesystem-1.81.0-6.fc40.ppc64le
boost-graph-1.81.0-6.fc40.ppc64le
boost-iostreams-1.81.0-6.fc40.ppc64le
boost-json-1.81.0-6.fc40.ppc64le
boost-locale-1.81.0-6.fc40.ppc64le
boost-log-1.81.0-6.fc40.ppc64le
boost-math-1.81.0-6.fc40.ppc64le
boost-nowide-1.81.0-6.fc40.ppc64le
boost-numpy3-1.81.0-6.fc40.ppc64le
boost-program-options-1.81.0-6.fc40.ppc64le
boost-python3-1.81.0-6.fc40.ppc64le
boost-random-1.81.0-6.fc40.ppc64le
boost-regex-1.81.0-6.fc40.ppc64le
boost-serialization-1.81.0-6.fc40.ppc64le
boost-stacktrace-1.81.0-6.fc40.ppc64le
boost-system-1.81.0-6.fc40.ppc64le
boost-test-1.81.0-6.fc40.ppc64le
boost-thread-1.81.0-6.fc40.ppc64le
boost-timer-1.81.0-6.fc40.ppc64le
boost-type_erasure-1.81.0-6.fc40.ppc64le
boost-wave-1.81.0-6.fc40.ppc64le
cmake-filesystem-3.27.4-8.fc40.ppc64le
cpp-13.2.1-1.fc39.ppc64le
emacs-filesystem-1:29.1-1.fc39.noarch
expat-2.5.0-3.fc39.ppc64le
flexiblas-3.3.1-5.fc39.ppc64le
flexiblas-devel-3.3.1-5.fc39.ppc64le
flexiblas-netlib-3.3.1-5.fc39.ppc64le
flexiblas-netlib64-3.3.1-5.fc39.ppc64le
flexiblas-openblas-openmp-3.3.1-5.fc39.ppc64le
flexiblas-openblas-openmp64-3.3.1-5.fc39.ppc64le
gc-8.2.2-4.fc39.ppc64le
gcc-13.2.1-1.fc39.ppc64le
gcc-c++-13.2.1-1.fc39.ppc64le
gcc-gfortran-13.2.1-1.fc39.ppc64le
gcc-plugin-annobin-13.2.1-1.fc39.ppc64le
glibc-devel-2.38.9000-8.fc40.ppc64le
groff-base-1.23.0-2.fc39.ppc64le
gsl-2.7.1-5.fc39.ppc64le
gsl-devel-2.7.1-5.fc39.ppc64le
guile22-2.2.7-9.fc39.ppc64le
hdf5-1.12.1-12.fc39.ppc64le
hdf5-devel-1.12.1-12.fc39.ppc64le
htslib-1.15.1-3.fc40.ppc64le
htslib-devel-1.15.1-3.fc40.ppc64le
kernel-headers-6.6.0-0.rc1.git0.1.fc40.ppc64le
libaec-1.0.6-5.fc39.ppc64le
libaec-devel-1.0.6-5.fc39.ppc64le
libasan-13.2.1-1.fc39.ppc64le
libatomic-13.2.1-1.fc39.ppc64le
libb2-0.98.1-9.fc39.ppc64le
libgfortran-13.2.1-1.fc39.ppc64le
libicu-73.2-2.fc39.ppc64le
libicu-devel-73.2-2.fc39.ppc64le
libmpc-1.3.1-3.fc39.ppc64le
libquadmath-13.2.1-1.fc39.ppc64le
libquadmath-devel-13.2.1-1.fc39.ppc64le
libstdc++-devel-13.2.1-1.fc39.ppc64le
libtool-ltdl-2.4.7-8.fc40.ppc64le
libubsan-13.2.1-1.fc39.ppc64le
libxcrypt-devel-4.4.36-2.fc39.ppc64le
m4-1.4.19-7.fc40.ppc64le
make-1:4.4.1-2.fc39.ppc64le
metis-5.1.0.3-2.fc39.ppc64le
mpdecimal-2.5.1-7.fc39.ppc64le
ncurses-6.4-7.20230520.fc40.ppc64le
openblas-0.3.21-6.fc39.ppc64le
openblas-openmp-0.3.21-6.fc39.ppc64le
openblas-openmp64-0.3.21-6.fc39.ppc64le
perl-AutoLoader-5.74-500.fc39.noarch
perl-B-1.88-500.fc39.ppc64le
perl-Carp-1.54-500.fc39.noarch
perl-Class-Struct-0.68-500.fc39.noarch
perl-Data-Dumper-2.188-501.fc39.ppc64le
perl-Digest-1.20-500.fc39.noarch
perl-Digest-MD5-2.58-500.fc39.ppc64le
perl-DynaLoader-1.54-500.fc39.ppc64le
perl-Encode-4:3.19-500.fc39.ppc64le
perl-Errno-1.37-500.fc39.ppc64le
perl-Exporter-5.77-500.fc39.noarch
perl-Fcntl-1.15-500.fc39.ppc64le
perl-Fedora-VSP-0.001-32.fc39.noarch
perl-File-Basename-2.86-500.fc39.noarch
perl-File-Compare-1.100.700-500.fc39.noarch
perl-File-Copy-2.41-500.fc39.noarch
perl-File-Find-1.43-500.fc39.noarch
perl-File-Path-2.18-500.fc39.noarch
perl-File-Temp-1:0.231.100-500.fc39.noarch
perl-File-stat-1.13-500.fc39.noarch
perl-FileHandle-2.05-500.fc39.noarch
perl-Getopt-Long-1:2.54-500.fc39.noarch
perl-Getopt-Std-1.13-500.fc39.noarch
perl-HTTP-Tiny-0.088-3.fc39.noarch
perl-IO-1.52-500.fc39.ppc64le
perl-IO-Socket-IP-0.42-1.fc39.noarch
perl-IO-Socket-SSL-2.083-3.fc39.noarch
perl-IPC-Open3-1.22-500.fc39.noarch
perl-MIME-Base64-3.16-500.fc39.ppc64le
perl-Mozilla-CA-20230821-1.fc40.noarch
perl-Net-SSLeay-1.92-10.fc39.ppc64le
perl-POSIX-2.13-500.fc39.ppc64le
perl-PathTools-3.89-500.fc39.ppc64le
perl-Pod-Escapes-1:1.07-501.fc40.noarch
perl-Pod-Perldoc-3.28.01-501.fc39.noarch
perl-Pod-Simple-1:3.45-4.fc39.noarch
perl-Pod-Usage-4:2.03-500.fc39.noarch
perl-Scalar-List-Utils-5:1.63-500.fc39.ppc64le
perl-SelectSaver-1.02-500.fc39.noarch
perl-Socket-4:2.037-3.fc39.ppc64le
perl-Storable-1:3.32-500.fc39.ppc64le
perl-Symbol-1.09-500.fc39.noarch
perl-Term-ANSIColor-5.01-501.fc39.noarch
perl-Term-Cap-1.18-500.fc39.noarch
perl-Text-ParseWords-3.31-500.fc39.noarch
perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch
perl-Thread-Queue-3.14-501.fc40.noarch
perl-Time-Local-2:1.350-3.fc39.noarch
perl-URI-5.21-1.fc40.noarch
perl-base-2.27-500.fc39.noarch
perl-constant-1.33-501.fc39.noarch
perl-generators-1.16-3.fc39.noarch
perl-if-0.61.000-500.fc39.noarch
perl-interpreter-4:5.38.0-500.fc39.ppc64le
perl-libnet-3.15-501.fc39.noarch
perl-libs-4:5.38.0-500.fc39.ppc64le
perl-locale-1.10-500.fc39.noarch
perl-macros-4:5.38.0-500.fc39.noarch
perl-mro-1.28-500.fc39.ppc64le
perl-overload-1.37-500.fc39.noarch
perl-overloading-0.02-500.fc39.noarch
perl-parent-1:0.241-500.fc39.noarch
perl-podlators-1:5.01-500.fc39.noarch
perl-threads-1:2.36-500.fc39.ppc64le
perl-threads-shared-1.68-500.fc39.ppc64le
perl-vars-1.05-500.fc39.noarch
python-pip-wheel-23.2.1-1.fc39.noarch
python3-3.12.0~rc2-1.fc40.ppc64le
python3-libs-3.12.0~rc2-1.fc40.ppc64le
python3-numpy-1:1.24.4-2.fc39.ppc64le
zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le
Complete!
Finish: build setup for mmseq-1.0.11-16.fc40.src.rpm
Start: rpmbuild mmseq-1.0.11-16.fc40.src.rpm
warning: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N)
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689811200
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.U2v0om
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf mmseq-1.0.11
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/1.0.11.zip
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd mmseq-1.0.11
+ rm -rf /builddir/build/BUILD/mmseq-1.0.11-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/mmseq-1.0.11-SPECPARTS
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
Patch #2 (mmseq-zlib.patch):
+ echo 'Patch #2 (mmseq-zlib.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .mmseq-zlib.patch --fuzz=0
patching file src/Makefile
+ rm -f bin/offsetGTF-linux bin/postdiff-linux
+ sed -e s/-lblas/-lflexiblas/g -e s/-llapack/-lflexiblas/g -i src/Makefile
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.4Lfcml
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd mmseq-1.0.11
+ cd src
+ make -j2 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
g++ -O3 -c sokal.cc
g++ -fopenmp -O3 -c uh.cpp
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 hitsio.cpp hitsio.hpp -c hitsio.cpp
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c -o fasta.o fasta.c
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -O3 offsetGTF.cpp -o ../bin/offsetGTF
offsetGTF.cpp: In function ‘int main(int, char**)’:
offsetGTF.cpp:115:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
115 | while(gff_ind < gff_positions[chrom].size()) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
offsetGTF.cpp:117:57: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare]
117 | pos + tokens[3].size() - tokens[4].size() >= gff_positions[chrom][gff_ind]) {
offsetGTF.cpp:114:11: warning: unused variable ‘curoff’ [-Wunused-variable]
114 | int curoff=offset;
| ^~~~~~
offsetGTF.cpp:150:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
150 | while(gff_ind < gff_positions[prevchrom].size()) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
offsetGTF.cpp:163:53: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare]
163 | pos + tokens[3].size() - tokens[4].size() >= gff_positions[chrom][gff_ind]) {
offsetGTF.cpp:177:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
177 | while(gff_ind < gff_positions[chrom].size() && gff_positions[chrom][gff_ind] <= pos) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
offsetGTF.cpp:235:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
235 | for(int i=5; i < tokens.size(); i++) {
| ~~^~~~~~~~~~~~~~~
