Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c28f' (ED25519) to the list of known hosts.
You can reproduce this build on your computer by running:
sudo dnf install copr-rpmbuild
/usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6408290-fedora-rawhide-ppc64le --chroot fedora-rawhide-ppc64le
Version: 0.69
PID: 6157
Logging PID: 6158
Task:
{'appstream': False,
'background': True,
'build_id': 6408290,
'buildroot_pkgs': [],
'chroot': 'fedora-rawhide-ppc64le',
'enable_net': False,
'fedora_review': False,
'git_hash': 'b43ac973914abe9602e626ce93aee30180d953cc',
'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/R-Rhtslib',
'isolation': 'default',
'memory_reqs': 2048,
'package_name': 'R-Rhtslib',
'package_version': '1.28.0-4%{dist}',
'project_dirname': 'zlib-ng-compat-mpb',
'project_name': 'zlib-ng-compat-mpb',
'project_owner': 'tuliom',
'repo_priority': None,
'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/tuliom/zlib-ng-compat-mpb/fedora-rawhide-ppc64le/',
'id': 'copr_base',
'name': 'Copr repository',
'priority': None}],
'sandbox': 'tuliom/zlib-ng-compat-mpb--tuliom',
'source_json': {},
'source_type': None,
'submitter': 'tuliom',
'tags': [],
'task_id': '6408290-fedora-rawhide-ppc64le',
'timeout': 115200,
'uses_devel_repo': False,
'with_opts': [],
'without_opts': []}
Running: git clone https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/R-Rhtslib /var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib --depth 500 --no-single-branch --recursive
cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/R-Rhtslib', '/var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout:
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib'...
Running: git checkout b43ac973914abe9602e626ce93aee30180d953cc --
cmd: ['git', 'checkout', 'b43ac973914abe9602e626ce93aee30180d953cc', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib
rc: 0
stdout:
stderr: Note: switching to 'b43ac973914abe9602e626ce93aee30180d953cc'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at b43ac97 automatic import of R-Rhtslib
Running: copr-distgit-client sources
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib
rc: 0
stdout:
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading Rhtslib_1.28.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o Rhtslib_1.28.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/tuliom/zlib-ng-compat-mpb/R-Rhtslib/Rhtslib_1.28.0.tar.gz/md5/68bbb8477444f2c8e7bbf7720ece120f/Rhtslib_1.28.0.tar.gz
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 1436k 100 1436k 0 0 8702k 0 --:--:-- --:--:-- --:--:-- 8756k
INFO: Reading stdout from command: md5sum Rhtslib_1.28.0.tar.gz
Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib/R-Rhtslib.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1695197195.027392 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.1.1 starting (python version = 3.11.3, NVR = mock-5.1.1-1.fc38)...
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib/R-Rhtslib.spec) Config(fedora-rawhide-ppc64le)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.1.1
INFO: Mock Version: 5.1.1
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695197195.027392/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695197195.027392/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/8fc907b61f730f74fe0ae4029c122d2791a5cd6f26445f9c3ffec89fc52a2a32/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/8fc907b61f730f74fe0ae4029c122d2791a5cd6f26445f9c3ffec89fc52a2a32/merged) with podman image umount
INFO: Package manager dnf detected and used (fallback)
INFO: Bootstrap image not marked ready
Start(bootstrap): installing dnf tooling
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 32 MB/s | 6.8 MB 00:00
fedora 21 MB/s | 67 MB 00:03
Last metadata expiration check: 0:00:02 ago on Wed Sep 20 08:06:51 2023.
Package python3-dnf-4.16.2-4.fc40.noarch is already installed.
Dependencies resolved.
================================================================================
Package Arch Version Repository Size
================================================================================
Installing:
python3-dnf-plugins-core noarch 4.4.2-1.fc39 fedora 293 k
Installing dependencies:
dbus-libs ppc64le 1:1.14.10-1.fc40 fedora 177 k
python3-dateutil noarch 1:2.8.2-10.fc39 fedora 355 k
python3-dbus ppc64le 1.3.2-4.fc39 fedora 161 k
python3-distro noarch 1.8.0-6.fc39 fedora 49 k
python3-six noarch 1.16.0-12.fc39 fedora 41 k
python3-systemd ppc64le 235-5.fc39 fedora 108 k
Transaction Summary
================================================================================
Install 7 Packages
Total download size: 1.2 M
Installed size: 4.8 M
Downloading Packages:
(1/7): python3-dbus-1.3.2-4.fc39.ppc64le.rpm 715 kB/s | 161 kB 00:00
(2/7): python3-distro-1.8.0-6.fc39.noarch.rpm 1.1 MB/s | 49 kB 00:00
(3/7): dbus-libs-1.14.10-1.fc40.ppc64le.rpm 589 kB/s | 177 kB 00:00
(4/7): python3-dnf-plugins-core-4.4.2-1.fc39.no 1.8 MB/s | 293 kB 00:00
(5/7): python3-six-1.16.0-12.fc39.noarch.rpm 258 kB/s | 41 kB 00:00
(6/7): python3-systemd-235-5.fc39.ppc64le.rpm 1.9 MB/s | 108 kB 00:00
(7/7): python3-dateutil-2.8.2-10.fc39.noarch.rp 607 kB/s | 355 kB 00:00
--------------------------------------------------------------------------------
Total 1.8 MB/s | 1.2 MB 00:00
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Preparing : 1/1
Installing : python3-systemd-235-5.fc39.ppc64le 1/7
Installing : python3-six-1.16.0-12.fc39.noarch 2/7
Installing : python3-dateutil-1:2.8.2-10.fc39.noarch 3/7
Installing : python3-distro-1.8.0-6.fc39.noarch 4/7
Installing : dbus-libs-1:1.14.10-1.fc40.ppc64le 5/7
Installing : python3-dbus-1.3.2-4.fc39.ppc64le 6/7
Installing : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7
Running scriptlet: python3-dnf-plugins-core-4.4.2-1.fc39.noarch 7/7
Verifying : dbus-libs-1:1.14.10-1.fc40.ppc64le 1/7
Verifying : python3-dateutil-1:2.8.2-10.fc39.noarch 2/7
Verifying : python3-dbus-1.3.2-4.fc39.ppc64le 3/7
Verifying : python3-distro-1.8.0-6.fc39.noarch 4/7
Verifying : python3-dnf-plugins-core-4.4.2-1.fc39.noarch 5/7
Verifying : python3-six-1.16.0-12.fc39.noarch 6/7
Verifying : python3-systemd-235-5.fc39.ppc64le 7/7
Installed:
dbus-libs-1:1.14.10-1.fc40.ppc64le
python3-dateutil-1:2.8.2-10.fc39.noarch
python3-dbus-1.3.2-4.fc39.ppc64le
python3-distro-1.8.0-6.fc39.noarch
python3-dnf-plugins-core-4.4.2-1.fc39.noarch
python3-six-1.16.0-12.fc39.noarch
python3-systemd-235-5.fc39.ppc64le
Complete!
Finish(bootstrap): installing dnf tooling
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf detected and used (direct choice)
Start: installing minimal buildroot with dnf
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 26 MB/s | 6.8 MB 00:00
fedora 16 MB/s | 67 MB 00:04
Last metadata expiration check: 0:00:02 ago on Wed Sep 20 08:07:31 2023.
Dependencies resolved.
================================================================================
Package Arch Version Repo Size
================================================================================
Installing group/module packages:
bash ppc64le 5.2.15-5.fc39 fedora 1.9 M
bzip2 ppc64le 1.0.8-16.fc39 fedora 53 k
coreutils ppc64le 9.4-1.fc40 fedora 1.4 M
cpio ppc64le 2.14-4.fc39 fedora 286 k
diffutils ppc64le 3.10-3.fc39 fedora 408 k
fedora-release-common noarch 40-0.7 fedora 18 k
findutils ppc64le 1:4.9.0-6.fc40 fedora 540 k
gawk ppc64le 5.2.2-2.fc39 fedora 1.1 M
glibc-minimal-langpack ppc64le 2.38.9000-9.fc40 fedora 74 k
grep ppc64le 3.11-5.fc40 fedora 308 k
gzip ppc64le 1.12-6.fc39 fedora 170 k
info ppc64le 7.0.3-3.fc39 fedora 200 k
patch ppc64le 2.7.6-22.fc39 fedora 137 k
redhat-rpm-config noarch 270-1.fc40 copr_base 74 k
rpm-build ppc64le 4.18.99-1.fc40 copr_base 73 k
sed ppc64le 4.8-14.fc39 fedora 312 k
shadow-utils ppc64le 2:4.14.0-1.fc40 fedora 1.3 M
tar ppc64le 2:1.35-2.fc40 fedora 884 k
unzip ppc64le 6.0-62.fc39 fedora 190 k
util-linux ppc64le 2.39.2-1.fc40 copr_base 1.2 M
which ppc64le 2.21-40.fc39 fedora 43 k
xz ppc64le 5.4.4-1.fc39 fedora 559 k
Installing dependencies:
alternatives ppc64le 1.25-1.fc39 fedora 41 k
ansible-srpm-macros noarch 1-11.fc39 fedora 21 k
audit-libs ppc64le 3.1.2-4.fc40 fedora 132 k
authselect ppc64le 1.4.2-3.fc39 fedora 145 k
authselect-libs ppc64le 1.4.2-3.fc39 fedora 253 k
basesystem noarch 11-18.fc39 fedora 7.2 k
binutils ppc64le 2.41-5.fc40 fedora 6.4 M
binutils-gold ppc64le 2.41-5.fc40 fedora 1.1 M
bzip2-libs ppc64le 1.0.8-16.fc39 fedora 47 k
ca-certificates noarch 2023.2.60_v7.0.306-3.fc40 fedora 837 k
coreutils-common ppc64le 9.4-1.fc40 fedora 2.1 M
cracklib ppc64le 2.9.11-2.fc40 copr_base 86 k
crypto-policies noarch 20230731-1.git5ed06e0.fc39 fedora 99 k
curl ppc64le 8.3.0-1.fc40 copr_base 357 k
cyrus-sasl-lib ppc64le 2.1.28-11.fc40 copr_base 878 k
debugedit ppc64le 5.0-10.fc39 fedora 80 k
dwz ppc64le 0.15-3.fc39 fedora 147 k
ed ppc64le 1.19-4.fc39 fedora 81 k
efi-srpm-macros noarch 5-9.fc39 fedora 22 k
elfutils ppc64le 0.189-6.fc40 copr_base 563 k
elfutils-debuginfod-client ppc64le 0.189-6.fc40 copr_base 40 k
elfutils-default-yama-scope noarch 0.189-6.fc40 copr_base 14 k
elfutils-libelf ppc64le 0.189-6.fc40 copr_base 204 k
elfutils-libs ppc64le 0.189-6.fc40 copr_base 294 k
fedora-gpg-keys noarch 40-0.1 fedora 130 k
fedora-release noarch 40-0.7 fedora 8.0 k
fedora-release-identity-basic
noarch 40-0.7 fedora 8.8 k
fedora-repos noarch 40-0.1 fedora 9.4 k
fedora-repos-rawhide noarch 40-0.1 fedora 9.0 k
file ppc64le 5.45-1.fc40 copr_base 50 k
file-libs ppc64le 5.45-1.fc40 copr_base 775 k
filesystem ppc64le 3.18-6.fc39 fedora 1.1 M
fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k
forge-srpm-macros noarch 0.1.0-1.fc40 fedora 18 k
fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k
gdb-minimal ppc64le 13.2-9.fc40 fedora 4.2 M
gdbm-libs ppc64le 1:1.23-4.fc39 fedora 62 k
ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k
glibc ppc64le 2.38.9000-9.fc40 fedora 2.2 M
glibc-common ppc64le 2.38.9000-9.fc40 fedora 370 k
glibc-gconv-extra ppc64le 2.38.9000-9.fc40 fedora 2.0 M
gmp ppc64le 1:6.2.1-5.fc39 fedora 304 k
gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k
go-srpm-macros noarch 3.2.0-7.fc40 fedora 27 k
jansson ppc64le 2.13.1-7.fc39 fedora 49 k
kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k
keyutils-libs ppc64le 1.6.1-7.fc39 fedora 32 k
krb5-libs ppc64le 1.21.2-1.fc40 fedora 850 k
libacl ppc64le 2.3.1-9.fc40 fedora 26 k
libarchive ppc64le 3.7.2-1.fc40 copr_base 477 k
libattr ppc64le 2.5.1-9.fc40 fedora 19 k
libblkid ppc64le 2.39.2-1.fc40 copr_base 134 k
libbrotli ppc64le 1.1.0-1.fc40 fedora 380 k
libcap ppc64le 2.48-7.fc39 fedora 73 k
libcap-ng ppc64le 0.8.3-8.fc40 fedora 33 k
