Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c290' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6408261-fedora-rawhide-ppc64le --chroot fedora-rawhide-ppc64le


Version: 0.69
PID: 67336
Logging PID: 67337
Task:
{'appstream': False,
 'background': True,
 'build_id': 6408261,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-ppc64le',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': '9a1c29996af7c4c77ddea2c5f9443e30fa48ef01',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/samtools',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'samtools',
 'package_version': '1.15.1-3',
 'project_dirname': 'zlib-ng-compat-mpb',
 'project_name': 'zlib-ng-compat-mpb',
 'project_owner': 'tuliom',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/tuliom/zlib-ng-compat-mpb/fedora-rawhide-ppc64le/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'tuliom/zlib-ng-compat-mpb--tuliom',
 'source_json': {},
 'source_type': None,
 'submitter': 'tuliom',
 'tags': [],
 'task_id': '6408261-fedora-rawhide-ppc64le',
 'timeout': 115200,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/samtools /var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/samtools', '/var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools'...

Running: git checkout 9a1c29996af7c4c77ddea2c5f9443e30fa48ef01 --

cmd: ['git', 'checkout', '9a1c29996af7c4c77ddea2c5f9443e30fa48ef01', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools
rc: 0
stdout: 
stderr: Note: switching to '9a1c29996af7c4c77ddea2c5f9443e30fa48ef01'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 9a1c299 automatic import of samtools

Running: copr-distgit-client sources

cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools
rc: 0
stdout: 
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading samtools-1.15.1.tar.bz2
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o samtools-1.15.1.tar.bz2 --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/tuliom/zlib-ng-compat-mpb/samtools/samtools-1.15.1.tar.bz2/md5/b71d1aa1de9749773b1a04bf54281ca0/samtools-1.15.1.tar.bz2
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 7648k  100 7648k    0     0  25.5M      0 --:--:-- --:--:-- --:--:-- 25.6M
INFO: Reading stdout from command: md5sum samtools-1.15.1.tar.bz2

Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools/samtools.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1695069238.164412 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.1.1 starting (python version = 3.11.3, NVR = mock-5.1.1-1.fc38)...
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools/samtools.spec)  Config(fedora-rawhide-ppc64le)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.1.1
INFO: Mock Version: 5.1.1
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695069238.164412/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695069238.164412/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/beb0de4744e4962ffb82970f219a3113083def0169e600824024dd4ef0391d1c/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/beb0de4744e4962ffb82970f219a3113083def0169e600824024dd4ef0391d1c/merged) with podman image umount
INFO: Package manager dnf detected and used (fallback)
INFO: Bootstrap image not marked ready
Start(bootstrap): installing dnf tooling
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  21 MB/s | 5.4 MB     00:00    
fedora                                           14 MB/s |  67 MB     00:04    
Last metadata expiration check: 0:00:02 ago on Mon Sep 18 20:34:09 2023.
Package python3-dnf-4.16.2-4.fc40.noarch is already installed.
Dependencies resolved.
================================================================================
 Package                      Arch        Version              Repository  Size
================================================================================
Installing:
 python3-dnf-plugins-core     noarch      4.4.2-1.fc39         fedora     293 k
Installing dependencies:
 dbus-libs                    ppc64le     1:1.14.10-1.fc40     fedora     177 k
 python3-dateutil             noarch      1:2.8.2-10.fc39      fedora     355 k
 python3-dbus                 ppc64le     1.3.2-4.fc39         fedora     161 k
 python3-distro               noarch      1.8.0-6.fc39         fedora      49 k
 python3-six                  noarch      1.16.0-12.fc39       fedora      41 k
 python3-systemd              ppc64le     235-5.fc39           fedora     108 k

Transaction Summary
================================================================================
Install  7 Packages

Total download size: 1.2 M
Installed size: 4.8 M
Downloading Packages:
(1/7): python3-dbus-1.3.2-4.fc39.ppc64le.rpm    376 kB/s | 161 kB     00:00    
(2/7): dbus-libs-1.14.10-1.fc40.ppc64le.rpm     402 kB/s | 177 kB     00:00    
(3/7): python3-distro-1.8.0-6.fc39.noarch.rpm   547 kB/s |  49 kB     00:00    
(4/7): python3-dateutil-2.8.2-10.fc39.noarch.rp 661 kB/s | 355 kB     00:00    
(5/7): python3-six-1.16.0-12.fc39.noarch.rpm    473 kB/s |  41 kB     00:00    
(6/7): python3-dnf-plugins-core-4.4.2-1.fc39.no 1.6 MB/s | 293 kB     00:00    
(7/7): python3-systemd-235-5.fc39.ppc64le.rpm   1.1 MB/s | 108 kB     00:00    
--------------------------------------------------------------------------------
Total                                           1.6 MB/s | 1.2 MB     00:00     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
  Installing       : python3-systemd-235-5.fc39.ppc64le                     1/7 
  Installing       : python3-six-1.16.0-12.fc39.noarch                      2/7 
  Installing       : python3-dateutil-1:2.8.2-10.fc39.noarch                3/7 
  Installing       : python3-distro-1.8.0-6.fc39.noarch                     4/7 
  Installing       : dbus-libs-1:1.14.10-1.fc40.ppc64le                     5/7 
  Installing       : python3-dbus-1.3.2-4.fc39.ppc64le                      6/7 
  Installing       : python3-dnf-plugins-core-4.4.2-1.fc39.noarch           7/7 
  Running scriptlet: python3-dnf-plugins-core-4.4.2-1.fc39.noarch           7/7 
  Verifying        : dbus-libs-1:1.14.10-1.fc40.ppc64le                     1/7 
  Verifying        : python3-dateutil-1:2.8.2-10.fc39.noarch                2/7 
  Verifying        : python3-dbus-1.3.2-4.fc39.ppc64le                      3/7 
  Verifying        : python3-distro-1.8.0-6.fc39.noarch                     4/7 
  Verifying        : python3-dnf-plugins-core-4.4.2-1.fc39.noarch           5/7 
  Verifying        : python3-six-1.16.0-12.fc39.noarch                      6/7 
  Verifying        : python3-systemd-235-5.fc39.ppc64le                     7/7 

Installed:
  dbus-libs-1:1.14.10-1.fc40.ppc64le                                            
  python3-dateutil-1:2.8.2-10.fc39.noarch                                       
  python3-dbus-1.3.2-4.fc39.ppc64le                                             
  python3-distro-1.8.0-6.fc39.noarch                                            
  python3-dnf-plugins-core-4.4.2-1.fc39.noarch                                  
  python3-six-1.16.0-12.fc39.noarch                                             
  python3-systemd-235-5.fc39.ppc64le                                            

Complete!
Finish(bootstrap): installing dnf tooling
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf detected and used (direct choice)
Start: installing minimal buildroot with dnf
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  18 kB/s | 1.5 kB     00:00    
Copr repository                                  21 MB/s | 5.4 MB     00:00    
fedora                                           73 kB/s | 6.1 kB     00:00    
Dependencies resolved.
================================================================================
 Package                     Arch    Version                    Repo       Size
================================================================================
Installing group/module packages:
 bash                        ppc64le 5.2.15-5.fc39              fedora    1.9 M
 bzip2                       ppc64le 1.0.8-16.fc39              fedora     53 k
 coreutils                   ppc64le 9.4-1.fc40                 fedora    1.4 M
 cpio                        ppc64le 2.14-4.fc39                fedora    286 k
 diffutils                   ppc64le 3.10-3.fc39                fedora    408 k
 fedora-release-common       noarch  40-0.7                     fedora     18 k
 findutils                   ppc64le 1:4.9.0-6.fc40             fedora    540 k
 gawk                        ppc64le 5.2.2-2.fc39               fedora    1.1 M
 glibc-minimal-langpack      ppc64le 2.38.9000-8.fc40           copr_base  73 k
 grep                        ppc64le 3.11-5.fc40                fedora    308 k
 gzip                        ppc64le 1.12-6.fc39                fedora    170 k
 info                        ppc64le 7.0.3-3.fc39               fedora    200 k
 patch                       ppc64le 2.7.6-22.fc39              fedora    137 k
 redhat-rpm-config           noarch  270-1.fc40                 copr_base  74 k
 rpm-build                   ppc64le 4.18.99-1.fc40             fedora     80 k
 sed                         ppc64le 4.8-14.fc39                fedora    312 k
 shadow-utils                ppc64le 2:4.14.0-1.fc40            fedora    1.3 M
 tar                         ppc64le 2:1.35-2.fc40              fedora    884 k
 unzip                       ppc64le 6.0-62.fc39                fedora    190 k
 util-linux                  ppc64le 2.39.2-1.fc40              copr_base 1.2 M
 which                       ppc64le 2.21-40.fc39               fedora     43 k
 xz                          ppc64le 5.4.4-1.fc39               fedora    559 k
Installing dependencies:
 alternatives                ppc64le 1.25-1.fc39                fedora     41 k
 ansible-srpm-macros         noarch  1-11.fc39                  fedora     21 k
 audit-libs                  ppc64le 3.1.2-4.fc40               fedora    132 k
 authselect                  ppc64le 1.4.2-3.fc39               fedora    145 k
 authselect-libs             ppc64le 1.4.2-3.fc39               fedora    253 k
 basesystem                  noarch  11-18.fc39                 fedora    7.2 k
 binutils                    ppc64le 2.41-5.fc40                fedora    6.4 M
 binutils-gold               ppc64le 2.41-5.fc40                fedora    1.1 M
 bzip2-libs                  ppc64le 1.0.8-16.fc39              fedora     47 k
 ca-certificates             noarch  2023.2.60_v7.0.306-3.fc40  fedora    837 k
 coreutils-common            ppc64le 9.4-1.fc40                 fedora    2.1 M
 cracklib                    ppc64le 2.9.11-2.fc40              copr_base  86 k
 crypto-policies             noarch  20230731-1.git5ed06e0.fc39 fedora     99 k
 curl                        ppc64le 8.3.0-1.fc40               copr_base 357 k
 cyrus-sasl-lib              ppc64le 2.1.28-11.fc40             copr_base 878 k
 debugedit                   ppc64le 5.0-10.fc39                fedora     80 k
 dwz                         ppc64le 0.15-3.fc39                fedora    147 k
 ed                          ppc64le 1.19-4.fc39                fedora     81 k
 efi-srpm-macros             noarch  5-9.fc39                   fedora     22 k
 elfutils                    ppc64le 0.189-6.fc40               copr_base 563 k
 elfutils-debuginfod-client  ppc64le 0.189-6.fc40               copr_base  40 k
 elfutils-default-yama-scope noarch  0.189-6.fc40               copr_base  14 k
 elfutils-libelf             ppc64le 0.189-6.fc40               copr_base 204 k
 elfutils-libs               ppc64le 0.189-6.fc40               copr_base 294 k
 fedora-gpg-keys             noarch  40-0.1                     fedora    130 k
 fedora-release              noarch  40-0.7                     fedora    8.0 k
 fedora-release-identity-basic
                             noarch  40-0.7                     fedora    8.8 k
 fedora-repos                noarch  40-0.1                     fedora    9.4 k
 fedora-repos-rawhide        noarch  40-0.1                     fedora    9.0 k
 file                        ppc64le 5.45-1.fc40                copr_base  50 k
 file-libs                   ppc64le 5.45-1.fc40                copr_base 775 k
 filesystem                  ppc64le 3.18-6.fc39                fedora    1.1 M
 fonts-srpm-macros           noarch  1:2.0.5-12.fc39            fedora     26 k
 forge-srpm-macros           noarch  0.1.0-1.fc40               fedora     18 k
 fpc-srpm-macros             noarch  1.3-8.fc39                 fedora    7.4 k
 gdb-minimal                 ppc64le 13.2-8.fc40                fedora    4.2 M
 gdbm-libs                   ppc64le 1:1.23-4.fc39              fedora     62 k
 ghc-srpm-macros             noarch  1.6.1-2.fc39               fedora    7.8 k
 glibc                       ppc64le 2.38.9000-8.fc40           copr_base 2.2 M
 glibc-common                ppc64le 2.38.9000-8.fc40           copr_base 364 k
 glibc-gconv-extra           ppc64le 2.38.9000-8.fc40           copr_base 2.0 M
 gmp                         ppc64le 1:6.2.1-5.fc39             fedora    304 k
 gnat-srpm-macros            noarch  6-3.fc39                   fedora    8.8 k
 go-srpm-macros              noarch  3.2.0-7.fc40               fedora     27 k
 jansson                     ppc64le 2.13.1-7.fc39              fedora     49 k
 kernel-srpm-macros          noarch  1.0-20.fc39                fedora     10 k
 keyutils-libs               ppc64le 1.6.1-7.fc39               fedora     32 k
 krb5-libs                   ppc64le 1.21.2-1.fc40              fedora    850 k
 libacl                      ppc64le 2.3.1-9.fc40               fedora     26 k
 libarchive                  ppc64le 3.7.2-1.fc40               copr_base 477 k
 libattr                     ppc64le 2.5.1-9.fc40               fedora     19 k
 libblkid                    ppc64le 2.39.2-1.fc40              copr_base 134 k
 libbrotli                   ppc64le 1.1.0-1.fc40               fedora    380 k
 libcap                      ppc64le 2.48-7.fc39                fedora     73 k
 libcap-ng                   ppc64le 0.8.3-8.fc40               fedora     33 k
 libcom_err                  ppc64le 1.47.0-2.fc39              fedora     27 k
 libcurl                     ppc64le 8.3.0-1.fc40               copr_base 380 k
 libdb                       ppc64le 5.3.28-58.fc40             copr_base 831 k
 libeconf                    ppc64le 0.5.2-1.fc40               fedora     34 k
 libevent                    ppc64le 2.1.12-9.fc39              fedora    275 k
 libfdisk                    ppc64le 2.39.2-1.fc40              copr_base 179 k
 libffi                      ppc64le 3.4.4-4.fc39               fedora     38 k
 libgcc                      ppc64le 13.2.1-1.fc39              fedora    104 k
 libgomp                     ppc64le 13.2.1-1.fc39              fedora    332 k
 libidn2                     ppc64le 2.3.4-3.fc39               fedora    121 k
 libmount                    ppc64le 2.39.2-1.fc40              copr_base 177 k
 libnghttp2                  ppc64le 1.56.0-1.fc40              copr_base  85 k
 libnsl2                     ppc64le 2.0.0-6.fc39               fedora     32 k
 libpkgconf                  ppc64le 1.9.5-2.fc39               fedora     42 k
 libpsl                      ppc64le 0.21.2-4.fc39              fedora     65 k
 libpwquality                ppc64le 1.4.5-6.fc39               fedora    123 k
 librtas                     ppc64le 2.0.4-3.fc39               fedora     70 k
 libselinux                  ppc64le 3.5-5.fc39                 fedora    100 k
 libsemanage                 ppc64le 3.5-4.fc39                 fedora    131 k
 libsepol                    ppc64le 3.5-2.fc39                 fedora    356 k
 libsigsegv                  ppc64le 2.14-5.fc39                fedora     28 k
 libsmartcols                ppc64le 2.39.2-1.fc40              copr_base  74 k
 libssh                      ppc64le 0.10.5-2.fc40              copr_base 239 k
 libssh-config               noarch  0.10.5-2.fc40              copr_base 9.6 k
 libstdc++                   ppc64le 13.2.1-1.fc39              fedora    994 k
 libtasn1                    ppc64le 4.19.0-3.fc39              fedora     80 k
 libtirpc                    ppc64le 1.3.3-1.rc2.fc39           fedora    108 k
 libunistring                ppc64le 1.1-5.fc40                 fedora    578 k
 libutempter                 ppc64le 1.2.1-10.fc39              fedora     27 k
 libuuid                     ppc64le 2.39.2-1.fc40              copr_base  30 k
 libverto                    ppc64le 0.3.2-6.fc39               fedora     22 k
 libxcrypt                   ppc64le 4.4.36-2.fc39              fedora    132 k
 libxml2                     ppc64le 2.11.5-1.fc40              copr_base 778 k
 libzstd                     ppc64le 1.5.5-4.fc40               copr_base 336 k
 lua-libs                    ppc64le 5.4.6-3.fc39               fedora    149 k
 lua-srpm-macros             noarch  1-9.fc39                   fedora    8.6 k
 lz4-libs                    ppc64le 1.9.4-4.fc39               fedora     85 k
 mpfr                        ppc64le 4.2.0-3.fc39               fedora    353 k
 ncurses-base                noarch  6.4-7.20230520.fc40        fedora     88 k
 ncurses-libs                ppc64le 6.4-7.20230520.fc40        fedora    380 k
 ocaml-srpm-macros           noarch  8-2.fc39                   fedora     14 k
 openblas-srpm-macros        noarch  2-14.fc39                  fedora    7.5 k
 openldap                    ppc64le 2.6.6-1.fc39               fedora    287 k
 openssl-libs                ppc64le 1:3.1.1-4.fc40             copr_base 2.3 M
 p11-kit                     ppc64le 0.25.0-2.fc39              fedora    500 k
 p11-kit-trust               ppc64le 0.25.0-2.fc39              fedora    156 k
 package-notes-srpm-macros   noarch  0.5-9.fc39                 fedora     11 k
 pam                         ppc64le 1.5.3-2.fc39               fedora    592 k
 pam-libs                    ppc64le 1.5.3-2.fc39               fedora     64 k
 pcre2                       ppc64le 10.42-1.fc39.2             fedora    241 k
 pcre2-syntax                noarch  10.42-1.fc39.2             fedora    143 k
 perl-srpm-macros            noarch  1-51.fc39                  fedora    8.0 k
 pkgconf                     ppc64le 1.9.5-2.fc39               fedora     43 k
 pkgconf-m4                  noarch  1.9.5-2.fc39               fedora     14 k
 pkgconf-pkg-config          ppc64le 1.9.5-2.fc39               fedora    9.6 k
 popt                        ppc64le 1.19-3.fc39                fedora     71 k
 publicsuffix-list-dafsa     noarch  20230812-1.fc40            fedora     57 k
 pyproject-srpm-macros       noarch  1.9.0-2.fc39               fedora     14 k
 python-srpm-macros          noarch  3.12-4.fc40                fedora     25 k
 qt5-srpm-macros             noarch  5.15.10-2.fc39             fedora    8.3 k
 qt6-srpm-macros             noarch  6.5.2-2.fc39               fedora    9.2 k
 readline                    ppc64le 8.2-4.fc39                 fedora    229 k
 rpm                         ppc64le 4.18.99-1.fc40             fedora    537 k
 rpm-build-libs              ppc64le 4.18.99-1.fc40             fedora    103 k
 rpm-libs                    ppc64le 4.18.99-1.fc40             fedora    356 k
 rpm-sequoia                 ppc64le 1.5.0-1.fc40               fedora    1.7 M
 rust-srpm-macros            noarch  24-5.fc40                  fedora     12 k
 setup                       noarch  2.14.4-1.fc39              fedora    154 k
 sqlite-libs                 ppc64le 3.43.1-1.fc40              fedora    798 k
 systemd-libs                ppc64le 254.1-2.fc40               fedora    733 k
 tzdata                      noarch  2023c-3.fc40               fedora    718 k
 util-linux-core             ppc64le 2.39.2-1.fc40              copr_base 520 k
 xxhash-libs                 ppc64le 0.8.2-1.fc39               fedora     37 k
 xz-libs                     ppc64le 5.4.4-1.fc39               fedora    121 k
 zip                         ppc64le 3.0-38.fc39                fedora    274 k
 zlib-ng-compat              ppc64le 2.1.3-3.fc40               copr_base  83 k
 zstd                        ppc64le 1.5.5-4.fc40               copr_base 500 k
Installing Groups:
 Buildsystem building group                                                    