offsetGTF.cpp:237:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
237 | if(i < tokens.size()-1) {
| ~~^~~~~~~~~~~~~~~~~
offsetGTF.cpp:108:7: warning: unused variable ‘gff_pos’ [-Wunused-variable]
108 | int gff_pos= -1;
| ^~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeHeaderSchema0()’:
hitsio.cpp:163:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
163 | for(int i = 0; i < transcriptName.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeReadMapRecordSchema0()’:
hitsio.cpp:184:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
184 | for(int i = 0; i < currentReadTranscripts.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeHeaderSchema1()’:
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
24 | if (VAL > numeric_limits<uint32_t>::max()) { \
| ^
hitsio.cpp:191:9: note: in expansion of macro ‘WRITE_UINT’
191 | WRITE_UINT(ofs, hitsfileSchema);
| ^~~~~~~~~~
hitsio.cpp:193:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
193 | for(int i = 0; i < transcriptName.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: ‘std::map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
24 | if (VAL > numeric_limits<uint32_t>::max()) { \
hitsio.cpp:196:17: note: in expansion of macro ‘WRITE_UINT’
196 | WRITE_UINT(ofs, transcriptTrueLength[transcriptName[i] ])
| ^~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeReadMapRecordSchema1()’:
hitsio.cpp:236:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
236 | for(int i = 0; i < currentReadTranscripts.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileReader::readHeaderSchema1(std::vector<std::__cxx11::basic_string<char> >*, std::map<std::__cxx11::basic_string<char>, double>*, std::map<std::__cxx11::basic_string<char>, int>*, std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >*, std::vector<std::vector<std::__cxx11::basic_string<char> > >*)’:
hitsio.cpp:356:16: warning: unused variable ‘nextStrLen’ [-Wunused-variable]
356 | size_t nextStrLen;
| ^~~~~~~~~~
hitsio.cpp: In member function ‘bool HitsfileReader::readReadMapRecordTranscriptID(std::string&)’:
hitsio.cpp:447:1: warning: control reaches end of non-void function [-Wreturn-type]
447 | }
| ^
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -O3 t2g_hits.cpp -o ../bin/t2g_hits
t2g_hits.cpp: In function ‘int main(int, char**)’:
t2g_hits.cpp:90:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
90 | for(int i=2; i < tokens.size(); i++) {
| ~~^~~~~~~~~~~~~~~
g++ -DVERSION=1.0.11 -DARMA_64BIT_WORD -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 uh.o sokal.o mmcollapse.cpp -o ../bin/mmcollapse -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
mmcollapse.cpp: In function ‘void get_unidentifiable_transcripts(std::string, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, std::map<std::__cxx11::basic_string<char>, double> >&, std::map<std::__cxx11::basic_string<char>, std::map<std::__cxx11::basic_string<char>, double> >&, std::map<std::__cxx11::basic_string<char>, std::map<std::__cxx11::basic_string<char>, double> >&, std::map<std::__cxx11::basic_string<char>, int>&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, bool>&)’:
mmcollapse.cpp:158:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
158 | for(int i=0; i < tokens.size(); i++) {
| ~~^~~~~~~~~~~~~~~
mmcollapse.cpp:213:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
213 | for(int i=0; i < tokens2.size(); i++) isIdent[tokens2[i]]=1;
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:259:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
259 | for(int i=0; i < tokens.size(); i++) {
| ~~^~~~~~~~~~~~~~~
mmcollapse.cpp: In function ‘void collapse(arma::cube&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, int>&, std::vector<int, std::allocator<int> >)’:
mmcollapse.cpp:400:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
400 | for(int s=0; s < R.n_slices; s++) {
| ~~^~~~~~~~~~~~
mmcollapse.cpp:401:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
401 | for(int t=0; t < candidates.size(); t++) {
| ~~^~~~~~~~~~~~~~~~~~~
mmcollapse.cpp:402:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
402 | for(int j=1; j < indexes.size(); j++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:414:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
414 | for(int j=1; j < indexes.size(); j++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:417:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
417 | for(int i=0; i < R.n_cols; i++) {
| ~~^~~~~~~~~~
mmcollapse.cpp:426:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
426 | for(int i=0; i < indexes.size(); i++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:431:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
431 | for(int i=1; i < tset.size(); i++) {
| ~~^~~~~~~~~~~~~
mmcollapse.cpp:437:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
437 | for(int i=1; i < indexes.size(); i++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp: In function ‘std::map<int, int> join_traces(arma::mat&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >)’:
mmcollapse.cpp:445:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
445 | for(int t=0; t < allnames.size(); t++) tmap[allnames[t]]=t;
| ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:452:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
452 | for(int c=0; c < candidates.size(); c++) {
| ~~^~~~~~~~~~~~~~~~~~~
mmcollapse.cpp:456:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
456 | for(int t=0; t < tokens.size(); t++) {
| ~~^~~~~~~~~~~~~~~
mmcollapse.cpp:464:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
464 | for(int t=1; t < indexes.size(); t++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:469:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
469 | for(int t=1; t < indexes.size(); t++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:476:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
476 | for(int i=0; i < toshed.size(); i++) {
| ~~^~~~~~~~~~~~~~~
mmcollapse.cpp: In function ‘void mean_corrs(const arma::cube&, const arma::umat&, arma::mat&, arma::mat&, std::vector<int, std::allocator<int> >, std::vector<int, std::allocator<int> >, double)’:
mmcollapse.cpp:486:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
486 | for(int v= 0; v < R.n_rows; v++) {
| ~~^~~~~~~~~~
mmcollapse.cpp:492:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare]
492 | for(int i=0; i < u.size(); i++) {
| ~~^~~~~~~~~~
mmcollapse.cpp: In function ‘void get_corrs(arma::cube&, arma::mat&, const std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, int>&)’:
mmcollapse.cpp:519:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
519 | for(int s=0; s < basenames.size(); s++) {
| ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:543:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
543 | for(int t=0; t < tokens.size(); t++) {
| ~~^~~~~~~~~~~~~~~
mmcollapse.cpp: In function ‘int main(int, char**)’:
mmcollapse.cpp:632:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
632 | for(int i=1; i < basenames.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:691:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
691 | for(int s=0; s < basenames.size(); s++) {
| ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:707:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
707 | for(int i=0; i < candidates.size(); i++) ts.push_back(i);
| ~~^~~~~~~~~~~~~~~~~~~
mmcollapse.cpp:732:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
732 | for(int i=0 ;i < maxcorrs.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:738:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
738 | for(int i=0 ;i < mincorrs.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:802:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