libcom_err ppc64le 1.47.0-2.fc39 fedora 27 k
libcurl ppc64le 8.3.0-1.fc40 copr_base 380 k
libdb ppc64le 5.3.28-58.fc40 copr_base 831 k
libeconf ppc64le 0.5.2-1.fc40 fedora 34 k
libevent ppc64le 2.1.12-9.fc39 fedora 275 k
libfdisk ppc64le 2.39.2-1.fc40 copr_base 179 k
libffi ppc64le 3.4.4-4.fc39 fedora 38 k
libgcc ppc64le 13.2.1-1.fc40 copr_base 104 k
libgomp ppc64le 13.2.1-1.fc40 copr_base 332 k
libidn2 ppc64le 2.3.4-3.fc39 fedora 121 k
libmount ppc64le 2.39.2-1.fc40 copr_base 177 k
libnghttp2 ppc64le 1.56.0-1.fc40 copr_base 85 k
libnsl2 ppc64le 2.0.0-6.fc39 fedora 32 k
libpkgconf ppc64le 1.9.5-2.fc39 fedora 42 k
libpsl ppc64le 0.21.2-4.fc39 fedora 65 k
libpwquality ppc64le 1.4.5-6.fc39 fedora 123 k
librtas ppc64le 2.0.4-3.fc39 fedora 70 k
libselinux ppc64le 3.5-5.fc39 fedora 100 k
libsemanage ppc64le 3.5-4.fc39 fedora 131 k
libsepol ppc64le 3.5-2.fc39 fedora 356 k
libsigsegv ppc64le 2.14-5.fc39 fedora 28 k
libsmartcols ppc64le 2.39.2-1.fc40 copr_base 74 k
libssh ppc64le 0.10.5-2.fc40 copr_base 239 k
libssh-config noarch 0.10.5-2.fc40 copr_base 9.6 k
libstdc++ ppc64le 13.2.1-1.fc40 copr_base 995 k
libtasn1 ppc64le 4.19.0-3.fc39 fedora 80 k
libtirpc ppc64le 1.3.3-1.rc2.fc39 fedora 108 k
libunistring ppc64le 1.1-5.fc40 fedora 578 k
libutempter ppc64le 1.2.1-10.fc39 fedora 27 k
libuuid ppc64le 2.39.2-1.fc40 copr_base 30 k
libverto ppc64le 0.3.2-6.fc39 fedora 22 k
libxcrypt ppc64le 4.4.36-2.fc39 fedora 132 k
libxml2 ppc64le 2.11.5-1.fc40 copr_base 778 k
libzstd ppc64le 1.5.5-4.fc40 copr_base 336 k
lua-libs ppc64le 5.4.6-3.fc39 fedora 149 k
lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k
lz4-libs ppc64le 1.9.4-4.fc39 fedora 85 k
mpfr ppc64le 4.2.0-3.fc39 fedora 353 k
ncurses-base noarch 6.4-7.20230520.fc40 fedora 88 k
ncurses-libs ppc64le 6.4-7.20230520.fc40 fedora 380 k
ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k
openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k
openldap ppc64le 2.6.6-1.fc39 fedora 287 k
openssl-libs ppc64le 1:3.1.1-4.fc40 copr_base 2.3 M
p11-kit ppc64le 0.25.0-2.fc39 fedora 500 k
p11-kit-trust ppc64le 0.25.0-2.fc39 fedora 156 k
package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k
pam ppc64le 1.5.3-2.fc39 fedora 592 k
pam-libs ppc64le 1.5.3-2.fc39 fedora 64 k
pcre2 ppc64le 10.42-1.fc39.2 fedora 241 k
pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k
perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k
pkgconf ppc64le 1.9.5-2.fc39 fedora 43 k
pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k
pkgconf-pkg-config ppc64le 1.9.5-2.fc39 fedora 9.6 k
popt ppc64le 1.19-3.fc39 fedora 71 k
publicsuffix-list-dafsa noarch 20230812-1.fc40 fedora 57 k
pyproject-srpm-macros noarch 1.9.0-2.fc39 fedora 14 k
python-srpm-macros noarch 3.12-4.fc40 fedora 25 k
qt5-srpm-macros noarch 5.15.10-2.fc39 fedora 8.3 k
qt6-srpm-macros noarch 6.5.2-2.fc39 fedora 9.2 k
readline ppc64le 8.2-4.fc39 fedora 229 k
rpm ppc64le 4.18.99-1.fc40 copr_base 509 k
rpm-build-libs ppc64le 4.18.99-1.fc40 copr_base 104 k
rpm-libs ppc64le 4.18.99-1.fc40 copr_base 357 k
rpm-sequoia ppc64le 1.5.0-1.fc40 fedora 1.7 M
rust-srpm-macros noarch 24-5.fc40 fedora 12 k
setup noarch 2.14.4-1.fc39 fedora 154 k
sqlite-libs ppc64le 3.43.1-1.fc40 fedora 798 k
systemd-libs ppc64le 254.2-7.fc40 fedora 734 k
tzdata noarch 2023c-3.fc40 fedora 718 k
util-linux-core ppc64le 2.39.2-1.fc40 copr_base 520 k
xxhash-libs ppc64le 0.8.2-1.fc39 fedora 37 k
xz-libs ppc64le 5.4.4-1.fc39 fedora 121 k
zip ppc64le 3.0-39.fc40 fedora 274 k
zlib-ng-compat ppc64le 2.1.3-4.fc40 copr_base 80 k
zstd ppc64le 1.5.5-4.fc40 copr_base 500 k
Installing Groups:
Buildsystem building group
Transaction Summary
================================================================================
Install 154 Packages
Total download size: 57 M
Installed size: 327 M
Downloading Packages:
(1/154): cracklib-2.9.11-2.fc40.ppc64le.rpm 1.5 MB/s | 86 kB 00:00
(2/154): elfutils-0.189-6.fc40.ppc64le.rpm 8.2 MB/s | 563 kB 00:00
(3/154): cyrus-sasl-lib-2.1.28-11.fc40.ppc64le. 6.8 MB/s | 878 kB 00:00
(4/154): curl-8.3.0-1.fc40.ppc64le.rpm 2.7 MB/s | 357 kB 00:00
(5/154): elfutils-debuginfod-client-0.189-6.fc4 3.5 MB/s | 40 kB 00:00
(6/154): elfutils-default-yama-scope-0.189-6.fc 1.6 MB/s | 14 kB 00:00
(7/154): elfutils-libelf-0.189-6.fc40.ppc64le.r 15 MB/s | 204 kB 00:00
(8/154): elfutils-libs-0.189-6.fc40.ppc64le.rpm 19 MB/s | 294 kB 00:00
(9/154): file-5.45-1.fc40.ppc64le.rpm 3.2 MB/s | 50 kB 00:00
(10/154): file-libs-5.45-1.fc40.ppc64le.rpm 40 MB/s | 775 kB 00:00
(11/154): libarchive-3.7.2-1.fc40.ppc64le.rpm 30 MB/s | 477 kB 00:00
(12/154): libblkid-2.39.2-1.fc40.ppc64le.rpm 8.3 MB/s | 134 kB 00:00
(13/154): libcurl-8.3.0-1.fc40.ppc64le.rpm 28 MB/s | 380 kB 00:00
(14/154): libdb-5.3.28-58.fc40.ppc64le.rpm 40 MB/s | 831 kB 00:00
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(37/154): ansible-srpm-macros-1-11.fc39.noarch. 84 kB/s | 21 kB 00:00
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(42/154): authselect-libs-1.4.2-3.fc39.ppc64le. 2.1 MB/s | 253 kB 00:00
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(44/154): binutils-gold-2.41-5.fc40.ppc64le.rpm 8.5 MB/s | 1.1 MB 00:00
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(48/154): ca-certificates-2023.2.60_v7.0.306-3. 17 MB/s | 837 kB 00:00
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(51/154): coreutils-common-9.4-1.fc40.ppc64le.r 27 MB/s | 2.1 MB 00:00
(52/154): crypto-policies-20230731-1.git5ed06e0 2.6 MB/s | 99 kB 00:00
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(57/154): efi-srpm-macros-5-9.fc39.noarch.rpm 508 kB/s | 22 kB 00:00
(58/154): fedora-release-40-0.7.noarch.rpm 358 kB/s | 8.0 kB 00:00
(59/154): fedora-gpg-keys-40-0.1.noarch.rpm 3.0 MB/s | 130 kB 00:00
(60/154): fedora-release-common-40-0.7.noarch.r 811 kB/s | 18 kB 00:00
(61/154): fedora-release-identity-basic-40-0.7. 246 kB/s | 8.8 kB 00:00
(62/154): fedora-repos-40-0.1.noarch.rpm 227 kB/s | 9.4 kB 00:00
(63/154): fedora-repos-rawhide-40-0.1.noarch.rp 230 kB/s | 9.0 kB 00:00
(64/154): filesystem-3.18-6.fc39.ppc64le.rpm 27 MB/s | 1.1 MB 00:00
(65/154): fonts-srpm-macros-2.0.5-12.fc39.noarc 812 kB/s | 26 kB 00:00
(66/154): findutils-4.9.0-6.fc40.ppc64le.rpm 8.4 MB/s | 540 kB 00:00
(67/154): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 269 kB/s | 7.4 kB 00:00
(68/154): gawk-5.2.2-2.fc39.ppc64le.rpm 28 MB/s | 1.1 MB 00:00
(69/154): forge-srpm-macros-0.1.0-1.fc40.noarch 209 kB/s | 18 kB 00:00
(70/154): ghc-srpm-macros-1.6.1-2.fc39.noarch.r 248 kB/s | 7.8 kB 00:00
(71/154): gdbm-libs-1.23-4.fc39.ppc64le.rpm 1.4 MB/s | 62 kB 00:00
(72/154): gdb-minimal-13.2-9.fc40.ppc64le.rpm 33 MB/s | 4.2 MB 00:00
(73/154): glibc-common-2.38.9000-9.fc40.ppc64le 7.8 MB/s | 370 kB 00:00
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(75/154): gmp-6.2.1-5.fc39.ppc64le.rpm 7.8 MB/s | 304 kB 00:00
(76/154): glibc-minimal-langpack-2.38.9000-9.fc 1.0 MB/s | 74 kB 00:00
(77/154): glibc-gconv-extra-2.38.9000-9.fc40.pp 22 MB/s | 2.0 MB 00:00
(78/154): gnat-srpm-macros-6-3.fc39.noarch.rpm 253 kB/s | 8.8 kB 00:00
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(82/154): info-7.0.3-3.fc39.ppc64le.rpm 2.4 MB/s | 200 kB 00:00
(83/154): jansson-2.13.1-7.fc39.ppc64le.rpm 777 kB/s | 49 kB 00:00
(84/154): kernel-srpm-macros-1.0-20.fc39.noarch 265 kB/s | 10 kB 00:00
(85/154): keyutils-libs-1.6.1-7.fc39.ppc64le.rp 715 kB/s | 32 kB 00:00
(86/154): krb5-libs-1.21.2-1.fc40.ppc64le.rpm 16 MB/s | 850 kB 00:00
(87/154): libacl-2.3.1-9.fc40.ppc64le.rpm 389 kB/s | 26 kB 00:00
(88/154): libattr-2.5.1-9.fc40.ppc64le.rpm 432 kB/s | 19 kB 00:00
(89/154): libbrotli-1.1.0-1.fc40.ppc64le.rpm 7.3 MB/s | 380 kB 00:00
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(91/154): libcap-ng-0.8.3-8.fc40.ppc64le.rpm 757 kB/s | 33 kB 00:00
(92/154): libcom_err-1.47.0-2.fc39.ppc64le.rpm 798 kB/s | 27 kB 00:00
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(100/154): librtas-2.0.4-3.fc39.ppc64le.rpm 2.9 MB/s | 70 kB 00:00
(101/154): libpwquality-1.4.5-6.fc39.ppc64le.rp 1.8 MB/s | 123 kB 00:00
(102/154): libselinux-3.5-5.fc39.ppc64le.rpm 2.3 MB/s | 100 kB 00:00
(103/154): libsemanage-3.5-4.fc39.ppc64le.rpm 3.3 MB/s | 131 kB 00:00
(104/154): libsigsegv-2.14-5.fc39.ppc64le.rpm 688 kB/s | 28 kB 00:00
(105/154): libsepol-3.5-2.fc39.ppc64le.rpm 6.9 MB/s | 356 kB 00:00
(106/154): libtasn1-4.19.0-3.fc39.ppc64le.rpm 1.8 MB/s | 80 kB 00:00
(107/154): libunistring-1.1-5.fc40.ppc64le.rpm 18 MB/s | 578 kB 00:00
(108/154): libtirpc-1.3.3-1.rc2.fc39.ppc64le.rp 2.6 MB/s | 108 kB 00:00
(109/154): libutempter-1.2.1-10.fc39.ppc64le.rp 782 kB/s | 27 kB 00:00
(110/154): libxcrypt-4.4.36-2.fc39.ppc64le.rpm 3.3 MB/s | 132 kB 00:00
(111/154): libverto-0.3.2-6.fc39.ppc64le.rpm 537 kB/s | 22 kB 00:00
(112/154): lua-libs-5.4.6-3.fc39.ppc64le.rpm 4.0 MB/s | 149 kB 00:00
(113/154): lua-srpm-macros-1-9.fc39.noarch.rpm 380 kB/s | 8.6 kB 00:00
(114/154): mpfr-4.2.0-3.fc39.ppc64le.rpm 6.5 MB/s | 353 kB 00:00
(115/154): ncurses-libs-6.4-7.20230520.fc40.ppc 4.8 MB/s | 380 kB 00:00
(116/154): ocaml-srpm-macros-8-2.fc39.noarch.rp 327 kB/s | 14 kB 00:00
(117/154): ncurses-base-6.4-7.20230520.fc40.noa 501 kB/s | 88 kB 00:00
(118/154): openblas-srpm-macros-2-14.fc39.noarc 340 kB/s | 7.5 kB 00:00
(119/154): p11-kit-0.25.0-2.fc39.ppc64le.rpm 4.2 MB/s | 500 kB 00:00
(120/154): p11-kit-trust-0.25.0-2.fc39.ppc64le. 2.8 MB/s | 156 kB 00:00
(121/154): package-notes-srpm-macros-0.5-9.fc39 282 kB/s | 11 kB 00:00
(122/154): lz4-libs-1.9.4-4.fc39.ppc64le.rpm 199 kB/s | 85 kB 00:00
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(124/154): pam-1.5.3-2.fc39.ppc64le.rpm 3.7 MB/s | 592 kB 00:00
(125/154): pcre2-10.42-1.fc39.2.ppc64le.rpm 5.1 MB/s | 241 kB 00:00
(126/154): pam-libs-1.5.3-2.fc39.ppc64le.rpm 281 kB/s | 64 kB 00:00
(127/154): pcre2-syntax-10.42-1.fc39.2.noarch.r 3.1 MB/s | 143 kB 00:00
(128/154): patch-2.7.6-22.fc39.ppc64le.rpm 1.1 MB/s | 137 kB 00:00
(129/154): pkgconf-1.9.5-2.fc39.ppc64le.rpm 942 kB/s | 43 kB 00:00
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(131/154): pkgconf-pkg-config-1.9.5-2.fc39.ppc6 421 kB/s | 9.6 kB 00:00
(132/154): pkgconf-m4-1.9.5-2.fc39.noarch.rpm 172 kB/s | 14 kB 00:00
(133/154): publicsuffix-list-dafsa-20230812-1.f 1.0 MB/s | 57 kB 00:00
(134/154): pyproject-srpm-macros-1.9.0-2.fc39.n 336 kB/s | 14 kB 00:00
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(140/154): rust-srpm-macros-24-5.fc40.noarch.rp 308 kB/s | 12 kB 00:00
(141/154): setup-2.14.4-1.fc39.noarch.rpm 2.8 MB/s | 154 kB 00:00
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(143/154): sqlite-libs-3.43.1-1.fc40.ppc64le.rp 6.1 MB/s | 798 kB 00:00