Transaction Summary
================================================================================
Install  154 Packages

Total size: 57 M
Installed size: 327 M
Downloading Packages:
[SKIPPED] cracklib-2.9.11-2.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] curl-8.3.0-1.fc40.ppc64le.rpm: Already downloaded                    
[SKIPPED] cyrus-sasl-lib-2.1.28-11.fc40.ppc64le.rpm: Already downloaded        
[SKIPPED] elfutils-0.189-6.fc40.ppc64le.rpm: Already downloaded                
[SKIPPED] elfutils-debuginfod-client-0.189-6.fc40.ppc64le.rpm: Already downloaded
[SKIPPED] elfutils-default-yama-scope-0.189-6.fc40.noarch.rpm: Already downloaded
[SKIPPED] elfutils-libelf-0.189-6.fc40.ppc64le.rpm: Already downloaded         
[SKIPPED] elfutils-libs-0.189-6.fc40.ppc64le.rpm: Already downloaded           
[SKIPPED] file-5.45-1.fc40.ppc64le.rpm: Already downloaded                     
[SKIPPED] file-libs-5.45-1.fc40.ppc64le.rpm: Already downloaded                
[SKIPPED] glibc-2.38.9000-8.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] glibc-common-2.38.9000-8.fc40.ppc64le.rpm: Already downloaded        
[SKIPPED] glibc-gconv-extra-2.38.9000-8.fc40.ppc64le.rpm: Already downloaded   
[SKIPPED] glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le.rpm: Already downloaded
[SKIPPED] libarchive-3.7.2-1.fc40.ppc64le.rpm: Already downloaded              
[SKIPPED] libblkid-2.39.2-1.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] libcurl-8.3.0-1.fc40.ppc64le.rpm: Already downloaded                 
[SKIPPED] libdb-5.3.28-58.fc40.ppc64le.rpm: Already downloaded                 
[SKIPPED] libfdisk-2.39.2-1.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] libmount-2.39.2-1.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] libnghttp2-1.56.0-1.fc40.ppc64le.rpm: Already downloaded             
[SKIPPED] libsmartcols-2.39.2-1.fc40.ppc64le.rpm: Already downloaded           
[SKIPPED] libssh-0.10.5-2.fc40.ppc64le.rpm: Already downloaded                 
[SKIPPED] libssh-config-0.10.5-2.fc40.noarch.rpm: Already downloaded           
[SKIPPED] libuuid-2.39.2-1.fc40.ppc64le.rpm: Already downloaded                
[SKIPPED] libxml2-2.11.5-1.fc40.ppc64le.rpm: Already downloaded                
[SKIPPED] libzstd-1.5.5-4.fc40.ppc64le.rpm: Already downloaded                 
[SKIPPED] openssl-libs-3.1.1-4.fc40.ppc64le.rpm: Already downloaded            
[SKIPPED] redhat-rpm-config-270-1.fc40.noarch.rpm: Already downloaded          
[SKIPPED] util-linux-2.39.2-1.fc40.ppc64le.rpm: Already downloaded             
[SKIPPED] util-linux-core-2.39.2-1.fc40.ppc64le.rpm: Already downloaded        
[SKIPPED] zlib-ng-compat-2.1.3-3.fc40.ppc64le.rpm: Already downloaded          
[SKIPPED] zstd-1.5.5-4.fc40.ppc64le.rpm: Already downloaded                    
[SKIPPED] alternatives-1.25-1.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] ansible-srpm-macros-1-11.fc39.noarch.rpm: Already downloaded         
[SKIPPED] audit-libs-3.1.2-4.fc40.ppc64le.rpm: Already downloaded              
[SKIPPED] authselect-1.4.2-3.fc39.ppc64le.rpm: Already downloaded              
[SKIPPED] authselect-libs-1.4.2-3.fc39.ppc64le.rpm: Already downloaded         
[SKIPPED] basesystem-11-18.fc39.noarch.rpm: Already downloaded                 
[SKIPPED] bash-5.2.15-5.fc39.ppc64le.rpm: Already downloaded                   
[SKIPPED] binutils-2.41-5.fc40.ppc64le.rpm: Already downloaded                 
[SKIPPED] binutils-gold-2.41-5.fc40.ppc64le.rpm: Already downloaded            
[SKIPPED] bzip2-1.0.8-16.fc39.ppc64le.rpm: Already downloaded                  
[SKIPPED] bzip2-libs-1.0.8-16.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch.rpm: Already downloaded
[SKIPPED] coreutils-9.4-1.fc40.ppc64le.rpm: Already downloaded                 
[SKIPPED] coreutils-common-9.4-1.fc40.ppc64le.rpm: Already downloaded          
[SKIPPED] cpio-2.14-4.fc39.ppc64le.rpm: Already downloaded                     
[SKIPPED] crypto-policies-20230731-1.git5ed06e0.fc39.noarch.rpm: Already downloaded
[SKIPPED] debugedit-5.0-10.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] diffutils-3.10-3.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] dwz-0.15-3.fc39.ppc64le.rpm: Already downloaded                      
[SKIPPED] ed-1.19-4.fc39.ppc64le.rpm: Already downloaded                       
[SKIPPED] efi-srpm-macros-5-9.fc39.noarch.rpm: Already downloaded              
[SKIPPED] fedora-gpg-keys-40-0.1.noarch.rpm: Already downloaded                
[SKIPPED] fedora-release-40-0.7.noarch.rpm: Already downloaded                 
[SKIPPED] fedora-release-common-40-0.7.noarch.rpm: Already downloaded          
[SKIPPED] fedora-release-identity-basic-40-0.7.noarch.rpm: Already downloaded  
[SKIPPED] fedora-repos-40-0.1.noarch.rpm: Already downloaded                   
[SKIPPED] fedora-repos-rawhide-40-0.1.noarch.rpm: Already downloaded           
[SKIPPED] filesystem-3.18-6.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] findutils-4.9.0-6.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] fonts-srpm-macros-2.0.5-12.fc39.noarch.rpm: Already downloaded       
[SKIPPED] forge-srpm-macros-0.1.0-1.fc40.noarch.rpm: Already downloaded        
[SKIPPED] fpc-srpm-macros-1.3-8.fc39.noarch.rpm: Already downloaded            
[SKIPPED] gawk-5.2.2-2.fc39.ppc64le.rpm: Already downloaded                    
[SKIPPED] gdb-minimal-13.2-8.fc40.ppc64le.rpm: Already downloaded              
[SKIPPED] gdbm-libs-1.23-4.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] ghc-srpm-macros-1.6.1-2.fc39.noarch.rpm: Already downloaded          
[SKIPPED] gmp-6.2.1-5.fc39.ppc64le.rpm: Already downloaded                     
[SKIPPED] gnat-srpm-macros-6-3.fc39.noarch.rpm: Already downloaded             
[SKIPPED] go-srpm-macros-3.2.0-7.fc40.noarch.rpm: Already downloaded           
[SKIPPED] grep-3.11-5.fc40.ppc64le.rpm: Already downloaded                     
[SKIPPED] gzip-1.12-6.fc39.ppc64le.rpm: Already downloaded                     
[SKIPPED] info-7.0.3-3.fc39.ppc64le.rpm: Already downloaded                    
[SKIPPED] jansson-2.13.1-7.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] kernel-srpm-macros-1.0-20.fc39.noarch.rpm: Already downloaded        
[SKIPPED] keyutils-libs-1.6.1-7.fc39.ppc64le.rpm: Already downloaded           
[SKIPPED] krb5-libs-1.21.2-1.fc40.ppc64le.rpm: Already downloaded              
[SKIPPED] libacl-2.3.1-9.fc40.ppc64le.rpm: Already downloaded                  
[SKIPPED] libattr-2.5.1-9.fc40.ppc64le.rpm: Already downloaded                 
[SKIPPED] libbrotli-1.1.0-1.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] libcap-2.48-7.fc39.ppc64le.rpm: Already downloaded                   
[SKIPPED] libcap-ng-0.8.3-8.fc40.ppc64le.rpm: Already downloaded               
[SKIPPED] libcom_err-1.47.0-2.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] libeconf-0.5.2-1.fc40.ppc64le.rpm: Already downloaded                
[SKIPPED] libevent-2.1.12-9.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] libffi-3.4.4-4.fc39.ppc64le.rpm: Already downloaded                  
[SKIPPED] libgcc-13.2.1-1.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] libgomp-13.2.1-1.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] libidn2-2.3.4-3.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] libnsl2-2.0.0-6.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] libpkgconf-1.9.5-2.fc39.ppc64le.rpm: Already downloaded              
[SKIPPED] libpsl-0.21.2-4.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] libpwquality-1.4.5-6.fc39.ppc64le.rpm: Already downloaded            
[SKIPPED] librtas-2.0.4-3.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] libselinux-3.5-5.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] libsemanage-3.5-4.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] libsepol-3.5-2.fc39.ppc64le.rpm: Already downloaded                  
[SKIPPED] libsigsegv-2.14-5.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] libstdc++-13.2.1-1.fc39.ppc64le.rpm: Already downloaded              
[SKIPPED] libtasn1-4.19.0-3.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] libtirpc-1.3.3-1.rc2.fc39.ppc64le.rpm: Already downloaded            
[SKIPPED] libunistring-1.1-5.fc40.ppc64le.rpm: Already downloaded              
[SKIPPED] libutempter-1.2.1-10.fc39.ppc64le.rpm: Already downloaded            
[SKIPPED] libverto-0.3.2-6.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] libxcrypt-4.4.36-2.fc39.ppc64le.rpm: Already downloaded              
[SKIPPED] lua-libs-5.4.6-3.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] lua-srpm-macros-1-9.fc39.noarch.rpm: Already downloaded              
[SKIPPED] lz4-libs-1.9.4-4.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] mpfr-4.2.0-3.fc39.ppc64le.rpm: Already downloaded                    
[SKIPPED] ncurses-base-6.4-7.20230520.fc40.noarch.rpm: Already downloaded      
[SKIPPED] ncurses-libs-6.4-7.20230520.fc40.ppc64le.rpm: Already downloaded     
[SKIPPED] ocaml-srpm-macros-8-2.fc39.noarch.rpm: Already downloaded            
[SKIPPED] openblas-srpm-macros-2-14.fc39.noarch.rpm: Already downloaded        
[SKIPPED] openldap-2.6.6-1.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] p11-kit-0.25.0-2.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] p11-kit-trust-0.25.0-2.fc39.ppc64le.rpm: Already downloaded          
[SKIPPED] package-notes-srpm-macros-0.5-9.fc39.noarch.rpm: Already downloaded  
[SKIPPED] pam-1.5.3-2.fc39.ppc64le.rpm: Already downloaded                     
[SKIPPED] pam-libs-1.5.3-2.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] patch-2.7.6-22.fc39.ppc64le.rpm: Already downloaded                  
[SKIPPED] pcre2-10.42-1.fc39.2.ppc64le.rpm: Already downloaded                 
[SKIPPED] pcre2-syntax-10.42-1.fc39.2.noarch.rpm: Already downloaded           
[SKIPPED] perl-srpm-macros-1-51.fc39.noarch.rpm: Already downloaded            
[SKIPPED] pkgconf-1.9.5-2.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] pkgconf-m4-1.9.5-2.fc39.noarch.rpm: Already downloaded               
[SKIPPED] pkgconf-pkg-config-1.9.5-2.fc39.ppc64le.rpm: Already downloaded      
[SKIPPED] popt-1.19-3.fc39.ppc64le.rpm: Already downloaded                     
[SKIPPED] publicsuffix-list-dafsa-20230812-1.fc40.noarch.rpm: Already downloaded
[SKIPPED] pyproject-srpm-macros-1.9.0-2.fc39.noarch.rpm: Already downloaded    
[SKIPPED] python-srpm-macros-3.12-4.fc40.noarch.rpm: Already downloaded        
[SKIPPED] qt5-srpm-macros-5.15.10-2.fc39.noarch.rpm: Already downloaded        
[SKIPPED] qt6-srpm-macros-6.5.2-2.fc39.noarch.rpm: Already downloaded          
[SKIPPED] readline-8.2-4.fc39.ppc64le.rpm: Already downloaded                  
[SKIPPED] rpm-4.18.99-1.fc40.ppc64le.rpm: Already downloaded                   
[SKIPPED] rpm-build-4.18.99-1.fc40.ppc64le.rpm: Already downloaded             
[SKIPPED] rpm-build-libs-4.18.99-1.fc40.ppc64le.rpm: Already downloaded        
[SKIPPED] rpm-libs-4.18.99-1.fc40.ppc64le.rpm: Already downloaded              
[SKIPPED] rpm-sequoia-1.5.0-1.fc40.ppc64le.rpm: Already downloaded             
[SKIPPED] rust-srpm-macros-24-5.fc40.noarch.rpm: Already downloaded            
[SKIPPED] sed-4.8-14.fc39.ppc64le.rpm: Already downloaded                      
[SKIPPED] setup-2.14.4-1.fc39.noarch.rpm: Already downloaded                   
[SKIPPED] shadow-utils-4.14.0-1.fc40.ppc64le.rpm: Already downloaded           
[SKIPPED] sqlite-libs-3.43.1-1.fc40.ppc64le.rpm: Already downloaded            
[SKIPPED] systemd-libs-254.1-2.fc40.ppc64le.rpm: Already downloaded            
[SKIPPED] tar-1.35-2.fc40.ppc64le.rpm: Already downloaded                      
[SKIPPED] tzdata-2023c-3.fc40.noarch.rpm: Already downloaded                   
[SKIPPED] unzip-6.0-62.fc39.ppc64le.rpm: Already downloaded                    
[SKIPPED] which-2.21-40.fc39.ppc64le.rpm: Already downloaded                   
[SKIPPED] xxhash-libs-0.8.2-1.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] xz-5.4.4-1.fc39.ppc64le.rpm: Already downloaded                      
[SKIPPED] xz-libs-5.4.4-1.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] zip-3.0-38.fc39.ppc64le.rpm: Already downloaded                      
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0xA15B79CC:
 Userid     : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
 Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
Key imported successfully
fedora                                          1.6 MB/s | 1.6 kB     00:00    
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0x18B8E74C:
 Userid     : "Fedora (39) <fedora-39-primary@fedoraproject.org>"
 Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Running scriptlet: filesystem-3.18-6.fc39.ppc64le                         1/1 
  Preparing        :                                                        1/1 
  Installing       : libgcc-13.2.1-1.fc39.ppc64le                         1/154 
  Running scriptlet: libgcc-13.2.1-1.fc39.ppc64le                         1/154 
  Installing       : crypto-policies-20230731-1.git5ed06e0.fc39.noarc     2/154 
  Running scriptlet: crypto-policies-20230731-1.git5ed06e0.fc39.noarc     2/154 
  Installing       : tzdata-2023c-3.fc40.noarch                           3/154 
  Installing       : fedora-release-identity-basic-40-0.7.noarch          4/154 
  Installing       : fedora-repos-rawhide-40-0.1.noarch                   5/154 
  Installing       : fedora-gpg-keys-40-0.1.noarch                        6/154 
  Installing       : fedora-repos-40-0.1.noarch                           7/154 
  Installing       : fedora-release-common-40-0.7.noarch                  8/154 
  Installing       : fedora-release-40-0.7.noarch                         9/154 
  Installing       : setup-2.14.4-1.fc39.noarch                          10/154 
warning: /etc/hosts created as /etc/hosts.rpmnew