802 | for(int i=0 ;i < maxcorrs.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:808:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
808 | for(int i=0 ;i < mincorrs.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:827:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
827 | for(int s=0; s < basenames.size(); s++) {
| ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:852:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
852 | for(int t=0; t < tokens.size(); t++) {
| ~~^~~~~~~~~~~~~~~
mmcollapse.cpp:882:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
882 | for(int t=0; t < tokens2.size(); t++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:934:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
934 | for(int t=0; t < M.n_cols; t++) {
| ~~^~~~~~~~~~
mmcollapse.cpp:963:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
963 | for(int i=1; i < tokens2.size(); i++) {
| ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:976:21: warning: comparison of integer expressions of different signedness: ‘boost::numeric::ublas::compressed_matrix<bool>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
976 | if(MM.size1() < i+1 ) factor1=2;
| ~~~~~~~~~~~^~~~~
mmcollapse.cpp:977:21: warning: comparison of integer expressions of different signedness: ‘boost::numeric::ublas::compressed_matrix<bool>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
977 | if(MM.size2() < j+1 ) factor2=2;
| ~~~~~~~~~~~^~~~~
mmcollapse.cpp:1010:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1010 | for(int t=0; t < ids.size(); t++) {
| ~~^~~~~~~~~~~~
mmcollapse.cpp:1083:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1083 | for(int i=0; i < ids.size(); i++) {
| ~~^~~~~~~~~~~~
mmcollapse.cpp:1092:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1092 | for(int v = 0; v < M.n_cols; v++) {
| ~~^~~~~~~~~~
mmcollapse.cpp:840:9: warning: unused variable ‘isident’ [-Wunused-variable]
840 | int isident=0;
| ^~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeHeaderSchema0()’:
hitsio.cpp:163:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
163 | for(int i = 0; i < transcriptName.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeReadMapRecordSchema0()’:
hitsio.cpp:184:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
184 | for(int i = 0; i < currentReadTranscripts.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeHeaderSchema1()’:
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
24 | if (VAL > numeric_limits<uint32_t>::max()) { \
| ^
hitsio.cpp:191:9: note: in expansion of macro ‘WRITE_UINT’
191 | WRITE_UINT(ofs, hitsfileSchema);
| ^~~~~~~~~~
hitsio.cpp:193:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
193 | for(int i = 0; i < transcriptName.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: ‘std::map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
24 | if (VAL > numeric_limits<uint32_t>::max()) { \
hitsio.cpp:196:17: note: in expansion of macro ‘WRITE_UINT’
196 | WRITE_UINT(ofs, transcriptTrueLength[transcriptName[i] ])
| ^~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileWriter::writeReadMapRecordSchema1()’:
hitsio.cpp:236:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
236 | for(int i = 0; i < currentReadTranscripts.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function ‘void HitsfileReader::readHeaderSchema1(std::vector<std::__cxx11::basic_string<char> >*, std::map<std::__cxx11::basic_string<char>, double>*, std::map<std::__cxx11::basic_string<char>, int>*, std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >*, std::vector<std::vector<std::__cxx11::basic_string<char> > >*)’:
hitsio.cpp:356:16: warning: unused variable ‘nextStrLen’ [-Wunused-variable]
356 | size_t nextStrLen;
| ^~~~~~~~~~
hitsio.cpp: In member function ‘bool HitsfileReader::readReadMapRecordTranscriptID(std::string&)’:
hitsio.cpp:447:1: warning: control reaches end of non-void function [-Wreturn-type]
447 | }
| ^
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O2 bms.cpp bms.hpp -c bms.cpp
bms.cpp: In member function ‘arma::Col<int> BMS::m2v(arma::Mat<double>)’:
bms.cpp:36:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
36 | for(int i=0; i < P.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:37:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
37 | for(int j=0; j < P.n_rows; j++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘std::vector<double> BMS::meanvar(arma::Col<double>)’:
bms.cpp:76:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
76 | for(int i=0;i < v.n_elem; i++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘void BMS::print(bool)’:
bms.cpp:93:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
93 | for(int feature=0; feature < y->n_rows; feature++) {
| ~~~~~~~~^~~~~~~~~~~
bms.cpp:97:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
97 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:102:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
102 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::printtune(int)’:
bms.cpp:132:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
132 | for(int feature=0; feature < y->n_rows; feature++) {
| ~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_alpha()’:
bms.cpp:185:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
185 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_beta()’:
bms.cpp:253:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
253 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:255:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
255 | for(int b=0; b < M.n_cols; b++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_eta()’:
bms.cpp:332:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
332 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:334:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
334 | for(int c=0; c < P[model].n_cols; c++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_sigmasq()’:
bms.cpp:415:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
415 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_lambda()’:
bms.cpp:504:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
504 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:506:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
506 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_rho()’:
bms.cpp:559:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
559 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::copy_pseudo()’:
bms.cpp:582:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
582 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:585:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
585 | for(int c=0; c < P[0].n_cols; c++) {
| ~~^~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_alpha(int, int, bool)’:
bms.cpp:603:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
603 | for(int j=0; j < y->n_cols; j++) {
| ~~^~~~~~~~~~~
bms.cpp:610:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
610 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_beta(int, int, bool)’:
bms.cpp:631:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
631 | for(int j=0; j < y->n_cols; j++) {
| ~~^~~~~~~~~~~
bms.cpp:638:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
638 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:646:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
646 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:651:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
651 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_eta(int, int, bool)’:
bms.cpp:663:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
663 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:666:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