(144/154): systemd-libs-254.2-7.fc40.ppc64le.rp 9.3 MB/s | 734 kB 00:00
(145/154): sed-4.8-14.fc39.ppc64le.rpm 655 kB/s | 312 kB 00:00
(146/154): tar-1.35-2.fc40.ppc64le.rpm 8.4 MB/s | 884 kB 00:00
(147/154): unzip-6.0-62.fc39.ppc64le.rpm 5.7 MB/s | 190 kB 00:00
(148/154): which-2.21-40.fc39.ppc64le.rpm 887 kB/s | 43 kB 00:00
(149/154): rpm-sequoia-1.5.0-1.fc40.ppc64le.rpm 2.4 MB/s | 1.7 MB 00:00
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(154/154): tzdata-2023c-3.fc40.noarch.rpm 1.6 MB/s | 718 kB 00:00
--------------------------------------------------------------------------------
Total 15 MB/s | 57 MB 00:03
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0xA15B79CC:
Userid : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
Key imported successfully
fedora 1.6 MB/s | 1.6 kB 00:00
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed
fedora 1.6 MB/s | 1.6 kB 00:00
Importing GPG key 0x18B8E74C:
Userid : "Fedora (39) <fedora-39-primary@fedoraproject.org>"
Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C
From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
Running scriptlet: filesystem-3.18-6.fc39.ppc64le 1/1
Preparing : 1/1
Installing : libgcc-13.2.1-1.fc40.ppc64le 1/154
Running scriptlet: libgcc-13.2.1-1.fc40.ppc64le 1/154
Installing : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/154
Running scriptlet: crypto-policies-20230731-1.git5ed06e0.fc39.noarc 2/154
Installing : tzdata-2023c-3.fc40.noarch 3/154
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Installing : fedora-release-40-0.7.noarch 9/154
Installing : setup-2.14.4-1.fc39.noarch 10/154
warning: /etc/hosts created as /etc/hosts.rpmnew
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Installing : filesystem-3.18-6.fc39.ppc64le 11/154
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Installing : glibc-gconv-extra-2.38.9000-9.fc40.ppc64le 25/154
Running scriptlet: glibc-gconv-extra-2.38.9000-9.fc40.ppc64le 25/154
Installing : glibc-minimal-langpack-2.38.9000-9.fc40.ppc64le 26/154
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Running scriptlet: glibc-2.38.9000-9.fc40.ppc64le 28/154
Installing : glibc-2.38.9000-9.fc40.ppc64le 28/154
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Installing : ncurses-libs-6.4-7.20230520.fc40.ppc64le 29/154
Installing : bash-5.2.15-5.fc39.ppc64le 30/154
Running scriptlet: bash-5.2.15-5.fc39.ppc64le 30/154
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Installing : libacl-2.3.1-9.fc40.ppc64le 43/154
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Installing : libsepol-3.5-2.fc39.ppc64le 60/154
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Installing : grep-3.11-5.fc40.ppc64le 67/154
Installing : findutils-1:4.9.0-6.fc40.ppc64le 68/154
Installing : xz-5.4.4-1.fc39.ppc64le 69/154
Installing : libmount-2.39.2-1.fc40.ppc64le 70/154
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Installing : libevent-2.1.12-9.fc39.ppc64le 126/154
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Running scriptlet: rpm-4.18.99-1.fc40.ppc64le 143/154
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Installing : python-srpm-macros-3.12-4.fc40.noarch 149/154
Installing : redhat-rpm-config-270-1.fc40.noarch 150/154
Installing : rpm-build-4.18.99-1.fc40.ppc64le 151/154
Installing : util-linux-2.39.2-1.fc40.ppc64le 152/154
Installing : which-2.21-40.fc39.ppc64le 153/154
Installing : info-7.0.3-3.fc39.ppc64le 154/154
Running scriptlet: filesystem-3.18-6.fc39.ppc64le 154/154
Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 154/154
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Running scriptlet: rpm-4.18.99-1.fc40.ppc64le 154/154
Running scriptlet: info-7.0.3-3.fc39.ppc64le 154/154
Verifying : cracklib-2.9.11-2.fc40.ppc64le 1/154
Verifying : curl-8.3.0-1.fc40.ppc64le 2/154
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Verifying : elfutils-0.189-6.fc40.ppc64le 4/154
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Verifying : file-5.45-1.fc40.ppc64le 9/154
Verifying : file-libs-5.45-1.fc40.ppc64le 10/154
Verifying : libarchive-3.7.2-1.fc40.ppc64le 11/154
Verifying : libblkid-2.39.2-1.fc40.ppc64le 12/154
Verifying : libcurl-8.3.0-1.fc40.ppc64le 13/154
Verifying : libdb-5.3.28-58.fc40.ppc64le 14/154
Verifying : libfdisk-2.39.2-1.fc40.ppc64le 15/154
Verifying : libgcc-13.2.1-1.fc40.ppc64le 16/154
Verifying : libgomp-13.2.1-1.fc40.ppc64le 17/154
Verifying : libmount-2.39.2-1.fc40.ppc64le 18/154
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Verifying : redhat-rpm-config-270-1.fc40.noarch 28/154
Verifying : rpm-4.18.99-1.fc40.ppc64le 29/154
Verifying : rpm-build-4.18.99-1.fc40.ppc64le 30/154
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Verifying : util-linux-2.39.2-1.fc40.ppc64le 33/154
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Verifying : zlib-ng-compat-2.1.3-4.fc40.ppc64le 35/154
Verifying : zstd-1.5.5-4.fc40.ppc64le 36/154
Verifying : alternatives-1.25-1.fc39.ppc64le 37/154
Verifying : ansible-srpm-macros-1-11.fc39.noarch 38/154
Verifying : audit-libs-3.1.2-4.fc40.ppc64le 39/154
Verifying : authselect-1.4.2-3.fc39.ppc64le 40/154
Verifying : authselect-libs-1.4.2-3.fc39.ppc64le 41/154
Verifying : basesystem-11-18.fc39.noarch 42/154
Verifying : bash-5.2.15-5.fc39.ppc64le 43/154
Verifying : binutils-2.41-5.fc40.ppc64le 44/154
Verifying : binutils-gold-2.41-5.fc40.ppc64le 45/154
Verifying : bzip2-1.0.8-16.fc39.ppc64le 46/154
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Verifying : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch 48/154
Verifying : coreutils-9.4-1.fc40.ppc64le 49/154
Verifying : coreutils-common-9.4-1.fc40.ppc64le 50/154
Verifying : cpio-2.14-4.fc39.ppc64le 51/154
Verifying : crypto-policies-20230731-1.git5ed06e0.fc39.noarc 52/154
Verifying : debugedit-5.0-10.fc39.ppc64le 53/154
Verifying : diffutils-3.10-3.fc39.ppc64le 54/154
Verifying : dwz-0.15-3.fc39.ppc64le 55/154
Verifying : ed-1.19-4.fc39.ppc64le 56/154
Verifying : efi-srpm-macros-5-9.fc39.noarch 57/154
Verifying : fedora-gpg-keys-40-0.1.noarch 58/154
Verifying : fedora-release-40-0.7.noarch 59/154
Verifying : fedora-release-common-40-0.7.noarch 60/154
Verifying : fedora-release-identity-basic-40-0.7.noarch 61/154
Verifying : fedora-repos-40-0.1.noarch 62/154
Verifying : fedora-repos-rawhide-40-0.1.noarch 63/154
Verifying : filesystem-3.18-6.fc39.ppc64le 64/154
Verifying : findutils-1:4.9.0-6.fc40.ppc64le 65/154
Verifying : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 66/154
Verifying : forge-srpm-macros-0.1.0-1.fc40.noarch 67/154
Verifying : fpc-srpm-macros-1.3-8.fc39.noarch 68/154
Verifying : gawk-5.2.2-2.fc39.ppc64le 69/154
Verifying : gdb-minimal-13.2-9.fc40.ppc64le 70/154
Verifying : gdbm-libs-1:1.23-4.fc39.ppc64le 71/154
Verifying : ghc-srpm-macros-1.6.1-2.fc39.noarch 72/154
Verifying : glibc-2.38.9000-9.fc40.ppc64le 73/154
Verifying : glibc-common-2.38.9000-9.fc40.ppc64le 74/154
Verifying : glibc-gconv-extra-2.38.9000-9.fc40.ppc64le 75/154
Verifying : glibc-minimal-langpack-2.38.9000-9.fc40.ppc64le 76/154
Verifying : gmp-1:6.2.1-5.fc39.ppc64le 77/154
Verifying : gnat-srpm-macros-6-3.fc39.noarch 78/154
Verifying : go-srpm-macros-3.2.0-7.fc40.noarch 79/154
Verifying : grep-3.11-5.fc40.ppc64le 80/154
Verifying : gzip-1.12-6.fc39.ppc64le 81/154
Verifying : info-7.0.3-3.fc39.ppc64le 82/154
Verifying : jansson-2.13.1-7.fc39.ppc64le 83/154
Verifying : kernel-srpm-macros-1.0-20.fc39.noarch 84/154
Verifying : keyutils-libs-1.6.1-7.fc39.ppc64le 85/154
Verifying : krb5-libs-1.21.2-1.fc40.ppc64le 86/154
Verifying : libacl-2.3.1-9.fc40.ppc64le 87/154
Verifying : libattr-2.5.1-9.fc40.ppc64le 88/154
Verifying : libbrotli-1.1.0-1.fc40.ppc64le 89/154
Verifying : libcap-2.48-7.fc39.ppc64le 90/154
Verifying : libcap-ng-0.8.3-8.fc40.ppc64le 91/154
Verifying : libcom_err-1.47.0-2.fc39.ppc64le 92/154
Verifying : libeconf-0.5.2-1.fc40.ppc64le 93/154
Verifying : libevent-2.1.12-9.fc39.ppc64le 94/154
Verifying : libffi-3.4.4-4.fc39.ppc64le 95/154
Verifying : libidn2-2.3.4-3.fc39.ppc64le 96/154
Verifying : libnsl2-2.0.0-6.fc39.ppc64le 97/154
Verifying : libpkgconf-1.9.5-2.fc39.ppc64le 98/154
Verifying : libpsl-0.21.2-4.fc39.ppc64le 99/154
Verifying : libpwquality-1.4.5-6.fc39.ppc64le 100/154
Verifying : librtas-2.0.4-3.fc39.ppc64le 101/154
Verifying : libselinux-3.5-5.fc39.ppc64le 102/154
Verifying : libsemanage-3.5-4.fc39.ppc64le 103/154
Verifying : libsepol-3.5-2.fc39.ppc64le 104/154
Verifying : libsigsegv-2.14-5.fc39.ppc64le 105/154
Verifying : libtasn1-4.19.0-3.fc39.ppc64le 106/154
Verifying : libtirpc-1.3.3-1.rc2.fc39.ppc64le 107/154
Verifying : libunistring-1.1-5.fc40.ppc64le 108/154
Verifying : libutempter-1.2.1-10.fc39.ppc64le 109/154
Verifying : libverto-0.3.2-6.fc39.ppc64le 110/154
Verifying : libxcrypt-4.4.36-2.fc39.ppc64le 111/154
Verifying : lua-libs-5.4.6-3.fc39.ppc64le 112/154
Verifying : lua-srpm-macros-1-9.fc39.noarch 113/154
Verifying : lz4-libs-1.9.4-4.fc39.ppc64le 114/154
Verifying : mpfr-4.2.0-3.fc39.ppc64le 115/154
Verifying : ncurses-base-6.4-7.20230520.fc40.noarch 116/154
Verifying : ncurses-libs-6.4-7.20230520.fc40.ppc64le 117/154
Verifying : ocaml-srpm-macros-8-2.fc39.noarch 118/154
Verifying : openblas-srpm-macros-2-14.fc39.noarch 119/154
Verifying : openldap-2.6.6-1.fc39.ppc64le 120/154
Verifying : p11-kit-0.25.0-2.fc39.ppc64le 121/154
Verifying : p11-kit-trust-0.25.0-2.fc39.ppc64le 122/154
Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 123/154
Verifying : pam-1.5.3-2.fc39.ppc64le 124/154
Verifying : pam-libs-1.5.3-2.fc39.ppc64le 125/154
Verifying : patch-2.7.6-22.fc39.ppc64le 126/154
Verifying : pcre2-10.42-1.fc39.2.ppc64le 127/154
Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 128/154
Verifying : perl-srpm-macros-1-51.fc39.noarch 129/154
Verifying : pkgconf-1.9.5-2.fc39.ppc64le 130/154
Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 131/154
Verifying : pkgconf-pkg-config-1.9.5-2.fc39.ppc64le 132/154
Verifying : popt-1.19-3.fc39.ppc64le 133/154
Verifying : publicsuffix-list-dafsa-20230812-1.fc40.noarch 134/154
Verifying : pyproject-srpm-macros-1.9.0-2.fc39.noarch 135/154
Verifying : python-srpm-macros-3.12-4.fc40.noarch 136/154
Verifying : qt5-srpm-macros-5.15.10-2.fc39.noarch 137/154
Verifying : qt6-srpm-macros-6.5.2-2.fc39.noarch 138/154
Verifying : readline-8.2-4.fc39.ppc64le 139/154
Verifying : rpm-sequoia-1.5.0-1.fc40.ppc64le 140/154
Verifying : rust-srpm-macros-24-5.fc40.noarch 141/154
Verifying : sed-4.8-14.fc39.ppc64le 142/154
Verifying : setup-2.14.4-1.fc39.noarch 143/154
Verifying : shadow-utils-2:4.14.0-1.fc40.ppc64le 144/154
Verifying : sqlite-libs-3.43.1-1.fc40.ppc64le 145/154
Verifying : systemd-libs-254.2-7.fc40.ppc64le 146/154