  Running scriptlet: setup-2.14.4-1.fc39.noarch                          10/154 
  Installing       : filesystem-3.18-6.fc39.ppc64le                      11/154 
  Installing       : basesystem-11-18.fc39.noarch                        12/154 
  Installing       : rust-srpm-macros-24-5.fc40.noarch                   13/154 
  Installing       : qt6-srpm-macros-6.5.2-2.fc39.noarch                 14/154 
  Installing       : qt5-srpm-macros-5.15.10-2.fc39.noarch               15/154 
  Installing       : pyproject-srpm-macros-1.9.0-2.fc39.noarch           16/154 
  Installing       : publicsuffix-list-dafsa-20230812-1.fc40.noarch      17/154 
  Installing       : pkgconf-m4-1.9.5-2.fc39.noarch                      18/154 
  Installing       : perl-srpm-macros-1-51.fc39.noarch                   19/154 
  Installing       : pcre2-syntax-10.42-1.fc39.2.noarch                  20/154 
  Installing       : package-notes-srpm-macros-0.5-9.fc39.noarch         21/154 
  Installing       : openblas-srpm-macros-2-14.fc39.noarch               22/154 
  Installing       : ocaml-srpm-macros-8-2.fc39.noarch                   23/154 
  Installing       : ncurses-base-6.4-7.20230520.fc40.noarch             24/154 
  Installing       : glibc-gconv-extra-2.38.9000-8.fc40.ppc64le          25/154 
  Running scriptlet: glibc-gconv-extra-2.38.9000-8.fc40.ppc64le          25/154 
  Installing       : glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le     26/154 
  Installing       : glibc-common-2.38.9000-8.fc40.ppc64le               27/154 
  Running scriptlet: glibc-2.38.9000-8.fc40.ppc64le                      28/154 
  Installing       : glibc-2.38.9000-8.fc40.ppc64le                      28/154 
  Running scriptlet: glibc-2.38.9000-8.fc40.ppc64le                      28/154 
  Installing       : ncurses-libs-6.4-7.20230520.fc40.ppc64le            29/154 
  Installing       : bash-5.2.15-5.fc39.ppc64le                          30/154 
  Running scriptlet: bash-5.2.15-5.fc39.ppc64le                          30/154 
  Installing       : zlib-ng-compat-2.1.3-3.fc40.ppc64le                 31/154 
  Installing       : xz-libs-5.4.4-1.fc39.ppc64le                        32/154 
  Installing       : bzip2-libs-1.0.8-16.fc39.ppc64le                    33/154 
  Installing       : libuuid-2.39.2-1.fc40.ppc64le                       34/154 
  Installing       : libzstd-1.5.5-4.fc40.ppc64le                        35/154 
  Installing       : elfutils-libelf-0.189-6.fc40.ppc64le                36/154 
  Installing       : libstdc++-13.2.1-1.fc39.ppc64le                     37/154 
  Installing       : popt-1.19-3.fc39.ppc64le                            38/154 
  Installing       : libblkid-2.39.2-1.fc40.ppc64le                      39/154 
  Installing       : readline-8.2-4.fc39.ppc64le                         40/154 
  Installing       : gmp-1:6.2.1-5.fc39.ppc64le                          41/154 
  Installing       : libattr-2.5.1-9.fc40.ppc64le                        42/154 
  Installing       : libacl-2.3.1-9.fc40.ppc64le                         43/154 
  Installing       : libcap-2.48-7.fc39.ppc64le                          44/154 
  Installing       : libxcrypt-4.4.36-2.fc39.ppc64le                     45/154 
  Installing       : lz4-libs-1.9.4-4.fc39.ppc64le                       46/154 
  Installing       : systemd-libs-254.1-2.fc40.ppc64le                   47/154 
  Installing       : mpfr-4.2.0-3.fc39.ppc64le                           48/154 
  Installing       : dwz-0.15-3.fc39.ppc64le                             49/154 
  Installing       : unzip-6.0-62.fc39.ppc64le                           50/154 
  Installing       : file-libs-5.45-1.fc40.ppc64le                       51/154 
  Installing       : file-5.45-1.fc40.ppc64le                            52/154 
  Installing       : libsmartcols-2.39.2-1.fc40.ppc64le                  53/154 
  Installing       : alternatives-1.25-1.fc39.ppc64le                    54/154 
  Installing       : jansson-2.13.1-7.fc39.ppc64le                       55/154 
  Installing       : libcap-ng-0.8.3-8.fc40.ppc64le                      56/154 
  Installing       : audit-libs-3.1.2-4.fc40.ppc64le                     57/154 
  Installing       : pam-libs-1.5.3-2.fc39.ppc64le                       58/154 
  Installing       : libcom_err-1.47.0-2.fc39.ppc64le                    59/154 
  Installing       : libsepol-3.5-2.fc39.ppc64le                         60/154 
  Installing       : libunistring-1.1-5.fc40.ppc64le                     61/154 
  Installing       : libidn2-2.3.4-3.fc39.ppc64le                        62/154 
  Installing       : lua-libs-5.4.6-3.fc39.ppc64le                       63/154 
  Installing       : pcre2-10.42-1.fc39.2.ppc64le                        64/154 
  Installing       : libselinux-3.5-5.fc39.ppc64le                       65/154 
  Installing       : sed-4.8-14.fc39.ppc64le                             66/154 
  Installing       : grep-3.11-5.fc40.ppc64le                            67/154 
  Installing       : findutils-1:4.9.0-6.fc40.ppc64le                    68/154 
  Installing       : xz-5.4.4-1.fc39.ppc64le                             69/154 
  Installing       : libmount-2.39.2-1.fc40.ppc64le                      70/154 
  Installing       : util-linux-core-2.39.2-1.fc40.ppc64le               71/154 
  Installing       : libsemanage-3.5-4.fc39.ppc64le                      72/154 
  Installing       : tar-2:1.35-2.fc40.ppc64le                           73/154 
  Installing       : libpsl-0.21.2-4.fc39.ppc64le                        74/154 
  Installing       : zip-3.0-38.fc39.ppc64le                             75/154 
  Installing       : zstd-1.5.5-4.fc40.ppc64le                           76/154 
  Installing       : libfdisk-2.39.2-1.fc40.ppc64le                      77/154 
  Installing       : bzip2-1.0.8-16.fc39.ppc64le                         78/154 
  Installing       : libxml2-2.11.5-1.fc40.ppc64le                       79/154 
  Installing       : sqlite-libs-3.43.1-1.fc40.ppc64le                   80/154 
  Installing       : elfutils-default-yama-scope-0.189-6.fc40.noarch     81/154 
  Running scriptlet: elfutils-default-yama-scope-0.189-6.fc40.noarch     81/154 
  Installing       : ed-1.19-4.fc39.ppc64le                              82/154 
  Installing       : patch-2.7.6-22.fc39.ppc64le                         83/154 
  Installing       : libdb-5.3.28-58.fc40.ppc64le                        84/154 
  Installing       : libnghttp2-1.56.0-1.fc40.ppc64le                    85/154 
  Installing       : cpio-2.14-4.fc39.ppc64le                            86/154 
  Installing       : diffutils-3.10-3.fc39.ppc64le                       87/154 
  Installing       : gdbm-libs-1:1.23-4.fc39.ppc64le                     88/154 
  Installing       : cyrus-sasl-lib-2.1.28-11.fc40.ppc64le               89/154 
  Installing       : keyutils-libs-1.6.1-7.fc39.ppc64le                  90/154 
  Installing       : libbrotli-1.1.0-1.fc40.ppc64le                      91/154 
  Installing       : libeconf-0.5.2-1.fc40.ppc64le                       92/154 
  Installing       : shadow-utils-2:4.14.0-1.fc40.ppc64le                93/154 
  Running scriptlet: libutempter-1.2.1-10.fc39.ppc64le                   94/154 
  Installing       : libutempter-1.2.1-10.fc39.ppc64le                   94/154 
  Installing       : libffi-3.4.4-4.fc39.ppc64le                         95/154 
  Installing       : p11-kit-0.25.0-2.fc39.ppc64le                       96/154 
  Installing       : libgomp-13.2.1-1.fc39.ppc64le                       97/154 
  Installing       : libpkgconf-1.9.5-2.fc39.ppc64le                     98/154 
  Installing       : pkgconf-1.9.5-2.fc39.ppc64le                        99/154 
  Installing       : pkgconf-pkg-config-1.9.5-2.fc39.ppc64le            100/154 
  Installing       : librtas-2.0.4-3.fc39.ppc64le                       101/154 
  Running scriptlet: librtas-2.0.4-3.fc39.ppc64le                       101/154 
  Installing       : libsigsegv-2.14-5.fc39.ppc64le                     102/154 
  Installing       : gawk-5.2.2-2.fc39.ppc64le                          103/154 
  Installing       : libtasn1-4.19.0-3.fc39.ppc64le                     104/154 
  Installing       : p11-kit-trust-0.25.0-2.fc39.ppc64le                105/154 
  Running scriptlet: p11-kit-trust-0.25.0-2.fc39.ppc64le                105/154 
  Installing       : libverto-0.3.2-6.fc39.ppc64le                      106/154 
  Installing       : xxhash-libs-0.8.2-1.fc39.ppc64le                   107/154 
  Installing       : kernel-srpm-macros-1.0-20.fc39.noarch              108/154 
  Installing       : gnat-srpm-macros-6-3.fc39.noarch                   109/154 
  Installing       : ghc-srpm-macros-1.6.1-2.fc39.noarch                110/154 
  Installing       : fpc-srpm-macros-1.3-8.fc39.noarch                  111/154 
  Installing       : coreutils-common-9.4-1.fc40.ppc64le                112/154 
  Installing       : openssl-libs-1:3.1.1-4.fc40.ppc64le                113/154 
  Installing       : coreutils-9.4-1.fc40.ppc64le                       114/154 
  Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch   115/154 
  Installing       : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch   115/154 
  Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch   115/154 
  Installing       : krb5-libs-1.21.2-1.fc40.ppc64le                    116/154 
  Installing       : libtirpc-1.3.3-1.rc2.fc39.ppc64le                  117/154 
  Running scriptlet: authselect-libs-1.4.2-3.fc39.ppc64le               118/154 
  Installing       : authselect-libs-1.4.2-3.fc39.ppc64le               118/154 
  Installing       : gzip-1.12-6.fc39.ppc64le                           119/154 
  Installing       : cracklib-2.9.11-2.fc40.ppc64le                     120/154 
  Installing       : libpwquality-1.4.5-6.fc39.ppc64le                  121/154 
  Installing       : authselect-1.4.2-3.fc39.ppc64le                    122/154 
  Installing       : libnsl2-2.0.0-6.fc39.ppc64le                       123/154 
  Installing       : pam-1.5.3-2.fc39.ppc64le                           124/154 
  Installing       : libarchive-3.7.2-1.fc40.ppc64le                    125/154 
  Installing       : libevent-2.1.12-9.fc39.ppc64le                     126/154 
  Installing       : openldap-2.6.6-1.fc39.ppc64le                      127/154 
  Installing       : rpm-sequoia-1.5.0-1.fc40.ppc64le                   128/154 
  Installing       : rpm-libs-4.18.99-1.fc40.ppc64le                    129/154 
  Installing       : ansible-srpm-macros-1-11.fc39.noarch               130/154 
  Installing       : libssh-config-0.10.5-2.fc40.noarch                 131/154 
  Installing       : libssh-0.10.5-2.fc40.ppc64le                       132/154 
  Installing       : libcurl-8.3.0-1.fc40.ppc64le                       133/154 
  Installing       : elfutils-libs-0.189-6.fc40.ppc64le                 134/154 
  Installing       : elfutils-debuginfod-client-0.189-6.fc40.ppc64le    135/154 
  Installing       : binutils-gold-2.41-5.fc40.ppc64le                  136/154 
  Running scriptlet: binutils-gold-2.41-5.fc40.ppc64le                  136/154 
  Installing       : binutils-2.41-5.fc40.ppc64le                       137/154 
  Running scriptlet: binutils-2.41-5.fc40.ppc64le                       137/154 
  Installing       : elfutils-0.189-6.fc40.ppc64le                      138/154 
  Installing       : gdb-minimal-13.2-8.fc40.ppc64le                    139/154 
  Installing       : debugedit-5.0-10.fc39.ppc64le                      140/154 
  Installing       : rpm-build-libs-4.18.99-1.fc40.ppc64le              141/154 
  Installing       : curl-8.3.0-1.fc40.ppc64le                          142/154 
  Running scriptlet: rpm-4.18.99-1.fc40.ppc64le                         143/154 
  Installing       : rpm-4.18.99-1.fc40.ppc64le                         143/154 
  Installing       : efi-srpm-macros-5-9.fc39.noarch                    144/154 
  Installing       : lua-srpm-macros-1-9.fc39.noarch                    145/154 
  Installing       : fonts-srpm-macros-1:2.0.5-12.fc39.noarch           146/154 
  Installing       : forge-srpm-macros-0.1.0-1.fc40.noarch              147/154 
  Installing       : go-srpm-macros-3.2.0-7.fc40.noarch                 148/154 
  Installing       : python-srpm-macros-3.12-4.fc40.noarch              149/154 
  Installing       : redhat-rpm-config-270-1.fc40.noarch                150/154 
  Installing       : rpm-build-4.18.99-1.fc40.ppc64le                   151/154 
  Installing       : util-linux-2.39.2-1.fc40.ppc64le                   152/154 
  Installing       : which-2.21-40.fc39.ppc64le                         153/154 
  Installing       : info-7.0.3-3.fc39.ppc64le                          154/154 