666 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:673:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
673 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:681:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
681 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:686:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
686 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_lambda(int, int, bool)’:
bms.cpp:699:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
699 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:704:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
704 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:711:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
711 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_sigmasq(int, int, bool, bool)’:
bms.cpp:729:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
729 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:740:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
740 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:751:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
751 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:763:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
763 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_sigmasq_RW(int, int, bool, bool)’:
bms.cpp:877:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
877 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘double BMS::log_target_posterior(int, int)’:
bms.cpp:931:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
931 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:940:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
940 | for(int j=0; j < M.n_cols; j++) {
| ~~^~~~~~~~~~
bms.cpp:947:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
947 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘double BMS::log_target_pseudo(int, int)’:
bms.cpp:968:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
968 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
bms.cpp:974:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
974 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::print_pseudo()’:
bms.cpp:1086:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1086 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
bms.cpp:1089:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1089 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:1100:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1100 | for(int i=0; i < y->n_rows; i++) {
| ~~^~~~~~~~~~~
bms.cpp:1103:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1103 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
bms.cpp:1106:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1106 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In constructor ‘BMS::BMS(const arma::Mat<double>*, const arma::Mat<double>&, arma::Mat<double>, arma::Mat<double>, arma::Mat<double>, arma::Mat<int>, double, double, double, std::string, gsl_rng**, int, bool)’:
bms.cpp:1188:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1188 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:1192:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1192 | if(C(i,model)+1 > _n.size()) {
| ~~~~~~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::initialise_streams(std::string)’:
bms.cpp:1348:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1348 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:1354:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1354 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:1360:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1360 | for(int i=0; i < P[0].n_cols; i++) {
| ~~^~~~~~~~~~~~~
bms.cpp:1366:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1366 | for(int i=0; i < P[1].n_cols; i++) {
| ~~^~~~~~~~~~~~~
bms.cpp:1372:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1372 | for(int i=0; i < P[0].n_cols; i++) {
| ~~^~~~~~~~~~~~~
bms.cpp:1378:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1378 | for(int i=0; i < P[1].n_cols; i++) {
| ~~^~~~~~~~~~~~~
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 sokal.o uh.o hitsio.o mmseq.cpp -o ../bin/mmseq -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
mmseq.cpp: In function ‘std::vector<double> meanvar(std::vector<double>, double, double)’:
mmseq.cpp:130:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
130 | for(int i=0;i < v.size(); i++) {
| ~~^~~~~~~~~~
mmseq.cpp: In function ‘int main(int, char**)’:
mmseq.cpp:244:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
244 | for(int i=0; i < tokens.size(); i++) {
| ~~^~~~~~~~~~~~~~~
mmseq.cpp:423:20: warning: comparison of integer expressions of different signedness: ‘boost::numeric::ublas::compressed_matrix<bool>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
423 | if(M.size1() < m ) factor1=2;
| ~~~~~~~~~~^~~
mmseq.cpp:424:20: warning: comparison of integer expressions of different signedness: ‘boost::numeric::ublas::compressed_matrix<bool>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
424 | if(M.size2() < n ) factor2=2;
| ~~~~~~~~~~^~~
mmseq.cpp:594:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
594 | for(unsigned t=0; t < n; t++) {
| ~~^~~
mmseq.cpp:736:25: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
736 | for(unsigned t=0; t < n; t++)
| ~~^~~
mmseq.cpp:765:27: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
765 | for(unsigned t=0; t < n; t++)
| ~~^~~
mmseq.cpp:774:11: warning: unused variable ‘threadid’ [-Wunused-variable]
774 | int threadid=OMP_GET_THREAD_NUM;
| ^~~~~~~~
mmseq.cpp:829:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
829 | for(unsigned t=0; t < n; t++)
| ~~^~~
mmseq.cpp:912:27: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
912 | for(unsigned t=0; t < n; t++) {
| ~~^~~
mmseq.cpp:940:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
940 | for(int i=0; i < identical_transcripts.size() * trace_length; i++) mu_trace_identical[i]=0;
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:961:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
961 | for(int i=0; i < gene2transcripts.size() * trace_length; i++) mu_trace_gene[i]=0;
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1098:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
1098 | for(unsigned t=0; t < n; t++) gofs << indexSid[t] << " ";
| ~~^~~
mmseq.cpp:1112:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1112 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1136:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1136 | for(int j=0; j < percentiles.size(); j++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1144:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1144 | for(int j=0; j < percentiles.size(); j++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1149:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1149 | for(int i=0;i < identical_transcripts.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1156:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1156 | for(int j=0; j < percentiles.size(); j++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1161:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1161 | for(int i=0;i < gene2transcripts.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1168:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1168 | for(int j=0; j < percentiles.size(); j++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1179:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1179 | for(int j=0; j < percentiles.size(); j++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1189:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1189 | for(int j=0; j < percentiles.size(); j++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1208:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1208 | for(int t=0; t < identical_transcripts.size() ; t++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1212:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1212 | for(int t=0; t < gene2transcripts.size(); t++){