Verifying : tar-2:1.35-2.fc40.ppc64le 147/154
Verifying : tzdata-2023c-3.fc40.noarch 148/154
Verifying : unzip-6.0-62.fc39.ppc64le 149/154
Verifying : which-2.21-40.fc39.ppc64le 150/154
Verifying : xxhash-libs-0.8.2-1.fc39.ppc64le 151/154
Verifying : xz-5.4.4-1.fc39.ppc64le 152/154
Verifying : xz-libs-5.4.4-1.fc39.ppc64le 153/154
Verifying : zip-3.0-39.fc40.ppc64le 154/154
Installed:
alternatives-1.25-1.fc39.ppc64le
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.ppc64le
authselect-1.4.2-3.fc39.ppc64le
authselect-libs-1.4.2-3.fc39.ppc64le
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.ppc64le
binutils-2.41-5.fc40.ppc64le
binutils-gold-2.41-5.fc40.ppc64le
bzip2-1.0.8-16.fc39.ppc64le
bzip2-libs-1.0.8-16.fc39.ppc64le
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.ppc64le
coreutils-common-9.4-1.fc40.ppc64le
cpio-2.14-4.fc39.ppc64le
cracklib-2.9.11-2.fc40.ppc64le
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.ppc64le
cyrus-sasl-lib-2.1.28-11.fc40.ppc64le
debugedit-5.0-10.fc39.ppc64le
diffutils-3.10-3.fc39.ppc64le
dwz-0.15-3.fc39.ppc64le
ed-1.19-4.fc39.ppc64le
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.ppc64le
elfutils-debuginfod-client-0.189-6.fc40.ppc64le
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.ppc64le
elfutils-libs-0.189-6.fc40.ppc64le
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.ppc64le
file-libs-5.45-1.fc40.ppc64le
filesystem-3.18-6.fc39.ppc64le
findutils-1:4.9.0-6.fc40.ppc64le
fonts-srpm-macros-1:2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.ppc64le
gdb-minimal-13.2-9.fc40.ppc64le
gdbm-libs-1:1.23-4.fc39.ppc64le
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-9.fc40.ppc64le
glibc-common-2.38.9000-9.fc40.ppc64le
glibc-gconv-extra-2.38.9000-9.fc40.ppc64le
glibc-minimal-langpack-2.38.9000-9.fc40.ppc64le
gmp-1:6.2.1-5.fc39.ppc64le
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
grep-3.11-5.fc40.ppc64le
gzip-1.12-6.fc39.ppc64le
info-7.0.3-3.fc39.ppc64le
jansson-2.13.1-7.fc39.ppc64le
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.ppc64le
krb5-libs-1.21.2-1.fc40.ppc64le
libacl-2.3.1-9.fc40.ppc64le
libarchive-3.7.2-1.fc40.ppc64le
libattr-2.5.1-9.fc40.ppc64le
libblkid-2.39.2-1.fc40.ppc64le
libbrotli-1.1.0-1.fc40.ppc64le
libcap-2.48-7.fc39.ppc64le
libcap-ng-0.8.3-8.fc40.ppc64le
libcom_err-1.47.0-2.fc39.ppc64le
libcurl-8.3.0-1.fc40.ppc64le
libdb-5.3.28-58.fc40.ppc64le
libeconf-0.5.2-1.fc40.ppc64le
libevent-2.1.12-9.fc39.ppc64le
libfdisk-2.39.2-1.fc40.ppc64le
libffi-3.4.4-4.fc39.ppc64le
libgcc-13.2.1-1.fc40.ppc64le
libgomp-13.2.1-1.fc40.ppc64le
libidn2-2.3.4-3.fc39.ppc64le
libmount-2.39.2-1.fc40.ppc64le
libnghttp2-1.56.0-1.fc40.ppc64le
libnsl2-2.0.0-6.fc39.ppc64le
libpkgconf-1.9.5-2.fc39.ppc64le
libpsl-0.21.2-4.fc39.ppc64le
libpwquality-1.4.5-6.fc39.ppc64le
librtas-2.0.4-3.fc39.ppc64le
libselinux-3.5-5.fc39.ppc64le
libsemanage-3.5-4.fc39.ppc64le
libsepol-3.5-2.fc39.ppc64le
libsigsegv-2.14-5.fc39.ppc64le
libsmartcols-2.39.2-1.fc40.ppc64le
libssh-0.10.5-2.fc40.ppc64le
libssh-config-0.10.5-2.fc40.noarch
libstdc++-13.2.1-1.fc40.ppc64le
libtasn1-4.19.0-3.fc39.ppc64le
libtirpc-1.3.3-1.rc2.fc39.ppc64le
libunistring-1.1-5.fc40.ppc64le
libutempter-1.2.1-10.fc39.ppc64le
libuuid-2.39.2-1.fc40.ppc64le
libverto-0.3.2-6.fc39.ppc64le
libxcrypt-4.4.36-2.fc39.ppc64le
libxml2-2.11.5-1.fc40.ppc64le
libzstd-1.5.5-4.fc40.ppc64le
lua-libs-5.4.6-3.fc39.ppc64le
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.ppc64le
mpfr-4.2.0-3.fc39.ppc64le
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.ppc64le
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.ppc64le
openssl-libs-1:3.1.1-4.fc40.ppc64le
p11-kit-0.25.0-2.fc39.ppc64le
p11-kit-trust-0.25.0-2.fc39.ppc64le
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.ppc64le
pam-libs-1.5.3-2.fc39.ppc64le
patch-2.7.6-22.fc39.ppc64le
pcre2-10.42-1.fc39.2.ppc64le
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.ppc64le
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.ppc64le
popt-1.19-3.fc39.ppc64le
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.ppc64le
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.ppc64le
rpm-build-4.18.99-1.fc40.ppc64le
rpm-build-libs-4.18.99-1.fc40.ppc64le
rpm-libs-4.18.99-1.fc40.ppc64le
rpm-sequoia-1.5.0-1.fc40.ppc64le
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.ppc64le
setup-2.14.4-1.fc39.noarch
shadow-utils-2:4.14.0-1.fc40.ppc64le
sqlite-libs-3.43.1-1.fc40.ppc64le
systemd-libs-254.2-7.fc40.ppc64le
tar-2:1.35-2.fc40.ppc64le
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.ppc64le
util-linux-2.39.2-1.fc40.ppc64le
util-linux-core-2.39.2-1.fc40.ppc64le
which-2.21-40.fc39.ppc64le
xxhash-libs-0.8.2-1.fc39.ppc64le
xz-5.4.4-1.fc39.ppc64le
xz-libs-5.4.4-1.fc39.ppc64le
zip-3.0-39.fc40.ppc64le
zlib-ng-compat-2.1.3-4.fc40.ppc64le
zstd-1.5.5-4.fc40.ppc64le
Complete!
Finish: installing minimal buildroot with dnf
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.25-1.fc39.ppc64le
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.ppc64le
authselect-1.4.2-3.fc39.ppc64le
authselect-libs-1.4.2-3.fc39.ppc64le
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.ppc64le
binutils-2.41-5.fc40.ppc64le
binutils-gold-2.41-5.fc40.ppc64le
bzip2-1.0.8-16.fc39.ppc64le
bzip2-libs-1.0.8-16.fc39.ppc64le
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.ppc64le
coreutils-common-9.4-1.fc40.ppc64le
cpio-2.14-4.fc39.ppc64le
cracklib-2.9.11-2.fc40.ppc64le
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.ppc64le
cyrus-sasl-lib-2.1.28-11.fc40.ppc64le
debugedit-5.0-10.fc39.ppc64le
diffutils-3.10-3.fc39.ppc64le
dwz-0.15-3.fc39.ppc64le
ed-1.19-4.fc39.ppc64le
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.ppc64le
elfutils-debuginfod-client-0.189-6.fc40.ppc64le
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.ppc64le
elfutils-libs-0.189-6.fc40.ppc64le
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.ppc64le
file-libs-5.45-1.fc40.ppc64le
filesystem-3.18-6.fc39.ppc64le
findutils-4.9.0-6.fc40.ppc64le
fonts-srpm-macros-2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.ppc64le
gdb-minimal-13.2-9.fc40.ppc64le
gdbm-libs-1.23-4.fc39.ppc64le
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-9.fc40.ppc64le
glibc-common-2.38.9000-9.fc40.ppc64le
glibc-gconv-extra-2.38.9000-9.fc40.ppc64le
glibc-minimal-langpack-2.38.9000-9.fc40.ppc64le
gmp-6.2.1-5.fc39.ppc64le
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
gpg-pubkey-18b8e74c-62f2920f
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-5.fc40.ppc64le
gzip-1.12-6.fc39.ppc64le
info-7.0.3-3.fc39.ppc64le
jansson-2.13.1-7.fc39.ppc64le
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.ppc64le
krb5-libs-1.21.2-1.fc40.ppc64le
libacl-2.3.1-9.fc40.ppc64le
libarchive-3.7.2-1.fc40.ppc64le
libattr-2.5.1-9.fc40.ppc64le
libblkid-2.39.2-1.fc40.ppc64le
libbrotli-1.1.0-1.fc40.ppc64le
libcap-2.48-7.fc39.ppc64le
libcap-ng-0.8.3-8.fc40.ppc64le
libcom_err-1.47.0-2.fc39.ppc64le
libcurl-8.3.0-1.fc40.ppc64le
libdb-5.3.28-58.fc40.ppc64le
libeconf-0.5.2-1.fc40.ppc64le
libevent-2.1.12-9.fc39.ppc64le
libfdisk-2.39.2-1.fc40.ppc64le
libffi-3.4.4-4.fc39.ppc64le
libgcc-13.2.1-1.fc40.ppc64le
libgomp-13.2.1-1.fc40.ppc64le
libidn2-2.3.4-3.fc39.ppc64le
libmount-2.39.2-1.fc40.ppc64le
libnghttp2-1.56.0-1.fc40.ppc64le
libnsl2-2.0.0-6.fc39.ppc64le
libpkgconf-1.9.5-2.fc39.ppc64le
libpsl-0.21.2-4.fc39.ppc64le
libpwquality-1.4.5-6.fc39.ppc64le
librtas-2.0.4-3.fc39.ppc64le
libselinux-3.5-5.fc39.ppc64le
libsemanage-3.5-4.fc39.ppc64le
libsepol-3.5-2.fc39.ppc64le
libsigsegv-2.14-5.fc39.ppc64le
libsmartcols-2.39.2-1.fc40.ppc64le
libssh-0.10.5-2.fc40.ppc64le
libssh-config-0.10.5-2.fc40.noarch
libstdc++-13.2.1-1.fc40.ppc64le
libtasn1-4.19.0-3.fc39.ppc64le
libtirpc-1.3.3-1.rc2.fc39.ppc64le
libunistring-1.1-5.fc40.ppc64le
libutempter-1.2.1-10.fc39.ppc64le
libuuid-2.39.2-1.fc40.ppc64le
libverto-0.3.2-6.fc39.ppc64le
libxcrypt-4.4.36-2.fc39.ppc64le
libxml2-2.11.5-1.fc40.ppc64le
libzstd-1.5.5-4.fc40.ppc64le
lua-libs-5.4.6-3.fc39.ppc64le
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.ppc64le
mpfr-4.2.0-3.fc39.ppc64le
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.ppc64le
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.ppc64le
openssl-libs-3.1.1-4.fc40.ppc64le
p11-kit-0.25.0-2.fc39.ppc64le
p11-kit-trust-0.25.0-2.fc39.ppc64le
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.ppc64le
pam-libs-1.5.3-2.fc39.ppc64le
patch-2.7.6-22.fc39.ppc64le
pcre2-10.42-1.fc39.2.ppc64le
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.ppc64le
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.ppc64le
popt-1.19-3.fc39.ppc64le
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.ppc64le
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.ppc64le
rpm-build-4.18.99-1.fc40.ppc64le
rpm-build-libs-4.18.99-1.fc40.ppc64le
rpm-libs-4.18.99-1.fc40.ppc64le
rpm-sequoia-1.5.0-1.fc40.ppc64le
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.ppc64le
setup-2.14.4-1.fc39.noarch
shadow-utils-4.14.0-1.fc40.ppc64le
sqlite-libs-3.43.1-1.fc40.ppc64le
systemd-libs-254.2-7.fc40.ppc64le
tar-1.35-2.fc40.ppc64le
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.ppc64le
util-linux-2.39.2-1.fc40.ppc64le
util-linux-core-2.39.2-1.fc40.ppc64le
which-2.21-40.fc39.ppc64le
xxhash-libs-0.8.2-1.fc39.ppc64le
xz-5.4.4-1.fc39.ppc64le
xz-libs-5.4.4-1.fc39.ppc64le
zip-3.0-39.fc40.ppc64le
zlib-ng-compat-2.1.3-4.fc40.ppc64le
zstd-1.5.5-4.fc40.ppc64le
Start: buildsrpm
Start: rpmbuild -bs
warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689724800
Wrote: /builddir/build/SRPMS/R-Rhtslib-1.28.0-4.fc40.src.rpm
RPM build warnings:
%patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-e0paiz94/R-Rhtslib/R-Rhtslib.spec) Config(child) 1 minutes 47 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/R-Rhtslib-1.28.0-4.fc40.src.rpm) Config(fedora-rawhide-ppc64le)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695197195.027392/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695197195.027392/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Finish: chroot init
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.18.99-1.fc40.ppc64le
rpm-sequoia-1.5.0-1.fc40.ppc64le
python3-dnf-4.16.2-4.fc40.noarch
python3-dnf-plugins-core-4.4.2-1.fc39.noarch
yum-4.16.2-4.fc40.noarch
Start: build phase for R-Rhtslib-1.28.0-4.fc40.src.rpm
Start: build setup for R-Rhtslib-1.28.0-4.fc40.src.rpm
warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689724800
Wrote: /builddir/build/SRPMS/R-Rhtslib-1.28.0-4.fc40.src.rpm
RPM build warnings:
%patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository 22 kB/s | 1.5 kB 00:00
fedora 121 kB/s | 6.1 kB 00:00
Dependencies resolved.