  Running scriptlet: filesystem-3.18-6.fc39.ppc64le                     154/154 
  Running scriptlet: ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch   154/154 
  Running scriptlet: authselect-libs-1.4.2-3.fc39.ppc64le               154/154 
  Running scriptlet: rpm-4.18.99-1.fc40.ppc64le                         154/154 
  Running scriptlet: info-7.0.3-3.fc39.ppc64le                          154/154 
  Verifying        : cracklib-2.9.11-2.fc40.ppc64le                       1/154 
  Verifying        : curl-8.3.0-1.fc40.ppc64le                            2/154 
  Verifying        : cyrus-sasl-lib-2.1.28-11.fc40.ppc64le                3/154 
  Verifying        : elfutils-0.189-6.fc40.ppc64le                        4/154 
  Verifying        : elfutils-debuginfod-client-0.189-6.fc40.ppc64le      5/154 
  Verifying        : elfutils-default-yama-scope-0.189-6.fc40.noarch      6/154 
  Verifying        : elfutils-libelf-0.189-6.fc40.ppc64le                 7/154 
  Verifying        : elfutils-libs-0.189-6.fc40.ppc64le                   8/154 
  Verifying        : file-5.45-1.fc40.ppc64le                             9/154 
  Verifying        : file-libs-5.45-1.fc40.ppc64le                       10/154 
  Verifying        : glibc-2.38.9000-8.fc40.ppc64le                      11/154 
  Verifying        : glibc-common-2.38.9000-8.fc40.ppc64le               12/154 
  Verifying        : glibc-gconv-extra-2.38.9000-8.fc40.ppc64le          13/154 
  Verifying        : glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le     14/154 
  Verifying        : libarchive-3.7.2-1.fc40.ppc64le                     15/154 
  Verifying        : libblkid-2.39.2-1.fc40.ppc64le                      16/154 
  Verifying        : libcurl-8.3.0-1.fc40.ppc64le                        17/154 
  Verifying        : libdb-5.3.28-58.fc40.ppc64le                        18/154 
  Verifying        : libfdisk-2.39.2-1.fc40.ppc64le                      19/154 
  Verifying        : libmount-2.39.2-1.fc40.ppc64le                      20/154 
  Verifying        : libnghttp2-1.56.0-1.fc40.ppc64le                    21/154 
  Verifying        : libsmartcols-2.39.2-1.fc40.ppc64le                  22/154 
  Verifying        : libssh-0.10.5-2.fc40.ppc64le                        23/154 
  Verifying        : libssh-config-0.10.5-2.fc40.noarch                  24/154 
  Verifying        : libuuid-2.39.2-1.fc40.ppc64le                       25/154 
  Verifying        : libxml2-2.11.5-1.fc40.ppc64le                       26/154 
  Verifying        : libzstd-1.5.5-4.fc40.ppc64le                        27/154 
  Verifying        : openssl-libs-1:3.1.1-4.fc40.ppc64le                 28/154 
  Verifying        : redhat-rpm-config-270-1.fc40.noarch                 29/154 
  Verifying        : util-linux-2.39.2-1.fc40.ppc64le                    30/154 
  Verifying        : util-linux-core-2.39.2-1.fc40.ppc64le               31/154 
  Verifying        : zlib-ng-compat-2.1.3-3.fc40.ppc64le                 32/154 
  Verifying        : zstd-1.5.5-4.fc40.ppc64le                           33/154 
  Verifying        : alternatives-1.25-1.fc39.ppc64le                    34/154 
  Verifying        : ansible-srpm-macros-1-11.fc39.noarch                35/154 
  Verifying        : audit-libs-3.1.2-4.fc40.ppc64le                     36/154 
  Verifying        : authselect-1.4.2-3.fc39.ppc64le                     37/154 
  Verifying        : authselect-libs-1.4.2-3.fc39.ppc64le                38/154 
  Verifying        : basesystem-11-18.fc39.noarch                        39/154 
  Verifying        : bash-5.2.15-5.fc39.ppc64le                          40/154 
  Verifying        : binutils-2.41-5.fc40.ppc64le                        41/154 
  Verifying        : binutils-gold-2.41-5.fc40.ppc64le                   42/154 
  Verifying        : bzip2-1.0.8-16.fc39.ppc64le                         43/154 
  Verifying        : bzip2-libs-1.0.8-16.fc39.ppc64le                    44/154 
  Verifying        : ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch    45/154 
  Verifying        : coreutils-9.4-1.fc40.ppc64le                        46/154 
  Verifying        : coreutils-common-9.4-1.fc40.ppc64le                 47/154 
  Verifying        : cpio-2.14-4.fc39.ppc64le                            48/154 
  Verifying        : crypto-policies-20230731-1.git5ed06e0.fc39.noarc    49/154 
  Verifying        : debugedit-5.0-10.fc39.ppc64le                       50/154 
  Verifying        : diffutils-3.10-3.fc39.ppc64le                       51/154 
  Verifying        : dwz-0.15-3.fc39.ppc64le                             52/154 
  Verifying        : ed-1.19-4.fc39.ppc64le                              53/154 
  Verifying        : efi-srpm-macros-5-9.fc39.noarch                     54/154 
  Verifying        : fedora-gpg-keys-40-0.1.noarch                       55/154 
  Verifying        : fedora-release-40-0.7.noarch                        56/154 
  Verifying        : fedora-release-common-40-0.7.noarch                 57/154 
  Verifying        : fedora-release-identity-basic-40-0.7.noarch         58/154 
  Verifying        : fedora-repos-40-0.1.noarch                          59/154 
  Verifying        : fedora-repos-rawhide-40-0.1.noarch                  60/154 
  Verifying        : filesystem-3.18-6.fc39.ppc64le                      61/154 
  Verifying        : findutils-1:4.9.0-6.fc40.ppc64le                    62/154 
  Verifying        : fonts-srpm-macros-1:2.0.5-12.fc39.noarch            63/154 
  Verifying        : forge-srpm-macros-0.1.0-1.fc40.noarch               64/154 
  Verifying        : fpc-srpm-macros-1.3-8.fc39.noarch                   65/154 
  Verifying        : gawk-5.2.2-2.fc39.ppc64le                           66/154 
  Verifying        : gdb-minimal-13.2-8.fc40.ppc64le                     67/154 
  Verifying        : gdbm-libs-1:1.23-4.fc39.ppc64le                     68/154 
  Verifying        : ghc-srpm-macros-1.6.1-2.fc39.noarch                 69/154 
  Verifying        : gmp-1:6.2.1-5.fc39.ppc64le                          70/154 
  Verifying        : gnat-srpm-macros-6-3.fc39.noarch                    71/154 
  Verifying        : go-srpm-macros-3.2.0-7.fc40.noarch                  72/154 
  Verifying        : grep-3.11-5.fc40.ppc64le                            73/154 
  Verifying        : gzip-1.12-6.fc39.ppc64le                            74/154 
  Verifying        : info-7.0.3-3.fc39.ppc64le                           75/154 
  Verifying        : jansson-2.13.1-7.fc39.ppc64le                       76/154 
  Verifying        : kernel-srpm-macros-1.0-20.fc39.noarch               77/154 
  Verifying        : keyutils-libs-1.6.1-7.fc39.ppc64le                  78/154 
  Verifying        : krb5-libs-1.21.2-1.fc40.ppc64le                     79/154 
  Verifying        : libacl-2.3.1-9.fc40.ppc64le                         80/154 
  Verifying        : libattr-2.5.1-9.fc40.ppc64le                        81/154 
  Verifying        : libbrotli-1.1.0-1.fc40.ppc64le                      82/154 
  Verifying        : libcap-2.48-7.fc39.ppc64le                          83/154 
  Verifying        : libcap-ng-0.8.3-8.fc40.ppc64le                      84/154 
  Verifying        : libcom_err-1.47.0-2.fc39.ppc64le                    85/154 
  Verifying        : libeconf-0.5.2-1.fc40.ppc64le                       86/154 
  Verifying        : libevent-2.1.12-9.fc39.ppc64le                      87/154 
  Verifying        : libffi-3.4.4-4.fc39.ppc64le                         88/154 
  Verifying        : libgcc-13.2.1-1.fc39.ppc64le                        89/154 
  Verifying        : libgomp-13.2.1-1.fc39.ppc64le                       90/154 
  Verifying        : libidn2-2.3.4-3.fc39.ppc64le                        91/154 
  Verifying        : libnsl2-2.0.0-6.fc39.ppc64le                        92/154 
  Verifying        : libpkgconf-1.9.5-2.fc39.ppc64le                     93/154 
  Verifying        : libpsl-0.21.2-4.fc39.ppc64le                        94/154 
  Verifying        : libpwquality-1.4.5-6.fc39.ppc64le                   95/154 
  Verifying        : librtas-2.0.4-3.fc39.ppc64le                        96/154 
  Verifying        : libselinux-3.5-5.fc39.ppc64le                       97/154 
  Verifying        : libsemanage-3.5-4.fc39.ppc64le                      98/154 
  Verifying        : libsepol-3.5-2.fc39.ppc64le                         99/154 
  Verifying        : libsigsegv-2.14-5.fc39.ppc64le                     100/154 
  Verifying        : libstdc++-13.2.1-1.fc39.ppc64le                    101/154 
  Verifying        : libtasn1-4.19.0-3.fc39.ppc64le                     102/154 
  Verifying        : libtirpc-1.3.3-1.rc2.fc39.ppc64le                  103/154 
  Verifying        : libunistring-1.1-5.fc40.ppc64le                    104/154 
  Verifying        : libutempter-1.2.1-10.fc39.ppc64le                  105/154 
  Verifying        : libverto-0.3.2-6.fc39.ppc64le                      106/154 
  Verifying        : libxcrypt-4.4.36-2.fc39.ppc64le                    107/154 
  Verifying        : lua-libs-5.4.6-3.fc39.ppc64le                      108/154 
  Verifying        : lua-srpm-macros-1-9.fc39.noarch                    109/154 
  Verifying        : lz4-libs-1.9.4-4.fc39.ppc64le                      110/154 
  Verifying        : mpfr-4.2.0-3.fc39.ppc64le                          111/154 
  Verifying        : ncurses-base-6.4-7.20230520.fc40.noarch            112/154 
  Verifying        : ncurses-libs-6.4-7.20230520.fc40.ppc64le           113/154 
  Verifying        : ocaml-srpm-macros-8-2.fc39.noarch                  114/154 
  Verifying        : openblas-srpm-macros-2-14.fc39.noarch              115/154 
  Verifying        : openldap-2.6.6-1.fc39.ppc64le                      116/154 
  Verifying        : p11-kit-0.25.0-2.fc39.ppc64le                      117/154 
  Verifying        : p11-kit-trust-0.25.0-2.fc39.ppc64le                118/154 
  Verifying        : package-notes-srpm-macros-0.5-9.fc39.noarch        119/154 
  Verifying        : pam-1.5.3-2.fc39.ppc64le                           120/154 
  Verifying        : pam-libs-1.5.3-2.fc39.ppc64le                      121/154 
  Verifying        : patch-2.7.6-22.fc39.ppc64le                        122/154 
  Verifying        : pcre2-10.42-1.fc39.2.ppc64le                       123/154 
  Verifying        : pcre2-syntax-10.42-1.fc39.2.noarch                 124/154 
  Verifying        : perl-srpm-macros-1-51.fc39.noarch                  125/154 
  Verifying        : pkgconf-1.9.5-2.fc39.ppc64le                       126/154 
  Verifying        : pkgconf-m4-1.9.5-2.fc39.noarch                     127/154 
  Verifying        : pkgconf-pkg-config-1.9.5-2.fc39.ppc64le            128/154 
  Verifying        : popt-1.19-3.fc39.ppc64le                           129/154 
  Verifying        : publicsuffix-list-dafsa-20230812-1.fc40.noarch     130/154 
  Verifying        : pyproject-srpm-macros-1.9.0-2.fc39.noarch          131/154 
  Verifying        : python-srpm-macros-3.12-4.fc40.noarch              132/154 
  Verifying        : qt5-srpm-macros-5.15.10-2.fc39.noarch              133/154 
  Verifying        : qt6-srpm-macros-6.5.2-2.fc39.noarch                134/154 
  Verifying        : readline-8.2-4.fc39.ppc64le                        135/154 
  Verifying        : rpm-4.18.99-1.fc40.ppc64le                         136/154 
  Verifying        : rpm-build-4.18.99-1.fc40.ppc64le                   137/154 
  Verifying        : rpm-build-libs-4.18.99-1.fc40.ppc64le              138/154 
  Verifying        : rpm-libs-4.18.99-1.fc40.ppc64le                    139/154 
  Verifying        : rpm-sequoia-1.5.0-1.fc40.ppc64le                   140/154 
  Verifying        : rust-srpm-macros-24-5.fc40.noarch                  141/154 
  Verifying        : sed-4.8-14.fc39.ppc64le                            142/154 
  Verifying        : setup-2.14.4-1.fc39.noarch                         143/154 
  Verifying        : shadow-utils-2:4.14.0-1.fc40.ppc64le               144/154 
  Verifying        : sqlite-libs-3.43.1-1.fc40.ppc64le                  145/154 
  Verifying        : systemd-libs-254.1-2.fc40.ppc64le                  146/154 
  Verifying        : tar-2:1.35-2.fc40.ppc64le                          147/154 
  Verifying        : tzdata-2023c-3.fc40.noarch                         148/154 
  Verifying        : unzip-6.0-62.fc39.ppc64le                          149/154 
  Verifying        : which-2.21-40.fc39.ppc64le                         150/154 
  Verifying        : xxhash-libs-0.8.2-1.fc39.ppc64le                   151/154 
  Verifying        : xz-5.4.4-1.fc39.ppc64le                            152/154 
  Verifying        : xz-libs-5.4.4-1.fc39.ppc64le                       153/154 
  Verifying        : zip-3.0-38.fc39.ppc64le                            154/154 