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1226:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1226 | for(int i=0; i < identical_transcripts.size() ; i++) meanmu_identical[i] /= trace_length;
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1227:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1227 | for(int i=0; i < gene2transcripts.size(); i++) meanmu_gene[i]/= trace_length;
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1330:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1330 | for(int t=0; t < identical_transcripts.size(); t++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1349:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1349 | for(int g=0; g < gene2transcripts.size(); g++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1473:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1473 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1475:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1475 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1482:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1482 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1484:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1484 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1506:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1506 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1508:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1508 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1514:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1514 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1516:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1516 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1536:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1536 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1538:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1538 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1544:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1544 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1546:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1546 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1560:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1560 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1562:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1562 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1582:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1582 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1584:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1584 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1599:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1599 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1601:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1601 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1619:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1619 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1621:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1621 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1644:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1644 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1646:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1646 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1656:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1656 | for(int i=0; i < percentiles.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1658:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1658 | if(i==percentiles.size()-1) {
| ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:308:8: warning: unused variable ‘buf16384’ [-Wunused-variable]
308 | char buf16384[16384];
| ^~~~~~~~
mmseq.cpp:391:8: warning: variable ‘doublehit’ set but not used [-Wunused-but-set-variable]
391 | bool doublehit;
| ^~~~~~~~~
bms.cpp: In member function ‘arma::Col<int> BMS::m2v(arma::Mat<double>)’:
bms.cpp:36:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
36 | for(int i=0; i < P.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:37:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
37 | for(int j=0; j < P.n_rows; j++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘std::vector<double> BMS::meanvar(arma::Col<double>)’:
bms.cpp:76:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
76 | for(int i=0;i < v.n_elem; i++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘void BMS::print(bool)’:
bms.cpp:93:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
93 | for(int feature=0; feature < y->n_rows; feature++) {
| ~~~~~~~~^~~~~~~~~~~
bms.cpp:97:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
97 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:102:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
102 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::printtune(int)’:
bms.cpp:132:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
132 | for(int feature=0; feature < y->n_rows; feature++) {
| ~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_alpha()’:
bms.cpp:185:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
185 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_beta()’:
bms.cpp:253:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
253 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:255:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
255 | for(int b=0; b < M.n_cols; b++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_eta()’:
bms.cpp:332:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
332 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:334:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
334 | for(int c=0; c < P[model].n_cols; c++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_sigmasq()’:
bms.cpp:415:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
415 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_lambda()’:
bms.cpp:504:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
504 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:506:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
506 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::set_pseudoprior_rho()’:
bms.cpp:559:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
559 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::copy_pseudo()’:
bms.cpp:582:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
582 | for(int j=0; j < y->n_rows; j++) {
| ~~^~~~~~~~~~~
bms.cpp:585:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
585 | for(int c=0; c < P[0].n_cols; c++) {
| ~~^~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_alpha(int, int, bool)’:
bms.cpp:603:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
603 | for(int j=0; j < y->n_cols; j++) {
| ~~^~~~~~~~~~~
bms.cpp:610:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
610 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_beta(int, int, bool)’:
bms.cpp:631:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
631 | for(int j=0; j < y->n_cols; j++) {
| ~~^~~~~~~~~~~
bms.cpp:638:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
638 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:646:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
646 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:651:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
651 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_eta(int, int, bool)’:
bms.cpp:663:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
663 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:666:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
666 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:673:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
673 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:681:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
681 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:686:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
686 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_lambda(int, int, bool)’:
bms.cpp:699:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
699 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:704:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
704 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:711:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
711 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_sigmasq(int, int, bool, bool)’:
bms.cpp:729:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
729 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:740:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
740 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:751:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
751 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:763:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
763 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::update_sigmasq_RW(int, int, bool, bool)’:
bms.cpp:877:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
877 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp: In member function ‘double BMS::log_target_posterior(int, int)’:
bms.cpp:931:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
931 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:940:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
940 | for(int j=0; j < M.n_cols; j++) {
| ~~^~~~~~~~~~
bms.cpp:947:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
947 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘double BMS::log_target_pseudo(int, int)’:
bms.cpp:968:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
968 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
bms.cpp:974:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
974 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function ‘void BMS::print_pseudo()’:
bms.cpp:1086:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1086 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
bms.cpp:1089:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1089 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp:1100:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1100 | for(int i=0; i < y->n_rows; i++) {
| ~~^~~~~~~~~~~
bms.cpp:1103:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1103 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
bms.cpp:1106:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1106 | for(int l=0; l < P[model].n_cols; l++) {
| ~~^~~~~~~~~~~~~~~~~
bms.cpp: In constructor ‘BMS::BMS(const arma::Mat<double>*, const arma::Mat<double>&, arma::Mat<double>, arma::Mat<double>, arma::Mat<double>, arma::Mat<int>, double, double, double, std::string, gsl_rng**, int, bool)’:
bms.cpp:1188:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1188 | for(int i=0; i < y->n_cols; i++) {
| ~~^~~~~~~~~~~
bms.cpp:1192:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
1192 | if(C(i,model)+1 > _n.size()) {
| ~~~~~~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function ‘void BMS::initialise_streams(std::string)’:
bms.cpp:1348:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1348 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:1354:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1354 | for(int i=0; i < M.n_cols; i++) {
| ~~^~~~~~~~~~
bms.cpp:1360:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1360 | for(int i=0; i < P[0].n_cols; i++) {
| ~~^~~~~~~~~~~~~
bms.cpp:1366:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1366 | for(int i=0; i < P[1].n_cols; i++) {
| ~~^~~~~~~~~~~~~
bms.cpp:1372:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1372 | for(int i=0; i < P[0].n_cols; i++) {
| ~~^~~~~~~~~~~~~
bms.cpp:1378:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
1378 | for(int i=0; i < P[1].n_cols; i++) {
| ~~^~~~~~~~~~~~~
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 fasta.o hitsio.o bam2hits.cpp -o ../bin/bam2hits -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
bam2hits.cpp: In function ‘void outputMergeHeaders(std::vector<FastaRecord>&, char, const char*, bool, HitsfileWriter&)’:
bam2hits.cpp:109:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<FastaRecord>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
109 | for(int i=0; i < sortedfastas.size()-1; i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:119:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<FastaRecord>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
119 | for(int j=0; j < curSet.size()-1; j++) {
| ~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<FastaRecord>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
137 | for(int j=0; j < curSet.size()-1; j++) {
| ~~^~~~~~~~~~~~~~~~~
bam2hits.cpp: In function ‘std::vector<Alignment> repetitiveTranscriptFilter(std::vector<Alignment>&, int)’:
bam2hits.cpp:218:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Alignment>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
218 | for(int j=0; j < alns.size(); j++) {
| ~~^~~~~~~~~~~~~
bam2hits.cpp:219:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
219 | if(i < torem.size() && j==torem[i]) {
| ~~^~~~~~~~~~~~~~
bam2hits.cpp: In function ‘int main(int, char**)’:
bam2hits.cpp:518:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
518 | if(_B != tg[0].size()-2) {
| ~~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:520:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
520 | if(_A == tg[0].size()-2) {
| ~~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:522:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
522 | if(_A != tg[1].size()-2) {
| ~~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:558:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
558 | for(int i=1; i < tokens2.size(); i++) {
| ~~^~~~~~~~~~~~~~~~
bam2hits.cpp:609:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<FastaRecord>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
609 | for(int i=0; i < fastas.size(); i++) {
| ~~^~~~~~~~~~~~~~~
bam2hits.cpp:645:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<FastaRecord>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
645 | for(int i=0;i < fastas.size(); i++) transcriptCounts[i] /= (double)fastas[i].seq().size();
| ~~^~~~~~~~~~~~~~~
bam2hits.cpp:659:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<FastaRecord>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
659 | for(int i=0; i < fastas.size(); i++) {
| ~~^~~~~~~~~~~~~~~
bam2hits.cpp:662:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
662 | for(int j =0; j < fastas[i].seq().size(); j++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:663:44: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
663 | int tag = (j <= MSEQ_BEFORE || j >= fastas[i].seq().size()-MSEQ_AFTER) ? -2 : 0;
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:791:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
791 | for(int j=MSEQ_BEFORE + 1; j <= fastas[i].seq().length()-MSEQ_AFTER; j++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:920:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