=========================================================================================
Package Arch Version Repo Size
=========================================================================================
Installing:
R-devel ppc64le 4.3.1-3.fc40 copr_base 11 k
bzip2-devel ppc64le 1.0.8-16.fc39 fedora 214 k
libcurl-devel ppc64le 8.3.0-1.fc40 copr_base 901 k
xz-devel ppc64le 5.4.4-1.fc39 fedora 66 k
zlib-ng-compat-devel ppc64le 2.1.3-4.fc40 copr_base 34 k
Installing dependencies:
R-core ppc64le 4.3.1-3.fc40 copr_base 62 M
R-core-devel ppc64le 4.3.1-3.fc40 copr_base 86 k
R-java ppc64le 4.3.1-3.fc40 copr_base 11 k
R-java-devel ppc64le 4.3.1-3.fc40 copr_base 11 k
R-rpm-macros noarch 1.2.1-7.fc39 fedora 11 k
abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k
alsa-lib ppc64le 1.2.10-3.fc40 fedora 592 k
annobin-docs noarch 12.26-1.fc40 fedora 94 k
annobin-plugin-gcc ppc64le 12.26-1.fc40 fedora 961 k
avahi-libs ppc64le 0.8-24.fc39 fedora 72 k
brotli ppc64le 1.1.0-1.fc40 fedora 20 k
brotli-devel ppc64le 1.1.0-1.fc40 fedora 34 k
cairo ppc64le 1.17.8-5.fc40 copr_base 789 k
cmake-filesystem ppc64le 3.27.4-8.fc40 fedora 19 k
copy-jdk-configs noarch 4.1-3.fc39 fedora 28 k
cpp ppc64le 13.2.1-1.fc40 copr_base 9.8 M
crypto-policies-scripts noarch 20230731-1.git5ed06e0.fc39 fedora 115 k
cups-libs ppc64le 1:2.4.6-6.fc40 copr_base 321 k
dbus-libs ppc64le 1:1.14.10-1.fc40 fedora 177 k
default-fonts-core-sans noarch 4.0-9.fc40 fedora 32 k
desktop-file-utils ppc64le 0.26-9.fc39 fedora 78 k
emacs-filesystem noarch 1:29.1-1.fc40 copr_base 8.9 k
expat ppc64le 2.5.0-3.fc39 fedora 116 k
flexiblas ppc64le 3.3.1-5.fc39 fedora 33 k
flexiblas-devel ppc64le 3.3.1-5.fc39 fedora 117 k
flexiblas-netlib ppc64le 3.3.1-5.fc39 fedora 2.8 M
flexiblas-netlib64 ppc64le 3.3.1-5.fc39 fedora 2.7 M
flexiblas-openblas-openmp ppc64le 3.3.1-5.fc39 fedora 17 k
flexiblas-openblas-openmp64 ppc64le 3.3.1-5.fc39 fedora 17 k
fontconfig ppc64le 2.14.2-5.fc40 fedora 343 k
fontconfig-devel ppc64le 2.14.2-5.fc40 fedora 165 k
fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k
freetype ppc64le 2.13.1-2.fc40 copr_base 475 k
freetype-devel ppc64le 2.13.1-2.fc40 copr_base 913 k
fribidi ppc64le 1.0.13-2.fc39 fedora 95 k
gc ppc64le 8.2.2-4.fc39 fedora 122 k
gcc ppc64le 13.2.1-1.fc40 copr_base 31 M
gcc-c++ ppc64le 13.2.1-1.fc40 copr_base 12 M
gcc-gfortran ppc64le 13.2.1-1.fc40 copr_base 11 M
gcc-plugin-annobin ppc64le 13.2.1-1.fc40 copr_base 49 k
gettext ppc64le 0.22-2.fc39 fedora 1.1 M
gettext-envsubst ppc64le 0.22-2.fc39 fedora 37 k
gettext-libs ppc64le 0.22-2.fc39 fedora 375 k
gettext-runtime ppc64le 0.22-2.fc39 fedora 120 k
glib2 ppc64le 2.78.0-2.fc40 fedora 2.9 M
glib2-devel ppc64le 2.78.0-2.fc40 fedora 619 k
glibc-devel ppc64le 2.38.9000-9.fc40 fedora 593 k
gnutls ppc64le 3.8.1-1.fc40 fedora 1.1 M
google-noto-fonts-common noarch 20230801-3.fc40 fedora 17 k
google-noto-sans-vf-fonts noarch 20230801-3.fc40 fedora 583 k
graphite2 ppc64le 1.3.14-12.fc39 fedora 105 k
graphite2-devel ppc64le 1.3.14-12.fc39 fedora 20 k
guile22 ppc64le 2.2.7-9.fc39 fedora 6.6 M
harfbuzz ppc64le 8.2.0-1.fc40 fedora 1.0 M
harfbuzz-devel ppc64le 8.2.0-1.fc40 fedora 456 k
harfbuzz-icu ppc64le 8.2.0-1.fc40 fedora 17 k
java-17-openjdk ppc64le 1:17.0.8.0.7-1.fc39 fedora 458 k
java-17-openjdk-devel ppc64le 1:17.0.8.0.7-1.fc39 fedora 4.7 M
java-17-openjdk-headless ppc64le 1:17.0.8.0.7-1.fc39 fedora 44 M
javapackages-filesystem noarch 6.2.0-3.fc40 fedora 12 k
jbigkit-libs ppc64le 2.1-26.fc39 fedora 56 k
kernel-headers ppc64le 6.6.0-0.rc2.git0.1.fc40 fedora 1.5 M
libICE ppc64le 1.0.10-12.fc40 fedora 77 k
libRmath ppc64le 4.3.1-3.fc40 copr_base 143 k
libRmath-devel ppc64le 4.3.1-3.fc40 copr_base 16 k
libSM ppc64le 1.2.3-14.fc40 fedora 42 k
libX11 ppc64le 1.8.6-3.fc40 fedora 698 k
libX11-common noarch 1.8.6-3.fc40 fedora 175 k
libX11-devel ppc64le 1.8.6-3.fc40 fedora 1.0 M
libX11-xcb ppc64le 1.8.6-3.fc40 fedora 12 k
libXau ppc64le 1.0.11-4.fc40 fedora 32 k
libXau-devel ppc64le 1.0.11-4.fc40 fedora 13 k
libXcomposite ppc64le 0.4.5-11.fc40 fedora 24 k
libXext ppc64le 1.3.5-3.fc39 fedora 41 k
libXft ppc64le 2.3.8-4.fc40 fedora 78 k
libXft-devel ppc64le 2.3.8-4.fc40 fedora 50 k
libXi ppc64le 1.8.1-3.fc40 fedora 43 k
libXmu ppc64le 1.1.4-4.fc40 fedora 84 k
libXrender ppc64le 0.9.11-4.fc40 fedora 29 k
libXrender-devel ppc64le 0.9.11-4.fc40 fedora 19 k
libXt ppc64le 1.2.1-6.fc40 fedora 196 k
libXtst ppc64le 1.2.4-3.fc39 fedora 22 k
libasan ppc64le 13.2.1-1.fc40 copr_base 493 k
libatomic ppc64le 13.2.1-1.fc40 copr_base 35 k
libb2 ppc64le 0.98.1-9.fc39 fedora 25 k
libblkid-devel ppc64le 2.39.2-1.fc40 copr_base 18 k
libdatrie ppc64le 0.2.13-7.fc39 fedora 34 k
libffi-devel ppc64le 3.4.4-4.fc39 fedora 28 k
libfontenc ppc64le 1.1.6-3.fc40 copr_base 33 k
libgfortran ppc64le 13.2.1-1.fc40 copr_base 608 k
libicu ppc64le 73.2-2.fc39 fedora 11 M
libicu-devel ppc64le 73.2-2.fc39 fedora 925 k
libjpeg-turbo ppc64le 2.1.4-3.fc39 fedora 209 k
liblerc ppc64le 4.0.0-4.fc39 fedora 220 k
libmount-devel ppc64le 2.39.2-1.fc40 copr_base 19 k
libmpc ppc64le 1.3.1-3.fc39 fedora 95 k
libpng ppc64le 2:1.6.37-15.fc39 fedora 138 k
libpng-devel ppc64le 2:1.6.37-15.fc39 fedora 294 k
libquadmath ppc64le 13.2.1-1.fc40 copr_base 211 k
libquadmath-devel ppc64le 13.2.1-1.fc40 copr_base 36 k
libselinux-devel ppc64le 3.5-5.fc39 fedora 151 k
libsepol-devel ppc64le 3.5-2.fc39 fedora 49 k
libstdc++-devel ppc64le 13.2.1-1.fc40 copr_base 2.5 M
libthai ppc64le 0.1.29-6.fc39 fedora 215 k
libtiff ppc64le 4.4.0-8.fc40 copr_base 238 k
libtirpc-devel ppc64le 1.3.3-1.rc2.fc39 fedora 125 k
libtool-ltdl ppc64le 2.4.7-8.fc40 fedora 40 k
libubsan ppc64le 13.2.1-1.fc40 copr_base 250 k
libwebp ppc64le 1.3.2-1.fc40 fedora 266 k
libxcb ppc64le 1.13.1-12.fc39 fedora 250 k
libxcb-devel ppc64le 1.13.1-12.fc39 fedora 1.4 M
libxcrypt-devel ppc64le 4.4.36-2.fc39 fedora 30 k
libxml2-devel ppc64le 2.11.5-1.fc40 copr_base 497 k
lksctp-tools ppc64le 1.0.19-4.fc39 fedora 96 k
lua ppc64le 5.4.6-3.fc39 fedora 201 k
lua-posix ppc64le 36.2.1-3.fc39 fedora 151 k
make ppc64le 1:4.4.1-2.fc39 fedora 604 k
mkfontscale ppc64le 1.2.2-4.fc40 copr_base 35 k
mpdecimal ppc64le 2.5.1-7.fc39 fedora 104 k
nettle ppc64le 3.9.1-2.fc39 fedora 460 k
nspr ppc64le 4.35.0-13.fc40 copr_base 172 k
nss ppc64le 3.93.0-2.fc40 copr_base 790 k
nss-softokn ppc64le 3.93.0-2.fc40 copr_base 1.1 M
nss-softokn-freebl ppc64le 3.93.0-2.fc40 copr_base 343 k
nss-sysinit ppc64le 3.93.0-2.fc40 copr_base 19 k
nss-util ppc64le 3.93.0-2.fc40 copr_base 97 k
openblas ppc64le 0.3.21-6.fc39 fedora 35 k
openblas-openmp ppc64le 0.3.21-6.fc39 fedora 4.5 M
openblas-openmp64 ppc64le 0.3.21-6.fc39 fedora 4.4 M
pango ppc64le 1.51.0-1.fc40 fedora 374 k
pcre2-devel ppc64le 10.42-1.fc39.2 fedora 505 k
pcre2-utf16 ppc64le 10.42-1.fc39.2 fedora 220 k
pcre2-utf32 ppc64le 10.42-1.fc39.2 fedora 207 k
pixman ppc64le 0.42.2-2.fc39 fedora 230 k
python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M
python3 ppc64le 3.12.0~rc2-1.fc40 fedora 26 k
python3-libs ppc64le 3.12.0~rc2-1.fc40 fedora 9.3 M
python3-setuptools noarch 67.7.2-7.fc40 fedora 1.5 M
sysprof-capture-devel ppc64le 3.48.0-2.fc39 fedora 60 k
tcl ppc64le 1:8.6.13-1.fc40 copr_base 1.2 M
tcl-devel ppc64le 1:8.6.13-1.fc40 copr_base 164 k
tk ppc64le 1:8.6.13-1.fc40 fedora 1.7 M
tk-devel ppc64le 1:8.6.13-1.fc40 fedora 541 k
tre ppc64le 0.8.0-41.20140228gitc2f5d13.fc39 fedora 45 k
tre-common noarch 0.8.0-41.20140228gitc2f5d13.fc39 fedora 31 k
tre-devel ppc64le 0.8.0-41.20140228gitc2f5d13.fc39 fedora 12 k
ttmkfdir ppc64le 3.0.9-69.fc40 copr_base 56 k
tzdata-java noarch 2023c-3.fc40 fedora 48 k
xdg-utils noarch 1.1.3-15.fc40 fedora 77 k
xml-common noarch 0.6.3-61.fc39 fedora 31 k
xorg-x11-fonts-Type1 noarch 7.5-36.fc39 fedora 504 k
xorg-x11-proto-devel noarch 2023.2-3.fc40 fedora 298 k
Transaction Summary
=========================================================================================
Install 157 Packages
Total download size: 259 M
Installed size: 891 M
Downloading Packages:
(1/157): R-devel-4.3.1-3.fc40.ppc64le.rpm 154 kB/s | 11 kB 00:00
(2/157): R-core-devel-4.3.1-3.fc40.ppc64le.rpm 1.0 MB/s | 86 kB 00:00
(3/157): R-java-4.3.1-3.fc40.ppc64le.rpm 221 kB/s | 11 kB 00:00
(4/157): R-java-devel-4.3.1-3.fc40.ppc64le.rpm 156 kB/s | 11 kB 00:00
(5/157): cairo-1.17.8-5.fc40.ppc64le.rpm 3.7 MB/s | 789 kB 00:00
(6/157): cups-libs-2.4.6-6.fc40.ppc64le.rpm 1.8 MB/s | 321 kB 00:00
(7/157): cpp-13.2.1-1.fc40.ppc64le.rpm 17 MB/s | 9.8 MB 00:00
(8/157): emacs-filesystem-29.1-1.fc40.noarch.rp 44 kB/s | 8.9 kB 00:00
(9/157): freetype-2.13.1-2.fc40.ppc64le.rpm 3.2 MB/s | 475 kB 00:00
(10/157): freetype-devel-2.13.1-2.fc40.ppc64le. 3.8 MB/s | 913 kB 00:00
(11/157): gcc-c++-13.2.1-1.fc40.ppc64le.rpm 16 MB/s | 12 MB 00:00
(12/157): gcc-13.2.1-1.fc40.ppc64le.rpm 25 MB/s | 31 MB 00:01
(13/157): gcc-gfortran-13.2.1-1.fc40.ppc64le.rp 20 MB/s | 11 MB 00:00
(14/157): gcc-plugin-annobin-13.2.1-1.fc40.ppc6 339 kB/s | 49 kB 00:00
(15/157): R-core-4.3.1-3.fc40.ppc64le.rpm 24 MB/s | 62 MB 00:02
(16/157): libRmath-devel-4.3.1-3.fc40.ppc64le.r 55 kB/s | 16 kB 00:00
(17/157): libRmath-4.3.1-3.fc40.ppc64le.rpm 485 kB/s | 143 kB 00:00
(18/157): libasan-13.2.1-1.fc40.ppc64le.rpm 7.1 MB/s | 493 kB 00:00
(19/157): libatomic-13.2.1-1.fc40.ppc64le.rpm 520 kB/s | 35 kB 00:00
(20/157): libblkid-devel-2.39.2-1.fc40.ppc64le. 269 kB/s | 18 kB 00:00
(21/157): libcurl-devel-8.3.0-1.fc40.ppc64le.rp 27 MB/s | 901 kB 00:00
(22/157): libfontenc-1.1.6-3.fc40.ppc64le.rpm 683 kB/s | 33 kB 00:00
(23/157): libgfortran-13.2.1-1.fc40.ppc64le.rpm 12 MB/s | 608 kB 00:00
(24/157): libmount-devel-2.39.2-1.fc40.ppc64le. 894 kB/s | 19 kB 00:00