Installed:
  alternatives-1.25-1.fc39.ppc64le                                              
  ansible-srpm-macros-1-11.fc39.noarch                                          
  audit-libs-3.1.2-4.fc40.ppc64le                                               
  authselect-1.4.2-3.fc39.ppc64le                                               
  authselect-libs-1.4.2-3.fc39.ppc64le                                          
  basesystem-11-18.fc39.noarch                                                  
  bash-5.2.15-5.fc39.ppc64le                                                    
  binutils-2.41-5.fc40.ppc64le                                                  
  binutils-gold-2.41-5.fc40.ppc64le                                             
  bzip2-1.0.8-16.fc39.ppc64le                                                   
  bzip2-libs-1.0.8-16.fc39.ppc64le                                              
  ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch                              
  coreutils-9.4-1.fc40.ppc64le                                                  
  coreutils-common-9.4-1.fc40.ppc64le                                           
  cpio-2.14-4.fc39.ppc64le                                                      
  cracklib-2.9.11-2.fc40.ppc64le                                                
  crypto-policies-20230731-1.git5ed06e0.fc39.noarch                             
  curl-8.3.0-1.fc40.ppc64le                                                     
  cyrus-sasl-lib-2.1.28-11.fc40.ppc64le                                         
  debugedit-5.0-10.fc39.ppc64le                                                 
  diffutils-3.10-3.fc39.ppc64le                                                 
  dwz-0.15-3.fc39.ppc64le                                                       
  ed-1.19-4.fc39.ppc64le                                                        
  efi-srpm-macros-5-9.fc39.noarch                                               
  elfutils-0.189-6.fc40.ppc64le                                                 
  elfutils-debuginfod-client-0.189-6.fc40.ppc64le                               
  elfutils-default-yama-scope-0.189-6.fc40.noarch                               
  elfutils-libelf-0.189-6.fc40.ppc64le                                          
  elfutils-libs-0.189-6.fc40.ppc64le                                            
  fedora-gpg-keys-40-0.1.noarch                                                 
  fedora-release-40-0.7.noarch                                                  
  fedora-release-common-40-0.7.noarch                                           
  fedora-release-identity-basic-40-0.7.noarch                                   
  fedora-repos-40-0.1.noarch                                                    
  fedora-repos-rawhide-40-0.1.noarch                                            
  file-5.45-1.fc40.ppc64le                                                      
  file-libs-5.45-1.fc40.ppc64le                                                 
  filesystem-3.18-6.fc39.ppc64le                                                
  findutils-1:4.9.0-6.fc40.ppc64le                                              
  fonts-srpm-macros-1:2.0.5-12.fc39.noarch                                      
  forge-srpm-macros-0.1.0-1.fc40.noarch                                         
  fpc-srpm-macros-1.3-8.fc39.noarch                                             
  gawk-5.2.2-2.fc39.ppc64le                                                     
  gdb-minimal-13.2-8.fc40.ppc64le                                               
  gdbm-libs-1:1.23-4.fc39.ppc64le                                               
  ghc-srpm-macros-1.6.1-2.fc39.noarch                                           
  glibc-2.38.9000-8.fc40.ppc64le                                                
  glibc-common-2.38.9000-8.fc40.ppc64le                                         
  glibc-gconv-extra-2.38.9000-8.fc40.ppc64le                                    
  glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le                               
  gmp-1:6.2.1-5.fc39.ppc64le                                                    
  gnat-srpm-macros-6-3.fc39.noarch                                              
  go-srpm-macros-3.2.0-7.fc40.noarch                                            
  grep-3.11-5.fc40.ppc64le                                                      
  gzip-1.12-6.fc39.ppc64le                                                      
  info-7.0.3-3.fc39.ppc64le                                                     
  jansson-2.13.1-7.fc39.ppc64le                                                 
  kernel-srpm-macros-1.0-20.fc39.noarch                                         
  keyutils-libs-1.6.1-7.fc39.ppc64le                                            
  krb5-libs-1.21.2-1.fc40.ppc64le                                               
  libacl-2.3.1-9.fc40.ppc64le                                                   
  libarchive-3.7.2-1.fc40.ppc64le                                               
  libattr-2.5.1-9.fc40.ppc64le                                                  
  libblkid-2.39.2-1.fc40.ppc64le                                                
  libbrotli-1.1.0-1.fc40.ppc64le                                                
  libcap-2.48-7.fc39.ppc64le                                                    
  libcap-ng-0.8.3-8.fc40.ppc64le                                                
  libcom_err-1.47.0-2.fc39.ppc64le                                              
  libcurl-8.3.0-1.fc40.ppc64le                                                  
  libdb-5.3.28-58.fc40.ppc64le                                                  
  libeconf-0.5.2-1.fc40.ppc64le                                                 
  libevent-2.1.12-9.fc39.ppc64le                                                
  libfdisk-2.39.2-1.fc40.ppc64le                                                
  libffi-3.4.4-4.fc39.ppc64le                                                   
  libgcc-13.2.1-1.fc39.ppc64le                                                  
  libgomp-13.2.1-1.fc39.ppc64le                                                 
  libidn2-2.3.4-3.fc39.ppc64le                                                  
  libmount-2.39.2-1.fc40.ppc64le                                                
  libnghttp2-1.56.0-1.fc40.ppc64le                                              
  libnsl2-2.0.0-6.fc39.ppc64le                                                  
  libpkgconf-1.9.5-2.fc39.ppc64le                                               
  libpsl-0.21.2-4.fc39.ppc64le                                                  
  libpwquality-1.4.5-6.fc39.ppc64le                                             
  librtas-2.0.4-3.fc39.ppc64le                                                  
  libselinux-3.5-5.fc39.ppc64le                                                 
  libsemanage-3.5-4.fc39.ppc64le                                                
  libsepol-3.5-2.fc39.ppc64le                                                   
  libsigsegv-2.14-5.fc39.ppc64le                                                
  libsmartcols-2.39.2-1.fc40.ppc64le                                            
  libssh-0.10.5-2.fc40.ppc64le                                                  
  libssh-config-0.10.5-2.fc40.noarch                                            
  libstdc++-13.2.1-1.fc39.ppc64le                                               
  libtasn1-4.19.0-3.fc39.ppc64le                                                
  libtirpc-1.3.3-1.rc2.fc39.ppc64le                                             
  libunistring-1.1-5.fc40.ppc64le                                               
  libutempter-1.2.1-10.fc39.ppc64le                                             
  libuuid-2.39.2-1.fc40.ppc64le                                                 
  libverto-0.3.2-6.fc39.ppc64le                                                 
  libxcrypt-4.4.36-2.fc39.ppc64le                                               
  libxml2-2.11.5-1.fc40.ppc64le                                                 
  libzstd-1.5.5-4.fc40.ppc64le                                                  
  lua-libs-5.4.6-3.fc39.ppc64le                                                 
  lua-srpm-macros-1-9.fc39.noarch                                               
  lz4-libs-1.9.4-4.fc39.ppc64le                                                 
  mpfr-4.2.0-3.fc39.ppc64le                                                     
  ncurses-base-6.4-7.20230520.fc40.noarch                                       
  ncurses-libs-6.4-7.20230520.fc40.ppc64le                                      
  ocaml-srpm-macros-8-2.fc39.noarch                                             
  openblas-srpm-macros-2-14.fc39.noarch                                         
  openldap-2.6.6-1.fc39.ppc64le                                                 
  openssl-libs-1:3.1.1-4.fc40.ppc64le                                           
  p11-kit-0.25.0-2.fc39.ppc64le                                                 
  p11-kit-trust-0.25.0-2.fc39.ppc64le                                           
  package-notes-srpm-macros-0.5-9.fc39.noarch                                   
  pam-1.5.3-2.fc39.ppc64le                                                      
  pam-libs-1.5.3-2.fc39.ppc64le                                                 
  patch-2.7.6-22.fc39.ppc64le                                                   
  pcre2-10.42-1.fc39.2.ppc64le                                                  
  pcre2-syntax-10.42-1.fc39.2.noarch                                            
  perl-srpm-macros-1-51.fc39.noarch                                             
  pkgconf-1.9.5-2.fc39.ppc64le                                                  
  pkgconf-m4-1.9.5-2.fc39.noarch                                                
  pkgconf-pkg-config-1.9.5-2.fc39.ppc64le                                       
  popt-1.19-3.fc39.ppc64le                                                      
  publicsuffix-list-dafsa-20230812-1.fc40.noarch                                
  pyproject-srpm-macros-1.9.0-2.fc39.noarch                                     
  python-srpm-macros-3.12-4.fc40.noarch                                         
  qt5-srpm-macros-5.15.10-2.fc39.noarch                                         
  qt6-srpm-macros-6.5.2-2.fc39.noarch                                           
  readline-8.2-4.fc39.ppc64le                                                   
  redhat-rpm-config-270-1.fc40.noarch                                           
  rpm-4.18.99-1.fc40.ppc64le                                                    
  rpm-build-4.18.99-1.fc40.ppc64le                                              
  rpm-build-libs-4.18.99-1.fc40.ppc64le                                         
  rpm-libs-4.18.99-1.fc40.ppc64le                                               
  rpm-sequoia-1.5.0-1.fc40.ppc64le                                              
  rust-srpm-macros-24-5.fc40.noarch                                             
  sed-4.8-14.fc39.ppc64le                                                       
  setup-2.14.4-1.fc39.noarch                                                    
  shadow-utils-2:4.14.0-1.fc40.ppc64le                                          
  sqlite-libs-3.43.1-1.fc40.ppc64le                                             
  systemd-libs-254.1-2.fc40.ppc64le                                             
  tar-2:1.35-2.fc40.ppc64le                                                     
  tzdata-2023c-3.fc40.noarch                                                    
  unzip-6.0-62.fc39.ppc64le                                                     
  util-linux-2.39.2-1.fc40.ppc64le                                              
  util-linux-core-2.39.2-1.fc40.ppc64le                                         
  which-2.21-40.fc39.ppc64le                                                    
  xxhash-libs-0.8.2-1.fc39.ppc64le                                              
  xz-5.4.4-1.fc39.ppc64le                                                       
  xz-libs-5.4.4-1.fc39.ppc64le                                                  
  zip-3.0-38.fc39.ppc64le                                                       
  zlib-ng-compat-2.1.3-3.fc40.ppc64le                                           
  zstd-1.5.5-4.fc40.ppc64le                                                     