920 | for(int j=1; j < frequencies.size()-WINDOWFORISIZEMODE + 1; j++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:948:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
948 | for(int i=0; i < testIsizes.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~
bam2hits.cpp:959:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
959 | for(int i=0; i < heights.size(); i++) {
| ~~^~~~~~~~~~~~~~~~
bam2hits.cpp:997:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
997 | for(int fl=1; fl <= (it->seq()).size(); fl++) {
| ~~~^~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:1091:56: warning: comparing the result of pointer addition ‘(bam_aux_get(((const bam1_t*)line), ((const char*)"NM")) + ((sizetype)ait.__gnu_cxx::__normal_iterator<Alignment*, std::vector<Alignment> >::operator->()->Alignment::NM()))’ and NULL [-Waddress]
1091 | ait->NM(ait->NM() + bam_aux_get(line,"NM") == NULL ? 0 : bam_aux2i(bam_aux_get(line,"NM")));
| ^
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -O3 fasta.o extract_transcripts.cpp -o ../bin/extract_transcripts
extract_transcripts.cpp: In function ‘int main(int, char**)’:
extract_transcripts.cpp:122:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
122 | for(int i=0; i < tokens2.size(); i++) {
| ~~^~~~~~~~~~~~~~~~
extract_transcripts.cpp:169:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
169 | for(int i=0; i < tokens.size(); i++) {
| ~~^~~~~~~~~~~~~~~
extract_transcripts.cpp:195:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
195 | for(int i=0; i < it->starts()->size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
extract_transcripts.cpp:203:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
203 | while(faline < stitch.size()) {
| ~~~~~~~^~~~~~~~~~~~~~~
extract_transcripts.cpp:108:7: warning: unused variable ‘line’ [-Wunused-variable]
108 | int line=0;
| ^~~~
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 hitsio.o hitstools.cpp -o ../bin/hitstools -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
hitstools.cpp: In function ‘void convert(char*, std::string)’:
hitstools.cpp:51:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
51 | for(int i = 0; i < transcriptName.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
hitstools.cpp: In function ‘int main(int, char**)’:
hitstools.cpp:96:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
96 | for(int i = 0; i < transcriptName.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
hitstools.cpp:136:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
136 | for(int i = 0; i < transcriptName.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O2 bms.o mmdiff.cpp -o ../bin/mmdiff -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
mmdiff.cpp: In function ‘void parse_mmseq(std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<double>&, int, int, double, bool)’:
mmdiff.cpp:100:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
100 | for(int i=0; i < filenames.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:111:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
111 | for(int j=0; j < tokens.size(); j++) {
| ~~^~~~~~~~~~~~~~~
mmdiff.cpp:138:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
138 | if(k + 1 > features.size()) {
| ~~~~~~^~~~~~~~~~~~~~~~~
mmdiff.cpp:147:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
147 | if(k+1 > y.n_rows) {
| ~~~~^~~~~~~~~~
mmdiff.cpp:152:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
152 | if(!useprops && tokens[lmg_ind]=="NA" || useprops && tokens[mp_ind]=="NA") {
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:173:62: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
173 | if(range_start >=0 && range_end > range_start && range_end < y.n_rows) {
| ~~~~~~~~~~^~~~~~~~~~
mmdiff.cpp:94:46: warning: variable ‘mcse_ind’ set but not used [-Wunused-but-set-variable]
94 | int feature_ind=-1, lmg_ind=-1, sd_ind=-1, mcse_ind=-1, iact_ind=-1, mp_ind=-1, sp_ind=-1, uh_ind=-1;
| ^~~~~~~~
mmdiff.cpp:94:59: warning: variable ‘iact_ind’ set but not used [-Wunused-but-set-variable]
94 | int feature_ind=-1, lmg_ind=-1, sd_ind=-1, mcse_ind=-1, iact_ind=-1, mp_ind=-1, sp_ind=-1, uh_ind=-1;
| ^~~~~~~~
mmdiff.cpp: In function ‘void apply_normalisation(std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >, arma::Mat<double>&, arma::Mat<double>&, double)’:
mmdiff.cpp:212:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
212 | for(int i=0; i < uh.n_rows; i++) {
| ~~^~~~~~~~~~~
mmdiff.cpp:214:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
214 | for(int j=0; j < uh.n_cols; j++) {
| ~~^~~~~~~~~~~
mmdiff.cpp:230:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
230 | for(int i=0; i < use.size(); i++) {
| ~~^~~~~~~~~~~~
mmdiff.cpp:232:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
232 | for(int j=0; j < y.n_cols; j++) {
| ~~^~~~~~~~~~
mmdiff.cpp:239:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
239 | for(int sample=0; sample < y.n_cols; sample++) {
| ~~~~~~~^~~~~~~~~~
mmdiff.cpp:241:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
241 | for(int i=0; i < use.size(); i++) {
| ~~^~~~~~~~~~~~
mmdiff.cpp:246:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
246 | for(int i=0; i < y.n_rows; i++) {
| ~~^~~~~~~~~~
mmdiff.cpp: In function ‘void apply_permutation(arma::Mat<double>&, arma::Mat<double>&)’:
mmdiff.cpp:257:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
257 | for(int j=0; j< y.n_cols; j++) randinds.push_back(j);
| ~^~~~~~~~~~
mmdiff.cpp:258:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
258 | for(int i=0; i < y.n_rows; i++) {
| ~~^~~~~~~~~~
mmdiff.cpp:260:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
260 | for(int j=0; j < y.n_cols; j++) {
| ~~^~~~~~~~~~
mmdiff.cpp: In function ‘void parse_matrices(std::string, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<int>&, int)’:
mmdiff.cpp:310:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
310 | for(int t=0; t < tokens.size(); t++) {
| ~~^~~~~~~~~~~~~~~
mmdiff.cpp: In function ‘int main(int, char**)’:
mmdiff.cpp:420:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
420 | for(int i=0; i < arguments.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:431:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
431 | for(int i=0; i < arguments.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:439:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
439 | while(ss < arguments.size()) {
| ~~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:451:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
451 | if(ss != arguments.size()) {
| ~~~^~~~~~~~~~~~~~~~~~~
mmdiff.cpp:578:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
578 | for(int i=0; i < arguments.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:640:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
640 | for(int i=0; i < simple_de.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:759:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
759 | if(inburnin && iter == OUTLEN/10 || !inburnin && iter==tuneiters) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:764:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
764 | for(int feature=0; feature < features.size(); feature++) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~
mmdiff.cpp:837:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
837 | if(inburnin && iter % subsample_burnin ==0 || !inburnin && iter >= tuneiters && (iter - tuneiters) % subsample_iter == 0) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:886:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
886 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
mmdiff.cpp:898:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