(25/157): libquadmath-devel-13.2.1-1.fc40.ppc64 2.7 MB/s | 36 kB 00:00
(26/157): libquadmath-13.2.1-1.fc40.ppc64le.rpm 12 MB/s | 211 kB 00:00
(27/157): libtiff-4.4.0-8.fc40.ppc64le.rpm 4.6 MB/s | 238 kB 00:00
(28/157): libstdc++-devel-13.2.1-1.fc40.ppc64le 34 MB/s | 2.5 MB 00:00
(29/157): libubsan-13.2.1-1.fc40.ppc64le.rpm 4.1 MB/s | 250 kB 00:00
(30/157): libxml2-devel-2.11.5-1.fc40.ppc64le.r 9.3 MB/s | 497 kB 00:00
(31/157): nspr-4.35.0-13.fc40.ppc64le.rpm 4.0 MB/s | 172 kB 00:00
(32/157): mkfontscale-1.2.2-4.fc40.ppc64le.rpm 685 kB/s | 35 kB 00:00
(33/157): nss-3.93.0-2.fc40.ppc64le.rpm 26 MB/s | 790 kB 00:00
(34/157): nss-softokn-3.93.0-2.fc40.ppc64le.rpm 14 MB/s | 1.1 MB 00:00
(35/157): nss-softokn-freebl-3.93.0-2.fc40.ppc6 3.6 MB/s | 343 kB 00:00
(36/157): nss-sysinit-3.93.0-2.fc40.ppc64le.rpm 251 kB/s | 19 kB 00:00
(37/157): nss-util-3.93.0-2.fc40.ppc64le.rpm 4.4 MB/s | 97 kB 00:00
(38/157): tcl-8.6.13-1.fc40.ppc64le.rpm 21 MB/s | 1.2 MB 00:00
(39/157): tcl-devel-8.6.13-1.fc40.ppc64le.rpm 2.8 MB/s | 164 kB 00:00
(40/157): ttmkfdir-3.0.9-69.fc40.ppc64le.rpm 982 kB/s | 56 kB 00:00
(41/157): zlib-ng-compat-devel-2.1.3-4.fc40.ppc 3.4 MB/s | 34 kB 00:00
(42/157): R-rpm-macros-1.2.1-7.fc39.noarch.rpm 63 kB/s | 11 kB 00:00
(43/157): abattis-cantarell-vf-fonts-0.301-10.f 252 kB/s | 121 kB 00:00
(44/157): annobin-docs-12.26-1.fc40.noarch.rpm 234 kB/s | 94 kB 00:00
(45/157): avahi-libs-0.8-24.fc39.ppc64le.rpm 592 kB/s | 72 kB 00:00
(46/157): alsa-lib-1.2.10-3.fc40.ppc64le.rpm 816 kB/s | 592 kB 00:00
(47/157): brotli-devel-1.1.0-1.fc40.ppc64le.rpm 313 kB/s | 34 kB 00:00
(48/157): annobin-plugin-gcc-12.26-1.fc40.ppc64 2.0 MB/s | 961 kB 00:00
(49/157): brotli-1.1.0-1.fc40.ppc64le.rpm 76 kB/s | 20 kB 00:00
(50/157): bzip2-devel-1.0.8-16.fc39.ppc64le.rpm 1.2 MB/s | 214 kB 00:00
(51/157): cmake-filesystem-3.27.4-8.fc40.ppc64l 255 kB/s | 19 kB 00:00
(52/157): copy-jdk-configs-4.1-3.fc39.noarch.rp 206 kB/s | 28 kB 00:00
(53/157): crypto-policies-scripts-20230731-1.gi 1.2 MB/s | 115 kB 00:00
(54/157): dbus-libs-1.14.10-1.fc40.ppc64le.rpm 2.1 MB/s | 177 kB 00:00
(55/157): expat-2.5.0-3.fc39.ppc64le.rpm 1.4 MB/s | 116 kB 00:00
(56/157): desktop-file-utils-0.26-9.fc39.ppc64l 883 kB/s | 78 kB 00:00
(57/157): default-fonts-core-sans-4.0-9.fc40.no 257 kB/s | 32 kB 00:00
(58/157): flexiblas-3.3.1-5.fc39.ppc64le.rpm 442 kB/s | 33 kB 00:00
(59/157): flexiblas-devel-3.3.1-5.fc39.ppc64le. 1.2 MB/s | 117 kB 00:00
(60/157): flexiblas-openblas-openmp-3.3.1-5.fc3 211 kB/s | 17 kB 00:00
(61/157): flexiblas-openblas-openmp64-3.3.1-5.f 196 kB/s | 17 kB 00:00
(62/157): flexiblas-netlib64-3.3.1-5.fc39.ppc64 8.8 MB/s | 2.7 MB 00:00
(63/157): fontconfig-2.14.2-5.fc40.ppc64le.rpm 2.5 MB/s | 343 kB 00:00
(64/157): fonts-filesystem-2.0.5-12.fc39.noarch 99 kB/s | 8.2 kB 00:00
(65/157): fontconfig-devel-2.14.2-5.fc40.ppc64l 1.6 MB/s | 165 kB 00:00
(66/157): gc-8.2.2-4.fc39.ppc64le.rpm 1.4 MB/s | 122 kB 00:00
(67/157): fribidi-1.0.13-2.fc39.ppc64le.rpm 1.0 MB/s | 95 kB 00:00
(68/157): gettext-envsubst-0.22-2.fc39.ppc64le. 442 kB/s | 37 kB 00:00
(69/157): gettext-0.22-2.fc39.ppc64le.rpm 10 MB/s | 1.1 MB 00:00
(70/157): gettext-runtime-0.22-2.fc39.ppc64le.r 1.6 MB/s | 120 kB 00:00
(71/157): gettext-libs-0.22-2.fc39.ppc64le.rpm 2.9 MB/s | 375 kB 00:00
(72/157): glib2-2.78.0-2.fc40.ppc64le.rpm 19 MB/s | 2.9 MB 00:00
(73/157): glib2-devel-2.78.0-2.fc40.ppc64le.rpm 4.0 MB/s | 619 kB 00:00
(74/157): glibc-devel-2.38.9000-9.fc40.ppc64le. 6.9 MB/s | 593 kB 00:00
(75/157): google-noto-fonts-common-20230801-3.f 234 kB/s | 17 kB 00:00
(76/157): gnutls-3.8.1-1.fc40.ppc64le.rpm 6.4 MB/s | 1.1 MB 00:00
(77/157): google-noto-sans-vf-fonts-20230801-3. 6.8 MB/s | 583 kB 00:00
(78/157): graphite2-1.3.14-12.fc39.ppc64le.rpm 1.3 MB/s | 105 kB 00:00
(79/157): graphite2-devel-1.3.14-12.fc39.ppc64l 224 kB/s | 20 kB 00:00
(80/157): harfbuzz-8.2.0-1.fc40.ppc64le.rpm 11 MB/s | 1.0 MB 00:00
(81/157): harfbuzz-devel-8.2.0-1.fc40.ppc64le.r 4.4 MB/s | 456 kB 00:00
(82/157): guile22-2.2.7-9.fc39.ppc64le.rpm 19 MB/s | 6.6 MB 00:00
(83/157): harfbuzz-icu-8.2.0-1.fc40.ppc64le.rpm 165 kB/s | 17 kB 00:00
(84/157): java-17-openjdk-17.0.8.0.7-1.fc39.ppc 4.4 MB/s | 458 kB 00:00
(85/157): java-17-openjdk-devel-17.0.8.0.7-1.fc 19 MB/s | 4.7 MB 00:00
(86/157): javapackages-filesystem-6.2.0-3.fc40. 109 kB/s | 12 kB 00:00
(87/157): jbigkit-libs-2.1-26.fc39.ppc64le.rpm 729 kB/s | 56 kB 00:00
(88/157): kernel-headers-6.6.0-0.rc2.git0.1.fc4 15 MB/s | 1.5 MB 00:00
(89/157): libICE-1.0.10-12.fc40.ppc64le.rpm 991 kB/s | 77 kB 00:00
(90/157): flexiblas-netlib-3.3.1-5.fc39.ppc64le 1.3 MB/s | 2.8 MB 00:02
(91/157): libSM-1.2.3-14.fc40.ppc64le.rpm 555 kB/s | 42 kB 00:00
(92/157): libX11-common-1.8.6-3.fc40.noarch.rpm 2.2 MB/s | 175 kB 00:00
(93/157): libX11-devel-1.8.6-3.fc40.ppc64le.rpm 8.9 MB/s | 1.0 MB 00:00
(94/157): libX11-xcb-1.8.6-3.fc40.ppc64le.rpm 152 kB/s | 12 kB 00:00
(95/157): libX11-1.8.6-3.fc40.ppc64le.rpm 2.0 MB/s | 698 kB 00:00
(96/157): libXau-1.0.11-4.fc40.ppc64le.rpm 421 kB/s | 32 kB 00:00
(97/157): libXau-devel-1.0.11-4.fc40.ppc64le.rp 138 kB/s | 13 kB 00:00
(98/157): libXcomposite-0.4.5-11.fc40.ppc64le.r 309 kB/s | 24 kB 00:00
(99/157): libXext-1.3.5-3.fc39.ppc64le.rpm 452 kB/s | 41 kB 00:00
(100/157): libXft-2.3.8-4.fc40.ppc64le.rpm 996 kB/s | 78 kB 00:00
(101/157): libXi-1.8.1-3.fc40.ppc64le.rpm 498 kB/s | 43 kB 00:00
(102/157): libXft-devel-2.3.8-4.fc40.ppc64le.rp 426 kB/s | 50 kB 00:00
(103/157): libXmu-1.1.4-4.fc40.ppc64le.rpm 891 kB/s | 84 kB 00:00
(104/157): libXrender-0.9.11-4.fc40.ppc64le.rpm 338 kB/s | 29 kB 00:00
(105/157): libXrender-devel-0.9.11-4.fc40.ppc64 212 kB/s | 19 kB 00:00
(106/157): libXt-1.2.1-6.fc40.ppc64le.rpm 1.3 MB/s | 196 kB 00:00
(107/157): libXtst-1.2.4-3.fc39.ppc64le.rpm 289 kB/s | 22 kB 00:00
(108/157): libb2-0.98.1-9.fc39.ppc64le.rpm 297 kB/s | 25 kB 00:00
(109/157): libdatrie-0.2.13-7.fc39.ppc64le.rpm 449 kB/s | 34 kB 00:00
(110/157): java-17-openjdk-headless-17.0.8.0.7- 24 MB/s | 44 MB 00:01
(111/157): libffi-devel-3.4.4-4.fc39.ppc64le.rp 99 kB/s | 28 kB 00:00
(112/157): libjpeg-turbo-2.1.4-3.fc39.ppc64le.r 2.6 MB/s | 209 kB 00:00
(113/157): liblerc-4.0.0-4.fc39.ppc64le.rpm 2.7 MB/s | 220 kB 00:00
(114/157): libmpc-1.3.1-3.fc39.ppc64le.rpm 1.2 MB/s | 95 kB 00:00
(115/157): libpng-1.6.37-15.fc39.ppc64le.rpm 1.8 MB/s | 138 kB 00:00
(116/157): libicu-devel-73.2-2.fc39.ppc64le.rpm 2.5 MB/s | 925 kB 00:00
(117/157): libpng-devel-1.6.37-15.fc39.ppc64le. 2.9 MB/s | 294 kB 00:00
(118/157): libselinux-devel-3.5-5.fc39.ppc64le. 1.3 MB/s | 151 kB 00:00
(119/157): libsepol-devel-3.5-2.fc39.ppc64le.rp 660 kB/s | 49 kB 00:00
(120/157): libicu-73.2-2.fc39.ppc64le.rpm 13 MB/s | 11 MB 00:00
(121/157): libtirpc-devel-1.3.3-1.rc2.fc39.ppc6 1.3 MB/s | 125 kB 00:00
(122/157): libthai-0.1.29-6.fc39.ppc64le.rpm 1.6 MB/s | 215 kB 00:00
(123/157): libtool-ltdl-2.4.7-8.fc40.ppc64le.rp 527 kB/s | 40 kB 00:00
(124/157): libwebp-1.3.2-1.fc40.ppc64le.rpm 3.3 MB/s | 266 kB 00:00
(125/157): libxcrypt-devel-4.4.36-2.fc39.ppc64l 407 kB/s | 30 kB 00:00
(126/157): libxcb-1.13.1-12.fc39.ppc64le.rpm 1.8 MB/s | 250 kB 00:00
(127/157): libxcb-devel-1.13.1-12.fc39.ppc64le. 5.1 MB/s | 1.4 MB 00:00
(128/157): lua-5.4.6-3.fc39.ppc64le.rpm 977 kB/s | 201 kB 00:00
(129/157): lua-posix-36.2.1-3.fc39.ppc64le.rpm 1.4 MB/s | 151 kB 00:00
(130/157): mpdecimal-2.5.1-7.fc39.ppc64le.rpm 1.2 MB/s | 104 kB 00:00
(131/157): nettle-3.9.1-2.fc39.ppc64le.rpm 4.5 MB/s | 460 kB 00:00
(132/157): make-4.4.1-2.fc39.ppc64le.rpm 2.0 MB/s | 604 kB 00:00
(133/157): lksctp-tools-1.0.19-4.fc39.ppc64le.r 174 kB/s | 96 kB 00:00
(134/157): openblas-0.3.21-6.fc39.ppc64le.rpm 445 kB/s | 35 kB 00:00
(135/157): pango-1.51.0-1.fc40.ppc64le.rpm 3.6 MB/s | 374 kB 00:00
(136/157): pcre2-devel-10.42-1.fc39.2.ppc64le.r 4.4 MB/s | 505 kB 00:00
(137/157): pcre2-utf16-10.42-1.fc39.2.ppc64le.r 2.3 MB/s | 220 kB 00:00
(138/157): pcre2-utf32-10.42-1.fc39.2.ppc64le.r 799 kB/s | 207 kB 00:00
(139/157): pixman-0.42.2-2.fc39.ppc64le.rpm 776 kB/s | 230 kB 00:00
(140/157): openblas-openmp-0.3.21-6.fc39.ppc64l 3.4 MB/s | 4.5 MB 00:01
(141/157): python3-3.12.0~rc2-1.fc40.ppc64le.rp 315 kB/s | 26 kB 00:00
(142/157): python-pip-wheel-23.2.1-1.fc39.noarc 1.4 MB/s | 1.5 MB 00:01
(143/157): python3-setuptools-67.7.2-7.fc40.noa 1.9 MB/s | 1.5 MB 00:00
(144/157): sysprof-capture-devel-3.48.0-2.fc39. 569 kB/s | 60 kB 00:00
(145/157): python3-libs-3.12.0~rc2-1.fc40.ppc64 5.4 MB/s | 9.3 MB 00:01
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Verifying : jbigkit-libs-2.1-26.fc39.ppc64le 89/157
Verifying : kernel-headers-6.6.0-0.rc2.git0.1.fc40.ppc64le 90/157
Verifying : libICE-1.0.10-12.fc40.ppc64le 91/157
Verifying : libSM-1.2.3-14.fc40.ppc64le 92/157
Verifying : libX11-1.8.6-3.fc40.ppc64le 93/157
Verifying : libX11-common-1.8.6-3.fc40.noarch 94/157
Verifying : libX11-devel-1.8.6-3.fc40.ppc64le 95/157
Verifying : libX11-xcb-1.8.6-3.fc40.ppc64le 96/157
Verifying : libXau-1.0.11-4.fc40.ppc64le 97/157
Verifying : libXau-devel-1.0.11-4.fc40.ppc64le 98/157
Verifying : libXcomposite-0.4.5-11.fc40.ppc64le 99/157
Verifying : libXext-1.3.5-3.fc39.ppc64le 100/157
Verifying : libXft-2.3.8-4.fc40.ppc64le 101/157
Verifying : libXft-devel-2.3.8-4.fc40.ppc64le 102/157
Verifying : libXi-1.8.1-3.fc40.ppc64le 103/157
Verifying : libXmu-1.1.4-4.fc40.ppc64le 104/157
Verifying : libXrender-0.9.11-4.fc40.ppc64le 105/157
Verifying : libXrender-devel-0.9.11-4.fc40.ppc64le 106/157
Verifying : libXt-1.2.1-6.fc40.ppc64le 107/157
Verifying : libXtst-1.2.4-3.fc39.ppc64le 108/157
Verifying : libb2-0.98.1-9.fc39.ppc64le 109/157
Verifying : libdatrie-0.2.13-7.fc39.ppc64le 110/157