Complete!
Finish: installing minimal buildroot with dnf
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.25-1.fc39.ppc64le
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.ppc64le
authselect-1.4.2-3.fc39.ppc64le
authselect-libs-1.4.2-3.fc39.ppc64le
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.ppc64le
binutils-2.41-5.fc40.ppc64le
binutils-gold-2.41-5.fc40.ppc64le
bzip2-1.0.8-16.fc39.ppc64le
bzip2-libs-1.0.8-16.fc39.ppc64le
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.ppc64le
coreutils-common-9.4-1.fc40.ppc64le
cpio-2.14-4.fc39.ppc64le
cracklib-2.9.11-2.fc40.ppc64le
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.ppc64le
cyrus-sasl-lib-2.1.28-11.fc40.ppc64le
debugedit-5.0-10.fc39.ppc64le
diffutils-3.10-3.fc39.ppc64le
dwz-0.15-3.fc39.ppc64le
ed-1.19-4.fc39.ppc64le
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.ppc64le
elfutils-debuginfod-client-0.189-6.fc40.ppc64le
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.ppc64le
elfutils-libs-0.189-6.fc40.ppc64le
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.ppc64le
file-libs-5.45-1.fc40.ppc64le
filesystem-3.18-6.fc39.ppc64le
findutils-4.9.0-6.fc40.ppc64le
fonts-srpm-macros-2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.ppc64le
gdb-minimal-13.2-8.fc40.ppc64le
gdbm-libs-1.23-4.fc39.ppc64le
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-8.fc40.ppc64le
glibc-common-2.38.9000-8.fc40.ppc64le
glibc-gconv-extra-2.38.9000-8.fc40.ppc64le
glibc-minimal-langpack-2.38.9000-8.fc40.ppc64le
gmp-6.2.1-5.fc39.ppc64le
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
gpg-pubkey-18b8e74c-62f2920f
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-5.fc40.ppc64le
gzip-1.12-6.fc39.ppc64le
info-7.0.3-3.fc39.ppc64le
jansson-2.13.1-7.fc39.ppc64le
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.ppc64le
krb5-libs-1.21.2-1.fc40.ppc64le
libacl-2.3.1-9.fc40.ppc64le
libarchive-3.7.2-1.fc40.ppc64le
libattr-2.5.1-9.fc40.ppc64le
libblkid-2.39.2-1.fc40.ppc64le
libbrotli-1.1.0-1.fc40.ppc64le
libcap-2.48-7.fc39.ppc64le
libcap-ng-0.8.3-8.fc40.ppc64le
libcom_err-1.47.0-2.fc39.ppc64le
libcurl-8.3.0-1.fc40.ppc64le
libdb-5.3.28-58.fc40.ppc64le
libeconf-0.5.2-1.fc40.ppc64le
libevent-2.1.12-9.fc39.ppc64le
libfdisk-2.39.2-1.fc40.ppc64le
libffi-3.4.4-4.fc39.ppc64le
libgcc-13.2.1-1.fc39.ppc64le
libgomp-13.2.1-1.fc39.ppc64le
libidn2-2.3.4-3.fc39.ppc64le
libmount-2.39.2-1.fc40.ppc64le
libnghttp2-1.56.0-1.fc40.ppc64le
libnsl2-2.0.0-6.fc39.ppc64le
libpkgconf-1.9.5-2.fc39.ppc64le
libpsl-0.21.2-4.fc39.ppc64le
libpwquality-1.4.5-6.fc39.ppc64le
librtas-2.0.4-3.fc39.ppc64le
libselinux-3.5-5.fc39.ppc64le
libsemanage-3.5-4.fc39.ppc64le
libsepol-3.5-2.fc39.ppc64le
libsigsegv-2.14-5.fc39.ppc64le
libsmartcols-2.39.2-1.fc40.ppc64le
libssh-0.10.5-2.fc40.ppc64le
libssh-config-0.10.5-2.fc40.noarch
libstdc++-13.2.1-1.fc39.ppc64le
libtasn1-4.19.0-3.fc39.ppc64le
libtirpc-1.3.3-1.rc2.fc39.ppc64le
libunistring-1.1-5.fc40.ppc64le
libutempter-1.2.1-10.fc39.ppc64le
libuuid-2.39.2-1.fc40.ppc64le
libverto-0.3.2-6.fc39.ppc64le
libxcrypt-4.4.36-2.fc39.ppc64le
libxml2-2.11.5-1.fc40.ppc64le
libzstd-1.5.5-4.fc40.ppc64le
lua-libs-5.4.6-3.fc39.ppc64le
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.ppc64le
mpfr-4.2.0-3.fc39.ppc64le
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.ppc64le
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.ppc64le
openssl-libs-3.1.1-4.fc40.ppc64le
p11-kit-0.25.0-2.fc39.ppc64le
p11-kit-trust-0.25.0-2.fc39.ppc64le
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.ppc64le
pam-libs-1.5.3-2.fc39.ppc64le
patch-2.7.6-22.fc39.ppc64le
pcre2-10.42-1.fc39.2.ppc64le
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.ppc64le
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.ppc64le
popt-1.19-3.fc39.ppc64le
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.ppc64le
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.ppc64le
rpm-build-4.18.99-1.fc40.ppc64le
rpm-build-libs-4.18.99-1.fc40.ppc64le
rpm-libs-4.18.99-1.fc40.ppc64le
rpm-sequoia-1.5.0-1.fc40.ppc64le
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.ppc64le
setup-2.14.4-1.fc39.noarch
shadow-utils-4.14.0-1.fc40.ppc64le
sqlite-libs-3.43.1-1.fc40.ppc64le
systemd-libs-254.1-2.fc40.ppc64le
tar-1.35-2.fc40.ppc64le
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.ppc64le
util-linux-2.39.2-1.fc40.ppc64le
util-linux-core-2.39.2-1.fc40.ppc64le
which-2.21-40.fc39.ppc64le
xxhash-libs-0.8.2-1.fc39.ppc64le
xz-5.4.4-1.fc39.ppc64le
xz-libs-5.4.4-1.fc39.ppc64le
zip-3.0-38.fc39.ppc64le
zlib-ng-compat-2.1.3-3.fc40.ppc64le
zstd-1.5.5-4.fc40.ppc64le
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689984000
Wrote: /builddir/build/SRPMS/samtools-1.15.1-3.fc40.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-xegk6rp2/samtools/samtools.spec) Config(child) 1 minutes 46 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/samtools-1.15.1-3.fc40.src.rpm)  Config(fedora-rawhide-ppc64le)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695069238.164412/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1695069238.164412/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Finish: chroot init
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-4.18.99-1.fc40.ppc64le
  rpm-sequoia-1.5.0-1.fc40.ppc64le
  python3-dnf-4.16.2-4.fc40.noarch
  python3-dnf-plugins-core-4.4.2-1.fc39.noarch
  yum-4.16.2-4.fc40.noarch
Start: build phase for samtools-1.15.1-3.fc40.src.rpm
Start: build setup for samtools-1.15.1-3.fc40.src.rpm
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689984000
Wrote: /builddir/build/SRPMS/samtools-1.15.1-3.fc40.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  18 kB/s | 1.5 kB     00:00    
fedora                                           88 kB/s | 6.1 kB     00:00    
Dependencies resolved.
================================================================================
 Package                  Arch      Version                   Repository   Size
================================================================================
Installing:
 gcc                      ppc64le   13.2.1-1.fc39             fedora       31 M
 htslib-devel             ppc64le   1.15.1-3.fc40             copr_base   100 k
 htslib-tools             ppc64le   1.15.1-3.fc40             copr_base   628 k
 make                     ppc64le   1:4.4.1-2.fc39            fedora      604 k
 ncurses-devel            ppc64le   6.4-7.20230520.fc40       fedora      546 k
 perl-FindBin             noarch    1.53-500.fc39             fedora       14 k
 perl-Getopt-Long         noarch    1:2.54-500.fc39           fedora       60 k
 perl-interpreter         ppc64le   4:5.38.0-500.fc39         fedora       72 k
 perl-lib                 ppc64le   0.65-500.fc39             fedora       15 k
 zlib-ng-compat-devel     ppc64le   2.1.3-3.fc40              copr_base    34 k
Installing dependencies:
 annobin-docs             noarch    12.26-1.fc40              fedora       94 k
 annobin-plugin-gcc       ppc64le   12.26-1.fc40              fedora      961 k
 cpp                      ppc64le   13.2.1-1.fc39             fedora      9.8 M
 gc                       ppc64le   8.2.2-4.fc39              fedora      122 k
 gcc-plugin-annobin       ppc64le   13.2.1-1.fc39             fedora       49 k
 glibc-devel              ppc64le   2.38.9000-8.fc40          copr_base   515 k
 groff-base               ppc64le   1.23.0-2.fc39             fedora      1.2 M
 guile22                  ppc64le   2.2.7-9.fc39              fedora      6.6 M
 htslib                   ppc64le   1.15.1-3.fc40             copr_base   560 k
 kernel-headers           ppc64le   6.6.0-0.rc1.git0.1.fc40   fedora      1.5 M
 libasan                  ppc64le   13.2.1-1.fc39             fedora      493 k
 libatomic                ppc64le   13.2.1-1.fc39             fedora       35 k
 libmpc                   ppc64le   1.3.1-3.fc39              fedora       95 k
 libtool-ltdl             ppc64le   2.4.7-8.fc40              fedora       40 k
 libubsan                 ppc64le   13.2.1-1.fc39             fedora      250 k
 libxcrypt-devel          ppc64le   4.4.36-2.fc39             fedora       30 k
 ncurses                  ppc64le   6.4-7.20230520.fc40       fedora      424 k
 ncurses-c++-libs         ppc64le   6.4-7.20230520.fc40       fedora       39 k
 perl-AutoLoader          noarch    5.74-500.fc39             fedora       21 k
 perl-B                   ppc64le   1.88-500.fc39             fedora      181 k
 perl-Carp                noarch    1.54-500.fc39             fedora       29 k
 perl-Class-Struct        noarch    0.68-500.fc39             fedora       22 k
 perl-Data-Dumper         ppc64le   2.188-501.fc39            fedora       57 k
 perl-Digest              noarch    1.20-500.fc39             fedora       25 k
 perl-Digest-MD5          ppc64le   2.58-500.fc39             fedora       36 k
 perl-DynaLoader          ppc64le   1.54-500.fc39             fedora       26 k
 perl-Encode              ppc64le   4:3.19-500.fc39           fedora      1.7 M
 perl-Errno               ppc64le   1.37-500.fc39             fedora       15 k
 perl-Exporter            noarch    5.77-500.fc39             fedora       31 k
 perl-Fcntl               ppc64le   1.15-500.fc39             fedora       21 k
 perl-File-Basename       noarch    2.86-500.fc39             fedora       17 k
 perl-File-Path           noarch    2.18-500.fc39             fedora       35 k
 perl-File-Temp           noarch    1:0.231.100-500.fc39      fedora       58 k
 perl-File-stat           noarch    1.13-500.fc39             fedora       17 k
 perl-FileHandle          noarch    2.05-500.fc39             fedora       16 k
 perl-Getopt-Std          noarch    1.13-500.fc39             fedora       16 k
 perl-HTTP-Tiny           noarch    0.088-3.fc39              fedora       56 k
 perl-IO                  ppc64le   1.52-500.fc39             fedora       83 k
 perl-IO-Socket-IP        noarch    0.42-1.fc39               fedora       42 k
 perl-IO-Socket-SSL       noarch    2.083-3.fc39              fedora      225 k
 perl-IPC-Open3           noarch    1.22-500.fc39             fedora       22 k
 perl-MIME-Base64         ppc64le   3.16-500.fc39             fedora       30 k
 perl-Mozilla-CA          noarch    20230821-1.fc40           fedora       13 k
 perl-Net-SSLeay          ppc64le   1.92-10.fc39              fedora      367 k
 perl-POSIX               ppc64le   2.13-500.fc39             fedora      117 k
 perl-PathTools           ppc64le   3.89-500.fc39             fedora       88 k
 perl-Pod-Escapes         noarch    1:1.07-501.fc40           fedora       19 k
 perl-Pod-Perldoc         noarch    3.28.01-501.fc39          fedora       86 k
 perl-Pod-Simple          noarch    1:3.45-4.fc39             fedora      218 k
 perl-Pod-Usage           noarch    4:2.03-500.fc39           fedora       39 k
 perl-Scalar-List-Utils   ppc64le   5:1.63-500.fc39           fedora       75 k
 perl-SelectSaver         noarch    1.02-500.fc39             fedora       12 k
 perl-Socket              ppc64le   4:2.037-3.fc39            fedora       56 k
 perl-Storable            ppc64le   1:3.32-500.fc39           fedora      103 k
 perl-Symbol              noarch    1.09-500.fc39             fedora       14 k
 perl-Term-ANSIColor      noarch    5.01-501.fc39             fedora       47 k
 perl-Term-Cap            noarch    1.18-500.fc39             fedora       22 k
 perl-Text-ParseWords     noarch    3.31-500.fc39             fedora       16 k
 perl-Text-Tabs+Wrap      noarch    2023.0511-3.fc39          fedora       22 k
 perl-Time-Local          noarch    2:1.350-3.fc39            fedora       34 k
 perl-URI                 noarch    5.21-1.fc40               fedora      125 k
 perl-base                noarch    2.27-500.fc39             fedora       16 k
 perl-constant            noarch    1.33-501.fc39             fedora       22 k
 perl-if                  noarch    0.61.000-500.fc39         fedora       14 k
 perl-libnet              noarch    3.15-501.fc39             fedora      129 k
 perl-libs                ppc64le   4:5.38.0-500.fc39         fedora      2.4 M
 perl-locale              noarch    1.10-500.fc39             fedora       14 k
 perl-mro                 ppc64le   1.28-500.fc39             fedora       29 k
 perl-overload            noarch    1.37-500.fc39             fedora       46 k
 perl-overloading         noarch    0.02-500.fc39             fedora       13 k
 perl-parent              noarch    1:0.241-500.fc39          fedora       14 k
 perl-podlators           noarch    1:5.01-500.fc39           fedora      125 k
 perl-vars                noarch    1.05-500.fc39             fedora       13 k