898 | for(int f=0; f < samplenames.size(); f++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:902:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const std::__cxx11::basic_string<char>::size_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
902 | found2 = found2==string::npos ? -1 : found2;
| ~~~~~~^~~~~~~~~~~~~~
mmdiff.cpp:907:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
907 | for(int f=0; f < samplenames.size(); f++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:909:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
909 | if(f < samplenames.size()-1) cout << "\t";
| ~~^~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:914:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
914 | for(int feature=0; feature < features.size(); feature++) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~
mmdiff.cpp:926:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare]
926 | for(int l=0; l < M.n_cols; l++) {
| ~~^~~~~~~~~~
mmdiff.cpp:936:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
936 | for(int f=0; f < samplenames.size(); f++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:939:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
939 | for(int f=0; f < samplenames.size(); f++) {
| ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:941:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
941 | if(f < samplenames.size()-1) cout << "\t";
| ~~^~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:951:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
951 | for(int feature=0; feature < features.size(); feature++) {
| ~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/bin/ld: /tmp/ccrbqDsd.ltrans1.ltrans.o: in function `main':
/builddir/build/BUILD/mmseq-1.0.11/src/bam2hits.cpp:653:(.text.startup+0x2a70): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.uLagy0
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le
++ dirname /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd mmseq-1.0.11
+ rm -rf /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le
+ mkdir -p /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/bam2hits /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/extract_transcripts /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/hitstools /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/mmcollapse /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/mmdiff /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/mmseq /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/offsetGTF /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/t2g_hits /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/fastagrep.sh bin/mouse_strain_transcriptome.sh bin/usage.sh /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
find-debuginfo: starting
+ install -p -m 0755 bin/filterGTF.rb bin/haploref.rb bin/testregexp.rb /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ install -p -m 0755 bin/ensembl_gtf_to_gff.pl /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/bin
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.0.11-16.fc40 --unique-debug-suffix -1.0.11-16.fc40.ppc64le --unique-debug-src-base mmseq-1.0.11-16.fc40.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/mmseq-1.0.11
Extracting debug info from 8 files
DWARF-compressing 8 files
sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/mmseq-1.0.11-16.fc40.ppc64le
542 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/bin/ensembl_gtf_to_gff.pl from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/testregexp.rb from /usr/bin/env ruby to #!/usr/bin/ruby
mangling shebang in /usr/bin/haploref.rb from /usr/bin/env ruby to #!/usr/bin/ruby
mangling shebang in /usr/bin/filterGTF.rb from /usr/bin/env ruby to #!/usr/bin/ruby
mangling shebang in /usr/bin/usage.sh from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/bin/mouse_strain_transcriptome.sh from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/bin/fastagrep.sh from /bin/bash to #!/usr/bin/bash
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.Qx14C2
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd mmseq-1.0.11
++ bin/mmseq --version
++ true
+ test mmseq-1.0.11 = mmseq-1.0.11
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: mmseq-1.0.11-16.fc40.ppc64le
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.m8gDLp
+ umask 022
+ cd /builddir/build/BUILD
+ cd mmseq-1.0.11
+ DOCDIR=/builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/share/doc/mmseq
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/share/doc/mmseq
+ cp -pr /builddir/build/BUILD/mmseq-1.0.11/README.md /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/share/doc/mmseq
+ cp -pr /builddir/build/BUILD/mmseq-1.0.11/COPYING /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/share/doc/mmseq
+ cp -pr /builddir/build/BUILD/mmseq-1.0.11/doc /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le/usr/share/doc/mmseq
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: mmseq = 1.0.11-16.fc40 mmseq(ppc-64) = 1.0.11-16.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/perl /usr/bin/ruby /usr/bin/sh libboost_iostreams.so.1.81.0()(64bit) libboost_regex.so.1.81.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libhts.so.3()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) perl(strict) rtld(GNU_HASH)
Processing files: mmseq-debugsource-1.0.11-16.fc40.ppc64le
Provides: mmseq-debugsource = 1.0.11-16.fc40 mmseq-debugsource(ppc-64) = 1.0.11-16.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: mmseq-debuginfo-1.0.11-16.fc40.ppc64le
Provides: debuginfo(build-id) = 16493c2cc8e773df97cb791d4a3d1342d6333a8d debuginfo(build-id) = 19465e025d960e8e58c30d6b2889de873962367b debuginfo(build-id) = 2d304290b31a34299f8f74ba05514e496e8fec58 debuginfo(build-id) = 318d976e0781e24ec91e814754bf8c6bd22beea2 debuginfo(build-id) = 464ccb5eb2b671e69b3e3f3e00b693b1e6215a11 debuginfo(build-id) = 968364cadb22f15f4b1f7e7bb351021bcd7a49a8 debuginfo(build-id) = d2e40be386a7bb915ab682bdbb35ab10ffb5ed5c debuginfo(build-id) = fdeae3ef832fdd5012efc4fc64274afd3773acbe mmseq-debuginfo = 1.0.11-16.fc40 mmseq-debuginfo(ppc-64) = 1.0.11-16.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: mmseq-debugsource(ppc-64) = 1.0.11-16.fc40
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le
Wrote: /builddir/build/RPMS/mmseq-1.0.11-16.fc40.ppc64le.rpm
Wrote: /builddir/build/RPMS/mmseq-debugsource-1.0.11-16.fc40.ppc64le.rpm
Wrote: /builddir/build/RPMS/mmseq-debuginfo-1.0.11-16.fc40.ppc64le.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.q2NGzZ
+ umask 022
+ cd /builddir/build/BUILD
+ cd mmseq-1.0.11
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/mmseq-1.0.11-16.fc40.ppc64le
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.xHPKDE
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/mmseq-1.0.11-SPECPARTS
+ rm -rf mmseq-1.0.11 mmseq-1.0.11.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
RPM build warnings:
%patchN is deprecated (1 usages found), use %patch N (or %patch -P N)
Finish: rpmbuild mmseq-1.0.11-16.fc40.src.rpm
Finish: build phase for mmseq-1.0.11-16.fc40.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1695067711.503818/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/mmseq-1.0.11-16.fc40.src.rpm) Config(child) 7 minutes 45 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
"packages": [
{
"name": "mmseq",
"epoch": null,
"version": "1.0.11",
"release": "16.fc40",
"arch": "src"
},
{
"name": "mmseq-debuginfo",
"epoch": null,
"version": "1.0.11",
"release": "16.fc40",
"arch": "ppc64le"
},
{
"name": "mmseq",
"epoch": null,
"version": "1.0.11",
"release": "16.fc40",
"arch": "ppc64le"
},
{
"name": "mmseq-debugsource",
"epoch": null,
"version": "1.0.11",
"release": "16.fc40",
"arch": "ppc64le"
}
]
}
RPMResults finished