Verifying : libffi-devel-3.4.4-4.fc39.ppc64le 111/157
Verifying : libicu-73.2-2.fc39.ppc64le 112/157
Verifying : libicu-devel-73.2-2.fc39.ppc64le 113/157
Verifying : libjpeg-turbo-2.1.4-3.fc39.ppc64le 114/157
Verifying : liblerc-4.0.0-4.fc39.ppc64le 115/157
Verifying : libmpc-1.3.1-3.fc39.ppc64le 116/157
Verifying : libpng-2:1.6.37-15.fc39.ppc64le 117/157
Verifying : libpng-devel-2:1.6.37-15.fc39.ppc64le 118/157
Verifying : libselinux-devel-3.5-5.fc39.ppc64le 119/157
Verifying : libsepol-devel-3.5-2.fc39.ppc64le 120/157
Verifying : libthai-0.1.29-6.fc39.ppc64le 121/157
Verifying : libtirpc-devel-1.3.3-1.rc2.fc39.ppc64le 122/157
Verifying : libtool-ltdl-2.4.7-8.fc40.ppc64le 123/157
Verifying : libwebp-1.3.2-1.fc40.ppc64le 124/157
Verifying : libxcb-1.13.1-12.fc39.ppc64le 125/157
Verifying : libxcb-devel-1.13.1-12.fc39.ppc64le 126/157
Verifying : libxcrypt-devel-4.4.36-2.fc39.ppc64le 127/157
Verifying : lksctp-tools-1.0.19-4.fc39.ppc64le 128/157
Verifying : lua-5.4.6-3.fc39.ppc64le 129/157
Verifying : lua-posix-36.2.1-3.fc39.ppc64le 130/157
Verifying : make-1:4.4.1-2.fc39.ppc64le 131/157
Verifying : mpdecimal-2.5.1-7.fc39.ppc64le 132/157
Verifying : nettle-3.9.1-2.fc39.ppc64le 133/157
Verifying : openblas-0.3.21-6.fc39.ppc64le 134/157
Verifying : openblas-openmp-0.3.21-6.fc39.ppc64le 135/157
Verifying : openblas-openmp64-0.3.21-6.fc39.ppc64le 136/157
Verifying : pango-1.51.0-1.fc40.ppc64le 137/157
Verifying : pcre2-devel-10.42-1.fc39.2.ppc64le 138/157
Verifying : pcre2-utf16-10.42-1.fc39.2.ppc64le 139/157
Verifying : pcre2-utf32-10.42-1.fc39.2.ppc64le 140/157
Verifying : pixman-0.42.2-2.fc39.ppc64le 141/157
Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 142/157
Verifying : python3-3.12.0~rc2-1.fc40.ppc64le 143/157
Verifying : python3-libs-3.12.0~rc2-1.fc40.ppc64le 144/157
Verifying : python3-setuptools-67.7.2-7.fc40.noarch 145/157
Verifying : sysprof-capture-devel-3.48.0-2.fc39.ppc64le 146/157
Verifying : tk-1:8.6.13-1.fc40.ppc64le 147/157
Verifying : tk-devel-1:8.6.13-1.fc40.ppc64le 148/157
Verifying : tre-0.8.0-41.20140228gitc2f5d13.fc39.ppc64le 149/157
Verifying : tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noar 150/157
Verifying : tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.ppc64 151/157
Verifying : tzdata-java-2023c-3.fc40.noarch 152/157
Verifying : xdg-utils-1.1.3-15.fc40.noarch 153/157
Verifying : xml-common-0.6.3-61.fc39.noarch 154/157
Verifying : xorg-x11-fonts-Type1-7.5-36.fc39.noarch 155/157
Verifying : xorg-x11-proto-devel-2023.2-3.fc40.noarch 156/157
Verifying : xz-devel-5.4.4-1.fc39.ppc64le 157/157
Installed:
R-core-4.3.1-3.fc40.ppc64le
R-core-devel-4.3.1-3.fc40.ppc64le
R-devel-4.3.1-3.fc40.ppc64le
R-java-4.3.1-3.fc40.ppc64le
R-java-devel-4.3.1-3.fc40.ppc64le
R-rpm-macros-1.2.1-7.fc39.noarch
abattis-cantarell-vf-fonts-0.301-10.fc39.noarch
alsa-lib-1.2.10-3.fc40.ppc64le
annobin-docs-12.26-1.fc40.noarch
annobin-plugin-gcc-12.26-1.fc40.ppc64le
avahi-libs-0.8-24.fc39.ppc64le
brotli-1.1.0-1.fc40.ppc64le
brotli-devel-1.1.0-1.fc40.ppc64le
bzip2-devel-1.0.8-16.fc39.ppc64le
cairo-1.17.8-5.fc40.ppc64le
cmake-filesystem-3.27.4-8.fc40.ppc64le
copy-jdk-configs-4.1-3.fc39.noarch
cpp-13.2.1-1.fc40.ppc64le
crypto-policies-scripts-20230731-1.git5ed06e0.fc39.noarch
cups-libs-1:2.4.6-6.fc40.ppc64le
dbus-libs-1:1.14.10-1.fc40.ppc64le
default-fonts-core-sans-4.0-9.fc40.noarch
desktop-file-utils-0.26-9.fc39.ppc64le
emacs-filesystem-1:29.1-1.fc40.noarch
expat-2.5.0-3.fc39.ppc64le
flexiblas-3.3.1-5.fc39.ppc64le
flexiblas-devel-3.3.1-5.fc39.ppc64le
flexiblas-netlib-3.3.1-5.fc39.ppc64le
flexiblas-netlib64-3.3.1-5.fc39.ppc64le
flexiblas-openblas-openmp-3.3.1-5.fc39.ppc64le
flexiblas-openblas-openmp64-3.3.1-5.fc39.ppc64le
fontconfig-2.14.2-5.fc40.ppc64le
fontconfig-devel-2.14.2-5.fc40.ppc64le
fonts-filesystem-1:2.0.5-12.fc39.noarch
freetype-2.13.1-2.fc40.ppc64le
freetype-devel-2.13.1-2.fc40.ppc64le
fribidi-1.0.13-2.fc39.ppc64le
gc-8.2.2-4.fc39.ppc64le
gcc-13.2.1-1.fc40.ppc64le
gcc-c++-13.2.1-1.fc40.ppc64le
gcc-gfortran-13.2.1-1.fc40.ppc64le
gcc-plugin-annobin-13.2.1-1.fc40.ppc64le
gettext-0.22-2.fc39.ppc64le
gettext-envsubst-0.22-2.fc39.ppc64le
gettext-libs-0.22-2.fc39.ppc64le
gettext-runtime-0.22-2.fc39.ppc64le
glib2-2.78.0-2.fc40.ppc64le
glib2-devel-2.78.0-2.fc40.ppc64le
glibc-devel-2.38.9000-9.fc40.ppc64le
gnutls-3.8.1-1.fc40.ppc64le
google-noto-fonts-common-20230801-3.fc40.noarch
google-noto-sans-vf-fonts-20230801-3.fc40.noarch
graphite2-1.3.14-12.fc39.ppc64le
graphite2-devel-1.3.14-12.fc39.ppc64le
guile22-2.2.7-9.fc39.ppc64le
harfbuzz-8.2.0-1.fc40.ppc64le
harfbuzz-devel-8.2.0-1.fc40.ppc64le
harfbuzz-icu-8.2.0-1.fc40.ppc64le
java-17-openjdk-1:17.0.8.0.7-1.fc39.ppc64le
java-17-openjdk-devel-1:17.0.8.0.7-1.fc39.ppc64le
java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.ppc64le
javapackages-filesystem-6.2.0-3.fc40.noarch
jbigkit-libs-2.1-26.fc39.ppc64le
kernel-headers-6.6.0-0.rc2.git0.1.fc40.ppc64le
libICE-1.0.10-12.fc40.ppc64le
libRmath-4.3.1-3.fc40.ppc64le
libRmath-devel-4.3.1-3.fc40.ppc64le
libSM-1.2.3-14.fc40.ppc64le
libX11-1.8.6-3.fc40.ppc64le
libX11-common-1.8.6-3.fc40.noarch
libX11-devel-1.8.6-3.fc40.ppc64le
libX11-xcb-1.8.6-3.fc40.ppc64le
libXau-1.0.11-4.fc40.ppc64le
libXau-devel-1.0.11-4.fc40.ppc64le
libXcomposite-0.4.5-11.fc40.ppc64le
libXext-1.3.5-3.fc39.ppc64le
libXft-2.3.8-4.fc40.ppc64le
libXft-devel-2.3.8-4.fc40.ppc64le
libXi-1.8.1-3.fc40.ppc64le
libXmu-1.1.4-4.fc40.ppc64le
libXrender-0.9.11-4.fc40.ppc64le
libXrender-devel-0.9.11-4.fc40.ppc64le
libXt-1.2.1-6.fc40.ppc64le
libXtst-1.2.4-3.fc39.ppc64le
libasan-13.2.1-1.fc40.ppc64le
libatomic-13.2.1-1.fc40.ppc64le
libb2-0.98.1-9.fc39.ppc64le
libblkid-devel-2.39.2-1.fc40.ppc64le
libcurl-devel-8.3.0-1.fc40.ppc64le
libdatrie-0.2.13-7.fc39.ppc64le
libffi-devel-3.4.4-4.fc39.ppc64le
libfontenc-1.1.6-3.fc40.ppc64le
libgfortran-13.2.1-1.fc40.ppc64le
libicu-73.2-2.fc39.ppc64le
libicu-devel-73.2-2.fc39.ppc64le
libjpeg-turbo-2.1.4-3.fc39.ppc64le
liblerc-4.0.0-4.fc39.ppc64le
libmount-devel-2.39.2-1.fc40.ppc64le
libmpc-1.3.1-3.fc39.ppc64le
libpng-2:1.6.37-15.fc39.ppc64le
libpng-devel-2:1.6.37-15.fc39.ppc64le
libquadmath-13.2.1-1.fc40.ppc64le
libquadmath-devel-13.2.1-1.fc40.ppc64le
libselinux-devel-3.5-5.fc39.ppc64le
libsepol-devel-3.5-2.fc39.ppc64le
libstdc++-devel-13.2.1-1.fc40.ppc64le
libthai-0.1.29-6.fc39.ppc64le
libtiff-4.4.0-8.fc40.ppc64le
libtirpc-devel-1.3.3-1.rc2.fc39.ppc64le
libtool-ltdl-2.4.7-8.fc40.ppc64le
libubsan-13.2.1-1.fc40.ppc64le
libwebp-1.3.2-1.fc40.ppc64le
libxcb-1.13.1-12.fc39.ppc64le
libxcb-devel-1.13.1-12.fc39.ppc64le
libxcrypt-devel-4.4.36-2.fc39.ppc64le
libxml2-devel-2.11.5-1.fc40.ppc64le
lksctp-tools-1.0.19-4.fc39.ppc64le
lua-5.4.6-3.fc39.ppc64le
lua-posix-36.2.1-3.fc39.ppc64le
make-1:4.4.1-2.fc39.ppc64le
mkfontscale-1.2.2-4.fc40.ppc64le
mpdecimal-2.5.1-7.fc39.ppc64le
nettle-3.9.1-2.fc39.ppc64le
nspr-4.35.0-13.fc40.ppc64le
nss-3.93.0-2.fc40.ppc64le
nss-softokn-3.93.0-2.fc40.ppc64le
nss-softokn-freebl-3.93.0-2.fc40.ppc64le
nss-sysinit-3.93.0-2.fc40.ppc64le
nss-util-3.93.0-2.fc40.ppc64le
openblas-0.3.21-6.fc39.ppc64le
openblas-openmp-0.3.21-6.fc39.ppc64le
openblas-openmp64-0.3.21-6.fc39.ppc64le
pango-1.51.0-1.fc40.ppc64le
pcre2-devel-10.42-1.fc39.2.ppc64le
pcre2-utf16-10.42-1.fc39.2.ppc64le
pcre2-utf32-10.42-1.fc39.2.ppc64le
pixman-0.42.2-2.fc39.ppc64le
python-pip-wheel-23.2.1-1.fc39.noarch
python3-3.12.0~rc2-1.fc40.ppc64le
python3-libs-3.12.0~rc2-1.fc40.ppc64le
python3-setuptools-67.7.2-7.fc40.noarch
sysprof-capture-devel-3.48.0-2.fc39.ppc64le
tcl-1:8.6.13-1.fc40.ppc64le
tcl-devel-1:8.6.13-1.fc40.ppc64le
tk-1:8.6.13-1.fc40.ppc64le
tk-devel-1:8.6.13-1.fc40.ppc64le
tre-0.8.0-41.20140228gitc2f5d13.fc39.ppc64le
tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noarch
tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.ppc64le
ttmkfdir-3.0.9-69.fc40.ppc64le
tzdata-java-2023c-3.fc40.noarch
xdg-utils-1.1.3-15.fc40.noarch
xml-common-0.6.3-61.fc39.noarch
xorg-x11-fonts-Type1-7.5-36.fc39.noarch
xorg-x11-proto-devel-2023.2-3.fc40.noarch
xz-devel-5.4.4-1.fc39.ppc64le
zlib-ng-compat-devel-2.1.3-4.fc40.ppc64le
Complete!
Finish: build setup for R-Rhtslib-1.28.0-4.fc40.src.rpm
Start: rpmbuild R-Rhtslib-1.28.0-4.fc40.src.rpm
warning: %patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689724800
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.n20B2T
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf Rhtslib
+ /usr/bin/mkdir -p Rhtslib
+ cd Rhtslib
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Rhtslib_1.28.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ rm -rf /builddir/build/BUILD/Rhtslib-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/Rhtslib-SPECPARTS
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
Patch #0 (R-Rhtslib-zlibbioc.patch):
+ echo 'Patch #0 (R-Rhtslib-zlibbioc.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .zlibbioc --fuzz=0
patching file Rhtslib/DESCRIPTION
patching file Rhtslib/NAMESPACE
Patch #1 (R-Rhtslib-buildroot-fix.patch):
+ echo 'Patch #1 (R-Rhtslib-buildroot-fix.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fix --fuzz=0
patching file Rhtslib/src/Makevars.common
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.uN3sQb
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Rhtslib
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.KyYKgh
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le
++ dirname /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Rhtslib
+ mkdir -p /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library
+ R CMD INSTALL -l /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library Rhtslib
* installing *source* package ‘Rhtslib’ ...