Transaction Summary
================================================================================
Install  83 Packages

Total size: 62 M
Total download size: 1.8 M
Installed size: 224 M
Downloading Packages:
[SKIPPED] glibc-devel-2.38.9000-8.fc40.ppc64le.rpm: Already downloaded         
[SKIPPED] zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le.rpm: Already downloaded    
[SKIPPED] annobin-docs-12.26-1.fc40.noarch.rpm: Already downloaded             
[SKIPPED] annobin-plugin-gcc-12.26-1.fc40.ppc64le.rpm: Already downloaded      
[SKIPPED] cpp-13.2.1-1.fc39.ppc64le.rpm: Already downloaded                    
[SKIPPED] gc-8.2.2-4.fc39.ppc64le.rpm: Already downloaded                      
[SKIPPED] gcc-13.2.1-1.fc39.ppc64le.rpm: Already downloaded                    
[SKIPPED] gcc-plugin-annobin-13.2.1-1.fc39.ppc64le.rpm: Already downloaded     
[SKIPPED] groff-base-1.23.0-2.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] guile22-2.2.7-9.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] kernel-headers-6.6.0-0.rc1.git0.1.fc40.ppc64le.rpm: Already downloaded
[SKIPPED] libasan-13.2.1-1.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] libatomic-13.2.1-1.fc39.ppc64le.rpm: Already downloaded              
[SKIPPED] libmpc-1.3.1-3.fc39.ppc64le.rpm: Already downloaded                  
[SKIPPED] libtool-ltdl-2.4.7-8.fc40.ppc64le.rpm: Already downloaded            
[SKIPPED] libubsan-13.2.1-1.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] libxcrypt-devel-4.4.36-2.fc39.ppc64le.rpm: Already downloaded        
[SKIPPED] make-4.4.1-2.fc39.ppc64le.rpm: Already downloaded                    
[SKIPPED] ncurses-6.4-7.20230520.fc40.ppc64le.rpm: Already downloaded          
[SKIPPED] perl-AutoLoader-5.74-500.fc39.noarch.rpm: Already downloaded         
[SKIPPED] perl-B-1.88-500.fc39.ppc64le.rpm: Already downloaded                 
[SKIPPED] perl-Carp-1.54-500.fc39.noarch.rpm: Already downloaded               
[SKIPPED] perl-Class-Struct-0.68-500.fc39.noarch.rpm: Already downloaded       
[SKIPPED] perl-Data-Dumper-2.188-501.fc39.ppc64le.rpm: Already downloaded      
[SKIPPED] perl-Digest-1.20-500.fc39.noarch.rpm: Already downloaded             
[SKIPPED] perl-Digest-MD5-2.58-500.fc39.ppc64le.rpm: Already downloaded        
[SKIPPED] perl-DynaLoader-1.54-500.fc39.ppc64le.rpm: Already downloaded        
[SKIPPED] perl-Encode-3.19-500.fc39.ppc64le.rpm: Already downloaded            
[SKIPPED] perl-Errno-1.37-500.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] perl-Exporter-5.77-500.fc39.noarch.rpm: Already downloaded           
[SKIPPED] perl-Fcntl-1.15-500.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] perl-File-Basename-2.86-500.fc39.noarch.rpm: Already downloaded      
[SKIPPED] perl-File-Path-2.18-500.fc39.noarch.rpm: Already downloaded          
[SKIPPED] perl-File-Temp-0.231.100-500.fc39.noarch.rpm: Already downloaded     
[SKIPPED] perl-File-stat-1.13-500.fc39.noarch.rpm: Already downloaded          
[SKIPPED] perl-FileHandle-2.05-500.fc39.noarch.rpm: Already downloaded         
[SKIPPED] perl-FindBin-1.53-500.fc39.noarch.rpm: Already downloaded            
[SKIPPED] perl-Getopt-Long-2.54-500.fc39.noarch.rpm: Already downloaded        
[SKIPPED] perl-Getopt-Std-1.13-500.fc39.noarch.rpm: Already downloaded         
[SKIPPED] perl-HTTP-Tiny-0.088-3.fc39.noarch.rpm: Already downloaded           
[SKIPPED] perl-IO-1.52-500.fc39.ppc64le.rpm: Already downloaded                
[SKIPPED] perl-IO-Socket-IP-0.42-1.fc39.noarch.rpm: Already downloaded         
[SKIPPED] perl-IO-Socket-SSL-2.083-3.fc39.noarch.rpm: Already downloaded       
[SKIPPED] perl-IPC-Open3-1.22-500.fc39.noarch.rpm: Already downloaded          
[SKIPPED] perl-MIME-Base64-3.16-500.fc39.ppc64le.rpm: Already downloaded       
[SKIPPED] perl-Mozilla-CA-20230821-1.fc40.noarch.rpm: Already downloaded       
[SKIPPED] perl-Net-SSLeay-1.92-10.fc39.ppc64le.rpm: Already downloaded         
[SKIPPED] perl-POSIX-2.13-500.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] perl-PathTools-3.89-500.fc39.ppc64le.rpm: Already downloaded         
[SKIPPED] perl-Pod-Escapes-1.07-501.fc40.noarch.rpm: Already downloaded        
[SKIPPED] perl-Pod-Perldoc-3.28.01-501.fc39.noarch.rpm: Already downloaded     
[SKIPPED] perl-Pod-Simple-3.45-4.fc39.noarch.rpm: Already downloaded           
[SKIPPED] perl-Pod-Usage-2.03-500.fc39.noarch.rpm: Already downloaded          
[SKIPPED] perl-Scalar-List-Utils-1.63-500.fc39.ppc64le.rpm: Already downloaded 
[SKIPPED] perl-SelectSaver-1.02-500.fc39.noarch.rpm: Already downloaded        
[SKIPPED] perl-Socket-2.037-3.fc39.ppc64le.rpm: Already downloaded             
[SKIPPED] perl-Storable-3.32-500.fc39.ppc64le.rpm: Already downloaded          
[SKIPPED] perl-Symbol-1.09-500.fc39.noarch.rpm: Already downloaded             
[SKIPPED] perl-Term-ANSIColor-5.01-501.fc39.noarch.rpm: Already downloaded     
[SKIPPED] perl-Term-Cap-1.18-500.fc39.noarch.rpm: Already downloaded           
[SKIPPED] perl-Text-ParseWords-3.31-500.fc39.noarch.rpm: Already downloaded    
[SKIPPED] perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch.rpm: Already downloaded  
[SKIPPED] perl-Time-Local-1.350-3.fc39.noarch.rpm: Already downloaded          
[SKIPPED] perl-URI-5.21-1.fc40.noarch.rpm: Already downloaded                  
[SKIPPED] perl-base-2.27-500.fc39.noarch.rpm: Already downloaded               
[SKIPPED] perl-constant-1.33-501.fc39.noarch.rpm: Already downloaded           
[SKIPPED] perl-if-0.61.000-500.fc39.noarch.rpm: Already downloaded             
[SKIPPED] perl-interpreter-5.38.0-500.fc39.ppc64le.rpm: Already downloaded     
[SKIPPED] perl-lib-0.65-500.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] perl-libnet-3.15-501.fc39.noarch.rpm: Already downloaded             
[SKIPPED] perl-libs-5.38.0-500.fc39.ppc64le.rpm: Already downloaded            
[SKIPPED] perl-locale-1.10-500.fc39.noarch.rpm: Already downloaded             
[SKIPPED] perl-mro-1.28-500.fc39.ppc64le.rpm: Already downloaded               
[SKIPPED] perl-overload-1.37-500.fc39.noarch.rpm: Already downloaded           
[SKIPPED] perl-overloading-0.02-500.fc39.noarch.rpm: Already downloaded        
[SKIPPED] perl-parent-0.241-500.fc39.noarch.rpm: Already downloaded            
[SKIPPED] perl-podlators-5.01-500.fc39.noarch.rpm: Already downloaded          
[SKIPPED] perl-vars-1.05-500.fc39.noarch.rpm: Already downloaded               
(79/83): htslib-devel-1.15.1-3.fc40.ppc64le.rpm 1.1 MB/s | 100 kB     00:00    
(80/83): htslib-1.15.1-3.fc40.ppc64le.rpm       5.2 MB/s | 560 kB     00:00    
(81/83): htslib-tools-1.15.1-3.fc40.ppc64le.rpm 5.3 MB/s | 628 kB     00:00    
(82/83): ncurses-c++-libs-6.4-7.20230520.fc40.p 148 kB/s |  39 kB     00:00    
(83/83): ncurses-devel-6.4-7.20230520.fc40.ppc6 976 kB/s | 546 kB     00:00    
--------------------------------------------------------------------------------
Total                                           1.5 MB/s | 1.8 MB     00:01     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
  Installing       : libmpc-1.3.1-3.fc39.ppc64le                           1/83 
  Installing       : htslib-1.15.1-3.fc40.ppc64le                          2/83 
  Installing       : cpp-13.2.1-1.fc39.ppc64le                             3/83 
  Installing       : ncurses-c++-libs-6.4-7.20230520.fc40.ppc64le          4/83 
  Installing       : ncurses-6.4-7.20230520.fc40.ppc64le                   5/83 
  Installing       : libubsan-13.2.1-1.fc39.ppc64le                        6/83 
  Installing       : libtool-ltdl-2.4.7-8.fc40.ppc64le                     7/83 
  Installing       : libatomic-13.2.1-1.fc39.ppc64le                       8/83 
  Installing       : libasan-13.2.1-1.fc39.ppc64le                         9/83 
  Installing       : kernel-headers-6.6.0-0.rc1.git0.1.fc40.ppc64le       10/83 
  Installing       : libxcrypt-devel-4.4.36-2.fc39.ppc64le                11/83 
  Installing       : glibc-devel-2.38.9000-8.fc40.ppc64le                 12/83 
  Running scriptlet: groff-base-1.23.0-2.fc39.ppc64le                     13/83 
  Installing       : groff-base-1.23.0-2.fc39.ppc64le                     13/83 
  Running scriptlet: groff-base-1.23.0-2.fc39.ppc64le                     13/83 
  Installing       : perl-Digest-1.20-500.fc39.noarch                     14/83 
  Installing       : perl-Digest-MD5-2.58-500.fc39.ppc64le                15/83 
  Installing       : perl-B-1.88-500.fc39.ppc64le                         16/83 
  Installing       : perl-FileHandle-2.05-500.fc39.noarch                 17/83 
  Installing       : perl-Data-Dumper-2.188-501.fc39.ppc64le              18/83 
  Installing       : perl-libnet-3.15-501.fc39.noarch                     19/83 
  Installing       : perl-AutoLoader-5.74-500.fc39.noarch                 20/83 
  Installing       : perl-base-2.27-500.fc39.noarch                       21/83 
  Installing       : perl-URI-5.21-1.fc40.noarch                          22/83 
  Installing       : perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch          23/83 
  Installing       : perl-Mozilla-CA-20230821-1.fc40.noarch               24/83 
  Installing       : perl-if-0.61.000-500.fc39.noarch                     25/83 
  Installing       : perl-locale-1.10-500.fc39.noarch                     26/83 
  Installing       : perl-IO-Socket-IP-0.42-1.fc39.noarch                 27/83 
  Installing       : perl-Time-Local-2:1.350-3.fc39.noarch                28/83 
  Installing       : perl-File-Path-2.18-500.fc39.noarch                  29/83 
  Installing       : perl-IO-Socket-SSL-2.083-3.fc39.noarch               30/83 
  Installing       : perl-Net-SSLeay-1.92-10.fc39.ppc64le                 31/83 
  Installing       : perl-Pod-Escapes-1:1.07-501.fc40.noarch              32/83 
  Installing       : perl-Class-Struct-0.68-500.fc39.noarch               33/83 
  Installing       : perl-Term-ANSIColor-5.01-501.fc39.noarch             34/83 
  Installing       : perl-POSIX-2.13-500.fc39.ppc64le                     35/83 
  Installing       : perl-IPC-Open3-1.22-500.fc39.noarch                  36/83 
  Installing       : perl-File-Temp-1:0.231.100-500.fc39.noarch           37/83 
  Installing       : perl-HTTP-Tiny-0.088-3.fc39.noarch                   38/83 
  Installing       : perl-Term-Cap-1.18-500.fc39.noarch                   39/83 
  Installing       : perl-Pod-Simple-1:3.45-4.fc39.noarch                 40/83 
  Installing       : perl-Socket-4:2.037-3.fc39.ppc64le                   41/83 
  Installing       : perl-SelectSaver-1.02-500.fc39.noarch                42/83 
  Installing       : perl-Symbol-1.09-500.fc39.noarch                     43/83 
  Installing       : perl-File-stat-1.13-500.fc39.noarch                  44/83 
  Installing       : perl-podlators-1:5.01-500.fc39.noarch                45/83 
  Installing       : perl-Pod-Perldoc-3.28.01-501.fc39.noarch             46/83 
  Installing       : perl-Fcntl-1.15-500.fc39.ppc64le                     47/83 
  Installing       : perl-Text-ParseWords-3.31-500.fc39.noarch            48/83 
  Installing       : perl-mro-1.28-500.fc39.ppc64le                       49/83 
  Installing       : perl-IO-1.52-500.fc39.ppc64le                        50/83 
  Installing       : perl-overloading-0.02-500.fc39.noarch                51/83 
  Installing       : perl-Pod-Usage-4:2.03-500.fc39.noarch                52/83 
  Installing       : perl-Errno-1.37-500.fc39.ppc64le                     53/83 
  Installing       : perl-File-Basename-2.86-500.fc39.noarch              54/83 
  Installing       : perl-Getopt-Std-1.13-500.fc39.noarch                 55/83 
  Installing       : perl-MIME-Base64-3.16-500.fc39.ppc64le               56/83 
  Installing       : perl-Scalar-List-Utils-5:1.63-500.fc39.ppc64le       57/83 
  Installing       : perl-constant-1.33-501.fc39.noarch                   58/83 
  Installing       : perl-Storable-1:3.32-500.fc39.ppc64le                59/83 
  Installing       : perl-overload-1.37-500.fc39.noarch                   60/83 
  Installing       : perl-parent-1:0.241-500.fc39.noarch                  61/83 
  Installing       : perl-vars-1.05-500.fc39.noarch                       62/83 
  Installing       : perl-Getopt-Long-1:2.54-500.fc39.noarch              63/83 
  Installing       : perl-Carp-1.54-500.fc39.noarch                       64/83 
  Installing       : perl-Exporter-5.77-500.fc39.noarch                   65/83 
  Installing       : perl-PathTools-3.89-500.fc39.ppc64le                 66/83 
  Installing       : perl-DynaLoader-1.54-500.fc39.ppc64le                67/83 
  Installing       : perl-Encode-4:3.19-500.fc39.ppc64le                  68/83 
  Installing       : perl-libs-4:5.38.0-500.fc39.ppc64le                  69/83 
  Installing       : perl-interpreter-4:5.38.0-500.fc39.ppc64le           70/83 
  Installing       : gc-8.2.2-4.fc39.ppc64le                              71/83 
  Installing       : guile22-2.2.7-9.fc39.ppc64le                         72/83 
  Installing       : make-1:4.4.1-2.fc39.ppc64le                          73/83 
  Installing       : gcc-13.2.1-1.fc39.ppc64le                            74/83 
  Running scriptlet: gcc-13.2.1-1.fc39.ppc64le                            74/83 
  Installing       : annobin-docs-12.26-1.fc40.noarch                     75/83 
  Installing       : annobin-plugin-gcc-12.26-1.fc40.ppc64le              76/83 
  Running scriptlet: annobin-plugin-gcc-12.26-1.fc40.ppc64le              76/83 
  Installing       : gcc-plugin-annobin-13.2.1-1.fc39.ppc64le             77/83 
  Running scriptlet: gcc-plugin-annobin-13.2.1-1.fc39.ppc64le             77/83 
  Installing       : perl-FindBin-1.53-500.fc39.noarch                    78/83 
  Installing       : perl-lib-0.65-500.fc39.ppc64le                       79/83 
  Installing       : ncurses-devel-6.4-7.20230520.fc40.ppc64le            80/83 
  Installing       : htslib-devel-1.15.1-3.fc40.ppc64le                   81/83 
  Installing       : htslib-tools-1.15.1-3.fc40.ppc64le                   82/83 
  Installing       : zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le            83/83 
  Running scriptlet: zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le            83/83 
  Verifying        : glibc-devel-2.38.9000-8.fc40.ppc64le                  1/83 
  Verifying        : htslib-1.15.1-3.fc40.ppc64le                          2/83 
  Verifying        : htslib-devel-1.15.1-3.fc40.ppc64le                    3/83 
  Verifying        : htslib-tools-1.15.1-3.fc40.ppc64le                    4/83 
  Verifying        : zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le             5/83 
  Verifying        : annobin-docs-12.26-1.fc40.noarch                      6/83 
  Verifying        : annobin-plugin-gcc-12.26-1.fc40.ppc64le               7/83 
  Verifying        : cpp-13.2.1-1.fc39.ppc64le                             8/83 
  Verifying        : gc-8.2.2-4.fc39.ppc64le                               9/83 
  Verifying        : gcc-13.2.1-1.fc39.ppc64le                            10/83 
  Verifying        : gcc-plugin-annobin-13.2.1-1.fc39.ppc64le             11/83 
  Verifying        : groff-base-1.23.0-2.fc39.ppc64le                     12/83 
  Verifying        : guile22-2.2.7-9.fc39.ppc64le                         13/83 
  Verifying        : kernel-headers-6.6.0-0.rc1.git0.1.fc40.ppc64le       14/83 
  Verifying        : libasan-13.2.1-1.fc39.ppc64le                        15/83 
  Verifying        : libatomic-13.2.1-1.fc39.ppc64le                      16/83 
  Verifying        : libmpc-1.3.1-3.fc39.ppc64le                          17/83 
  Verifying        : libtool-ltdl-2.4.7-8.fc40.ppc64le                    18/83 
  Verifying        : libubsan-13.2.1-1.fc39.ppc64le                       19/83 
  Verifying        : libxcrypt-devel-4.4.36-2.fc39.ppc64le                20/83 
  Verifying        : make-1:4.4.1-2.fc39.ppc64le                          21/83 
  Verifying        : ncurses-6.4-7.20230520.fc40.ppc64le                  22/83 
  Verifying        : ncurses-c++-libs-6.4-7.20230520.fc40.ppc64le         23/83 
  Verifying        : ncurses-devel-6.4-7.20230520.fc40.ppc64le            24/83 
  Verifying        : perl-AutoLoader-5.74-500.fc39.noarch                 25/83 
  Verifying        : perl-B-1.88-500.fc39.ppc64le                         26/83 
  Verifying        : perl-Carp-1.54-500.fc39.noarch                       27/83 
  Verifying        : perl-Class-Struct-0.68-500.fc39.noarch               28/83 
  Verifying        : perl-Data-Dumper-2.188-501.fc39.ppc64le              29/83 
  Verifying        : perl-Digest-1.20-500.fc39.noarch                     30/83 
  Verifying        : perl-Digest-MD5-2.58-500.fc39.ppc64le                31/83 
  Verifying        : perl-DynaLoader-1.54-500.fc39.ppc64le                32/83 
  Verifying        : perl-Encode-4:3.19-500.fc39.ppc64le                  33/83 
  Verifying        : perl-Errno-1.37-500.fc39.ppc64le                     34/83 
  Verifying        : perl-Exporter-5.77-500.fc39.noarch                   35/83 
  Verifying        : perl-Fcntl-1.15-500.fc39.ppc64le                     36/83 
  Verifying        : perl-File-Basename-2.86-500.fc39.noarch              37/83 
  Verifying        : perl-File-Path-2.18-500.fc39.noarch                  38/83 
  Verifying        : perl-File-Temp-1:0.231.100-500.fc39.noarch           39/83 
  Verifying        : perl-File-stat-1.13-500.fc39.noarch                  40/83 
  Verifying        : perl-FileHandle-2.05-500.fc39.noarch                 41/83 
  Verifying        : perl-FindBin-1.53-500.fc39.noarch                    42/83 
  Verifying        : perl-Getopt-Long-1:2.54-500.fc39.noarch              43/83 
  Verifying        : perl-Getopt-Std-1.13-500.fc39.noarch                 44/83 
  Verifying        : perl-HTTP-Tiny-0.088-3.fc39.noarch                   45/83 
  Verifying        : perl-IO-1.52-500.fc39.ppc64le                        46/83 
  Verifying        : perl-IO-Socket-IP-0.42-1.fc39.noarch                 47/83 
  Verifying        : perl-IO-Socket-SSL-2.083-3.fc39.noarch               48/83 
  Verifying        : perl-IPC-Open3-1.22-500.fc39.noarch                  49/83 
  Verifying        : perl-MIME-Base64-3.16-500.fc39.ppc64le               50/83 
  Verifying        : perl-Mozilla-CA-20230821-1.fc40.noarch               51/83 
  Verifying        : perl-Net-SSLeay-1.92-10.fc39.ppc64le                 52/83 
  Verifying        : perl-POSIX-2.13-500.fc39.ppc64le                     53/83 
  Verifying        : perl-PathTools-3.89-500.fc39.ppc64le                 54/83 
  Verifying        : perl-Pod-Escapes-1:1.07-501.fc40.noarch              55/83 
  Verifying        : perl-Pod-Perldoc-3.28.01-501.fc39.noarch             56/83 
  Verifying        : perl-Pod-Simple-1:3.45-4.fc39.noarch                 57/83 
  Verifying        : perl-Pod-Usage-4:2.03-500.fc39.noarch                58/83 
  Verifying        : perl-Scalar-List-Utils-5:1.63-500.fc39.ppc64le       59/83 
  Verifying        : perl-SelectSaver-1.02-500.fc39.noarch                60/83 
  Verifying        : perl-Socket-4:2.037-3.fc39.ppc64le                   61/83 
  Verifying        : perl-Storable-1:3.32-500.fc39.ppc64le                62/83 
  Verifying        : perl-Symbol-1.09-500.fc39.noarch                     63/83 
  Verifying        : perl-Term-ANSIColor-5.01-501.fc39.noarch             64/83 
  Verifying        : perl-Term-Cap-1.18-500.fc39.noarch                   65/83 
  Verifying        : perl-Text-ParseWords-3.31-500.fc39.noarch            66/83 
  Verifying        : perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch          67/83 
  Verifying        : perl-Time-Local-2:1.350-3.fc39.noarch                68/83 
  Verifying        : perl-URI-5.21-1.fc40.noarch                          69/83 
  Verifying        : perl-base-2.27-500.fc39.noarch                       70/83 
  Verifying        : perl-constant-1.33-501.fc39.noarch                   71/83 
  Verifying        : perl-if-0.61.000-500.fc39.noarch                     72/83 
  Verifying        : perl-interpreter-4:5.38.0-500.fc39.ppc64le           73/83 
  Verifying        : perl-lib-0.65-500.fc39.ppc64le                       74/83 
  Verifying        : perl-libnet-3.15-501.fc39.noarch                     75/83 
  Verifying        : perl-libs-4:5.38.0-500.fc39.ppc64le                  76/83 
  Verifying        : perl-locale-1.10-500.fc39.noarch                     77/83 
  Verifying        : perl-mro-1.28-500.fc39.ppc64le                       78/83 
  Verifying        : perl-overload-1.37-500.fc39.noarch                   79/83 
  Verifying        : perl-overloading-0.02-500.fc39.noarch                80/83 
  Verifying        : perl-parent-1:0.241-500.fc39.noarch                  81/83 
  Verifying        : perl-podlators-1:5.01-500.fc39.noarch                82/83 
  Verifying        : perl-vars-1.05-500.fc39.noarch                       83/83 