** using non-staged installation via StagedInstall field
** libs
using C compiler: ‘gcc (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)’
cd "htslib-1.7" && make -f "/usr/lib64/R/etc/Makeconf" -f "Makefile.Rhtslib"
make[1]: Entering directory '/builddir/build/BUILD/Rhtslib/Rhtslib/src/htslib-1.7'
Makefile.Rhtslib:131: warning: overriding recipe for target '.c.o'
/usr/lib64/R/etc/Makeconf:191: warning: ignoring old recipe for target '.c.o'
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kfunc.o kfunc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o knetfile.o knetfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kstring.o kstring.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bcf_sr_sort.o bcf_sr_sort.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bgzf.o bgzf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o errmod.o errmod.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o faidx.o faidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile.o hfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_net.o hfile_net.c
echo '#define HTS_VERSION "1.7"' > version.h
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts.o hts.c
hts.c: In function ‘hts_idx_init’:
hts.c:1366:59: warning: overflow in conversion from ‘uint32_t’ {aka ‘unsigned int’} to ‘int’ changes value from ‘idx->z.last_bin = 4294967295’ to ‘-1’ [-Woverflow]
1366 | idx->z.save_bin = idx->z.save_tid = idx->z.last_tid = idx->z.last_bin = 0xffffffffu;
| ^~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_os.o hts_os.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o md5.o md5.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o multipart.o multipart.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o probaln.o probaln.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o realn.o realn.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o regidx.o regidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o sam.o sam.c
sam.c: In function ‘bam_hdr_write’:
sam.c:233:5: warning: ‘strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
233 | strncpy(buf, "BAM\1", 4);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o synced_bcf_reader.o synced_bcf_reader.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf_sweep.o vcf_sweep.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o tbx.o tbx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o textutils.o textutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o thread_pool.o thread_pool.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf.o vcf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcfutils.o vcfutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_codecs.o cram/cram_codecs.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_decode.o cram/cram_decode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_encode.o cram/cram_encode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_external.o cram/cram_external.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_index.o cram/cram_index.c
In file included from ./textutils_internal.h:32,
from ./hts_internal.h:31,
from cram/cram_index.c:65:
In function ‘kputsn’,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
./htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ~~~~~~~~~~~^~~
In file included from /usr/include/string.h:548,
from cram/cram_index.c:57:
In function ‘memcpy’,
inlined from ‘kputsn’ at ./htslib/kstring.h:148:2,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
30 | __glibc_objsize0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_io.o cram/cram_io.c
cram/cram_io.c: In function ‘cram_populate_ref’:
cram/cram_io.c:2071:9: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
2071 | strncpy(path, path2, PATH_MAX);
| ^
cram/cram_io.c:2178:34: warning: ‘.tmp_’ directive writing 5 bytes into a region of size between 1 and 4096 [-Wformat-overflow=]
2178 | sprintf(path_tmp, "%s.tmp_%d_%u_%u", path, pid, thrid, t);
| ^~~~~
In file included from /usr/include/stdio.h:964,
from cram/cram_io.c:49:
In function ‘*__sprintfieee128’,
inlined from ‘cram_populate_ref’ at cram/cram_io.c:2178:6:
/usr/include/bits/stdio2.h:30:10: note: ‘*__sprintf_chkieee128’ output between 11 and 4134 bytes into a destination of size 4096
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
cram/cram_io.c: In function ‘cram_write_SAM_hdr’:
cram/cram_io.c:3677:13: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
3677 | strncpy(out, in, PATH_MAX);
| ^
cram/cram_io.c: In function ‘cram_dopen’:
cram/cram_io.c:4055:9: warning: ‘strncpy’ specified bound 20 equals destination size [-Wstringop-truncation]
4055 | strncpy(def->file_id, filename, 20);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_samtools.o cram/cram_samtools.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_stats.o cram/cram_stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/files.o cram/files.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/mFILE.o cram/mFILE.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/open_trace_file.o cram/open_trace_file.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/pooled_alloc.o cram/pooled_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/rANS_static.o cram/rANS_static.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/sam_header.o cram/sam_header.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/string_alloc.o cram/string_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_libcurl.o hfile_libcurl.c
hfile_libcurl.c: In function ‘libcurl_open’:
hfile_libcurl.c:1187:9: warning: ‘CURLINFO_CONTENT_LENGTH_DOWNLOAD’ is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations]
1187 | if (curl_easy_getinfo(fp->easy, CURLINFO_CONTENT_LENGTH_DOWNLOAD,
| ^~
In file included from hfile_libcurl.c:45:
/usr/include/curl/curl.h:2883:3: note: declared here
2883 | CURLINFO_CONTENT_LENGTH_DOWNLOAD
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ar -rc libhts.a kfunc.o knetfile.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o hfile.o hfile_net.o hts.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o sam.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_samtools.o cram/cram_stats.o cram/files.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/rANS_static.o cram/sam_header.o cram/string_alloc.o hfile_libcurl.o
ranlib libhts.a
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kfunc.pico kfunc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o knetfile.pico knetfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kstring.pico kstring.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bcf_sr_sort.pico bcf_sr_sort.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bgzf.pico bgzf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o errmod.pico errmod.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o faidx.pico faidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile.pico hfile.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_net.pico hfile_net.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts.pico hts.c
hts.c: In function ‘hts_idx_init’:
hts.c:1366:59: warning: overflow in conversion from ‘uint32_t’ {aka ‘unsigned int’} to ‘int’ changes value from ‘idx->z.last_bin = 4294967295’ to ‘-1’ [-Woverflow]
1366 | idx->z.save_bin = idx->z.save_tid = idx->z.last_tid = idx->z.last_bin = 0xffffffffu;
| ^~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_os.pico hts_os.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o md5.pico md5.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o multipart.pico multipart.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o probaln.pico probaln.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o realn.pico realn.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o regidx.pico regidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o sam.pico sam.c
sam.c: In function ‘bam_hdr_write’:
sam.c:233:5: warning: ‘strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
233 | strncpy(buf, "BAM\1", 4);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o synced_bcf_reader.pico synced_bcf_reader.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf_sweep.pico vcf_sweep.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o tbx.pico tbx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o textutils.pico textutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o thread_pool.pico thread_pool.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf.pico vcf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcfutils.pico vcfutils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_codecs.pico cram/cram_codecs.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_decode.pico cram/cram_decode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_encode.pico cram/cram_encode.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_external.pico cram/cram_external.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_index.pico cram/cram_index.c
In file included from ./textutils_internal.h:32,
from ./hts_internal.h:31,
from cram/cram_index.c:65:
In function ‘kputsn’,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
./htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ~~~~~~~~~~~^~~
In file included from /usr/include/string.h:548,
from cram/cram_index.c:57:
In function ‘memcpy’,
inlined from ‘kputsn’ at ./htslib/kstring.h:148:2,
inlined from ‘kputs’ at ./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
30 | __glibc_objsize0 (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_io.pico cram/cram_io.c
cram/cram_io.c: In function ‘cram_populate_ref’:
cram/cram_io.c:2071:9: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
2071 | strncpy(path, path2, PATH_MAX);
| ^
cram/cram_io.c:2178:34: warning: ‘.tmp_’ directive writing 5 bytes into a region of size between 1 and 4096 [-Wformat-overflow=]
2178 | sprintf(path_tmp, "%s.tmp_%d_%u_%u", path, pid, thrid, t);
| ^~~~~
In file included from /usr/include/stdio.h:964,
from cram/cram_io.c:49:
In function ‘*__sprintfieee128’,
inlined from ‘cram_populate_ref’ at cram/cram_io.c:2178:6:
/usr/include/bits/stdio2.h:30:10: note: ‘*__sprintf_chkieee128’ output between 11 and 4134 bytes into a destination of size 4096
30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
31 | __glibc_objsize (__s), __fmt,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
32 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
cram/cram_io.c: In function ‘cram_write_SAM_hdr’:
cram/cram_io.c:3677:13: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
3677 | strncpy(out, in, PATH_MAX);
| ^
cram/cram_io.c: In function ‘cram_dopen’:
cram/cram_io.c:4055:9: warning: ‘strncpy’ specified bound 20 equals destination size [-Wstringop-truncation]
4055 | strncpy(def->file_id, filename, 20);
| ^
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_samtools.pico cram/cram_samtools.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_stats.pico cram/cram_stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/files.pico cram/files.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/mFILE.pico cram/mFILE.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/open_trace_file.pico cram/open_trace_file.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/pooled_alloc.pico cram/pooled_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/rANS_static.pico cram/rANS_static.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/sam_header.pico cram/sam_header.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/string_alloc.pico cram/string_alloc.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -fpic -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_libcurl.pico hfile_libcurl.c
hfile_libcurl.c: In function ‘libcurl_open’:
hfile_libcurl.c:1187:9: warning: ‘CURLINFO_CONTENT_LENGTH_DOWNLOAD’ is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations]
1187 | if (curl_easy_getinfo(fp->easy, CURLINFO_CONTENT_LENGTH_DOWNLOAD,
| ^~
In file included from hfile_libcurl.c:45:
/usr/include/curl/curl.h:2883:3: note: declared here
2883 | CURLINFO_CONTENT_LENGTH_DOWNLOAD
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -shared -Wl,-soname,libhts.so.2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libhts.so kfunc.pico knetfile.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico hfile.pico hfile_net.pico hts.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico sam.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_samtools.pico cram/cram_stats.pico cram/files.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/rANS_static.pico cram/sam_header.pico cram/string_alloc.pico hfile_libcurl.pico -lz -lm -lbz2 -llzma -lcurl -lpthread
In function ‘kputsn’,
inlined from ‘kputs’ at htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ^
In function ‘memcpy’,
inlined from ‘kputsn’ at htslib/kstring.h:148:2,
inlined from ‘kputs’ at htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘__builtin_memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^
ln -sf libhts.so libhts.so.2
make[1]: Leaving directory '/builddir/build/BUILD/Rhtslib/Rhtslib/src/htslib-1.7'
mkdir -p "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/include/htslib"
cd "htslib-1.7/htslib" && cp * "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/include/htslib" && cd .. && cp textutils_internal.h hts_internal.h "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/include"
gcc -I"/usr/include/R" -DNDEBUG -D_FILE_OFFSET_BITS=64 -Ihtslib-1.7 -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c R_init_Rhtslib.c -o R_init_Rhtslib.o
mkdir -p "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/usrlib"
cd "htslib-1.7" && cp libhts.so libhts.a "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/usrlib"
cd "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/usrlib" && ln -s libhts.so libhts.so.2
gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Rhtslib.so R_init_Rhtslib.o /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/usrlib/libhts.a -lcurl -L/usr/lib64/R/lib -lR
In function ‘kputsn’,
inlined from ‘kputs’ at htslib-1.7/./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at htslib-1.7/cram/cram_index.c:571:9:
htslib-1.7/./htslib/kstring.h:150:20: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
150 | s->s[s->l] = 0;
| ^
In function ‘memcpy’,
inlined from ‘kputsn’ at htslib-1.7/./htslib/kstring.h:148:2,
inlined from ‘kputs’ at htslib-1.7/./htslib/kstring.h:156:9,
inlined from ‘cram_index_build’ at htslib-1.7/cram/cram_index.c:571:9:
/usr/include/bits/string_fortified.h:29:10: warning: ‘__builtin_memcpy’ specified bound 18446744073709551614 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
29 | return __builtin___memcpy_chk (__dest, __src, __len,
| ^
mkdir -p "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/testdata/tabix"
cd "htslib-1.7/test" && (cp *.sam *.bam *.vcf *.bcf *.cram *.fa *.fa.fai *.gff *.bed "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/testdata" 2>/dev/null || true) && cd tabix && (cp *.sam *.bam *.vcf *.bcf *.cram *.fa *.fa.fai *.gff *.bed "/builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/testdata/tabix" 2>/dev/null || true)
installing to /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/Rhtslib/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘Rhtslib’
finding HTML links ... done
Rhtslib-package html
pkgconfig html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Rhtslib)
+ test -d Rhtslib/src
+ cd Rhtslib/src
+ rm -f R_init_Rhtslib.o Rhtslib.so
+ rm -f /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le/usr/lib64/R/library/R.css
+ /usr/bin/find-debuginfo -j5 --strict-build-id -m -i --build-id-seed 1.28.0-4.fc40 --unique-debug-suffix -1.28.0-4.fc40.ppc64le --unique-debug-src-base R-Rhtslib-1.28.0-4.fc40.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/Rhtslib
find-debuginfo: starting
Extracting debug info from 2 files
DWARF-compressing 2 files
sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/R-Rhtslib-1.28.0-4.fc40.ppc64le
3112 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j5
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.uZWe9Q
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd Rhtslib
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: R-Rhtslib-1.28.0-4.fc40.ppc64le
Provides: R(Rhtslib) = 1.28.0 R-Rhtslib = 1.28.0-4.fc40 R-Rhtslib(ppc-64) = 1.28.0-4.fc40 libhts.so.2()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: R(ABI) = 4.3 R-core libR.so()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libcurl.so.4()(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libz.so.1()(64bit) libz.so.1(ZLIB_1.2.0)(64bit) rtld(GNU_HASH)
Suggests: R(BiocStyle) R(knitr) R(rmarkdown)
Processing files: R-Rhtslib-devel-1.28.0-4.fc40.ppc64le
Provides: R-Rhtslib-devel = 1.28.0-4.fc40 R-Rhtslib-devel(ppc-64) = 1.28.0-4.fc40 R-Rhtslib-static = 1.28.0-4.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-Rhtslib-debugsource-1.28.0-4.fc40.ppc64le
Provides: R-Rhtslib-debugsource = 1.28.0-4.fc40 R-Rhtslib-debugsource(ppc-64) = 1.28.0-4.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-Rhtslib-debuginfo-1.28.0-4.fc40.ppc64le
Provides: R-Rhtslib-debuginfo = 1.28.0-4.fc40 R-Rhtslib-debuginfo(ppc-64) = 1.28.0-4.fc40 debuginfo(build-id) = a44f66efb6e0ab40ea4aa580544ba6de90057b84 debuginfo(build-id) = b47b6ac81efad7476e83371c91a94f9f5c0c2d2c libhts.so-1.28.0-4.fc40.ppc64le.debug()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: R-Rhtslib-debugsource(ppc-64) = 1.28.0-4.fc40
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le
Wrote: /builddir/build/RPMS/R-Rhtslib-devel-1.28.0-4.fc40.ppc64le.rpm
Wrote: /builddir/build/RPMS/R-Rhtslib-debugsource-1.28.0-4.fc40.ppc64le.rpm
Wrote: /builddir/build/RPMS/R-Rhtslib-debuginfo-1.28.0-4.fc40.ppc64le.rpm
Wrote: /builddir/build/RPMS/R-Rhtslib-1.28.0-4.fc40.ppc64le.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.20uktO
+ umask 022
+ cd /builddir/build/BUILD
+ cd Rhtslib
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-Rhtslib-1.28.0-4.fc40.ppc64le
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.0KMX74
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/Rhtslib-SPECPARTS
+ rm -rf Rhtslib Rhtslib.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
RPM build warnings:
%patchN is deprecated (2 usages found), use %patch N (or %patch -P N)
Finish: rpmbuild R-Rhtslib-1.28.0-4.fc40.src.rpm
Finish: build phase for R-Rhtslib-1.28.0-4.fc40.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1695197195.027392/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/R-Rhtslib-1.28.0-4.fc40.src.rpm) Config(child) 2 minutes 7 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
"packages": [
{
"name": "R-Rhtslib-debuginfo",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "ppc64le"
},
{
"name": "R-Rhtslib-debugsource",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "ppc64le"
},
{
"name": "R-Rhtslib",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "src"
},
{
"name": "R-Rhtslib",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "ppc64le"
},
{
"name": "R-Rhtslib-devel",
"epoch": null,
"version": "1.28.0",
"release": "4.fc40",
"arch": "ppc64le"
}
]
}
RPMResults finished