Installed:
  annobin-docs-12.26-1.fc40.noarch                                              
  annobin-plugin-gcc-12.26-1.fc40.ppc64le                                       
  cpp-13.2.1-1.fc39.ppc64le                                                     
  gc-8.2.2-4.fc39.ppc64le                                                       
  gcc-13.2.1-1.fc39.ppc64le                                                     
  gcc-plugin-annobin-13.2.1-1.fc39.ppc64le                                      
  glibc-devel-2.38.9000-8.fc40.ppc64le                                          
  groff-base-1.23.0-2.fc39.ppc64le                                              
  guile22-2.2.7-9.fc39.ppc64le                                                  
  htslib-1.15.1-3.fc40.ppc64le                                                  
  htslib-devel-1.15.1-3.fc40.ppc64le                                            
  htslib-tools-1.15.1-3.fc40.ppc64le                                            
  kernel-headers-6.6.0-0.rc1.git0.1.fc40.ppc64le                                
  libasan-13.2.1-1.fc39.ppc64le                                                 
  libatomic-13.2.1-1.fc39.ppc64le                                               
  libmpc-1.3.1-3.fc39.ppc64le                                                   
  libtool-ltdl-2.4.7-8.fc40.ppc64le                                             
  libubsan-13.2.1-1.fc39.ppc64le                                                
  libxcrypt-devel-4.4.36-2.fc39.ppc64le                                         
  make-1:4.4.1-2.fc39.ppc64le                                                   
  ncurses-6.4-7.20230520.fc40.ppc64le                                           
  ncurses-c++-libs-6.4-7.20230520.fc40.ppc64le                                  
  ncurses-devel-6.4-7.20230520.fc40.ppc64le                                     
  perl-AutoLoader-5.74-500.fc39.noarch                                          
  perl-B-1.88-500.fc39.ppc64le                                                  
  perl-Carp-1.54-500.fc39.noarch                                                
  perl-Class-Struct-0.68-500.fc39.noarch                                        
  perl-Data-Dumper-2.188-501.fc39.ppc64le                                       
  perl-Digest-1.20-500.fc39.noarch                                              
  perl-Digest-MD5-2.58-500.fc39.ppc64le                                         
  perl-DynaLoader-1.54-500.fc39.ppc64le                                         
  perl-Encode-4:3.19-500.fc39.ppc64le                                           
  perl-Errno-1.37-500.fc39.ppc64le                                              
  perl-Exporter-5.77-500.fc39.noarch                                            
  perl-Fcntl-1.15-500.fc39.ppc64le                                              
  perl-File-Basename-2.86-500.fc39.noarch                                       
  perl-File-Path-2.18-500.fc39.noarch                                           
  perl-File-Temp-1:0.231.100-500.fc39.noarch                                    
  perl-File-stat-1.13-500.fc39.noarch                                           
  perl-FileHandle-2.05-500.fc39.noarch                                          
  perl-FindBin-1.53-500.fc39.noarch                                             
  perl-Getopt-Long-1:2.54-500.fc39.noarch                                       
  perl-Getopt-Std-1.13-500.fc39.noarch                                          
  perl-HTTP-Tiny-0.088-3.fc39.noarch                                            
  perl-IO-1.52-500.fc39.ppc64le                                                 
  perl-IO-Socket-IP-0.42-1.fc39.noarch                                          
  perl-IO-Socket-SSL-2.083-3.fc39.noarch                                        
  perl-IPC-Open3-1.22-500.fc39.noarch                                           
  perl-MIME-Base64-3.16-500.fc39.ppc64le                                        
  perl-Mozilla-CA-20230821-1.fc40.noarch                                        
  perl-Net-SSLeay-1.92-10.fc39.ppc64le                                          
  perl-POSIX-2.13-500.fc39.ppc64le                                              
  perl-PathTools-3.89-500.fc39.ppc64le                                          
  perl-Pod-Escapes-1:1.07-501.fc40.noarch                                       
  perl-Pod-Perldoc-3.28.01-501.fc39.noarch                                      
  perl-Pod-Simple-1:3.45-4.fc39.noarch                                          
  perl-Pod-Usage-4:2.03-500.fc39.noarch                                         
  perl-Scalar-List-Utils-5:1.63-500.fc39.ppc64le                                
  perl-SelectSaver-1.02-500.fc39.noarch                                         
  perl-Socket-4:2.037-3.fc39.ppc64le                                            
  perl-Storable-1:3.32-500.fc39.ppc64le                                         
  perl-Symbol-1.09-500.fc39.noarch                                              
  perl-Term-ANSIColor-5.01-501.fc39.noarch                                      
  perl-Term-Cap-1.18-500.fc39.noarch                                            
  perl-Text-ParseWords-3.31-500.fc39.noarch                                     
  perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch                                   
  perl-Time-Local-2:1.350-3.fc39.noarch                                         
  perl-URI-5.21-1.fc40.noarch                                                   
  perl-base-2.27-500.fc39.noarch                                                
  perl-constant-1.33-501.fc39.noarch                                            
  perl-if-0.61.000-500.fc39.noarch                                              
  perl-interpreter-4:5.38.0-500.fc39.ppc64le                                    
  perl-lib-0.65-500.fc39.ppc64le                                                
  perl-libnet-3.15-501.fc39.noarch                                              
  perl-libs-4:5.38.0-500.fc39.ppc64le                                           
  perl-locale-1.10-500.fc39.noarch                                              
  perl-mro-1.28-500.fc39.ppc64le                                                
  perl-overload-1.37-500.fc39.noarch                                            
  perl-overloading-0.02-500.fc39.noarch                                         
  perl-parent-1:0.241-500.fc39.noarch                                           
  perl-podlators-1:5.01-500.fc39.noarch                                         
  perl-vars-1.05-500.fc39.noarch                                                
  zlib-ng-compat-devel-2.1.3-3.fc40.ppc64le                                     

Complete!
Finish: build setup for samtools-1.15.1-3.fc40.src.rpm
Start: rpmbuild samtools-1.15.1-3.fc40.src.rpm
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1689984000
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.rBLIAE
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf samtools-1.15.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/samtools-1.15.1.tar.bz2
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd samtools-1.15.1
+ rm -rf /builddir/build/BUILD/samtools-1.15.1-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/samtools-1.15.1-SPECPARTS
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ rm -f INSTALL
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.vYEapN
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd samtools-1.15.1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
--- ./htslib-1.15.1/configure.backup	2022-04-07 15:42:52.000000000 +0000
+++ ./htslib-1.15.1/configure	2023-09-18 20:36:18.033900806 +0000
@@ -1697,7 +1697,7 @@
 #ifdef __cplusplus
 extern "C"
 #endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
 /* The GNU C library defines this for functions which it implements
     to always fail with ENOSYS.  Some functions are actually named
     something starting with __ and the normal name is an alias.  */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
++ grep -q runstatedir=DIR ./configure
++ echo --runstatedir=/run
+ ./configure --build=ppc64le-redhat-linux --host=ppc64le-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' --prefix=/usr --with-htslib=system
checking for gawk... gawk
checking for ppc64le-redhat-linux-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for C compiler warning flags... -Wall
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for htslib/sam.h... yes
checking for hts_version in -lhts... yes
checking for NcursesW wide-character library... yes
checking for working ncursesw/curses.h... yes
checking for library containing cbreak... none required
checking for zlib.h... yes
checking for inflate in -lz... yes
checking for library containing regcomp... none required
configure: creating ./config.status
config.status: creating config.mk
config.status: creating config.h
+ /usr/bin/make -O -j5 V=1 VERBOSE=1
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_aux.o bam_aux.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam.o bam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_index.o bam_index.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_cat.o bam_cat.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_md.o bam_md.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_plbuf.o bam_plbuf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_fastq.o bam_fastq.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_reheader.o bam_reheader.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_plcmd.o bam_plcmd.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_rmdup.o bam_rmdup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_rmdupse.o bam_rmdupse.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_mate.o bam_mate.c
echo '#define SAMTOOLS_VERSION "1.15.1"' > version.h
echo '#define SAMTOOLS_CC "gcc"' >> version.h
echo '#define SAMTOOLS_CPPFLAGS ""' >> version.h
echo '#define SAMTOOLS_CFLAGS "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection"' >> version.h
echo '#define SAMTOOLS_LDFLAGS "-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "' >> version.h
echo '#define SAMTOOLS_HTSDIR ""' >> version.h
echo '#define SAMTOOLS_LIBS ""' >> version.h
echo '#define SAMTOOLS_CURSES_LIB "-lncursesw"' >> version.h
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_color.o bam_color.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam2bcf.o bam2bcf.c
bam2bcf.c: In function ‘bcf_call_glfgen’:
bam2bcf.c:81:33: warning: argument 2 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   81 |         bca->bases = (uint16_t*)realloc(bca->bases, 2 * bca->max_bases);
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/htslib/kstring.h:30,
                 from /usr/include/htslib/hts.h:37,
                 from bam2bcf.c:30:
/usr/include/stdlib.h:683:14: note: in a call to allocation function ‘realloc’ declared here
  683 | extern void *realloc (void *__ptr, size_t __size)
      |              ^~~~~~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sam_view.o sam_view.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_stat.o bam_stat.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o cut_target.o cut_target.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sample.o sample.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o coverage.o coverage.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o padding.o padding.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam2depth.o bam2depth.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bedcov.o bedcov.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o faidx.o faidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o phase.o phase.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o dict.o dict.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_flags.o bam_flags.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o stats_isize.o stats_isize.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_split.o bam_split.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bamshuf.o bamshuf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_tview.o bam_tview.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_tview_curses.o bam_tview_curses.c
bam_tview_curses.c: In function ‘tv_win_help’:
bam_tview_curses.c:333:14: warning: ‘base’ is used uninitialized [-Wuninitialized]
  333 |     tview_t* base=(tview_t*)base;
      |              ^~~~
bam_tview_curses.c:333:14: note: ‘base’ was declared here
  333 |     tview_t* base=(tview_t*)base;
      |              ^~~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_lpileup.o bam_lpileup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_quickcheck.o bam_quickcheck.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_tview_html.o bam_tview_html.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o tmp_file.o tmp_file.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_addrprg.o bam_addrprg.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_sort.o bam_sort.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_import.o bam_import.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_ampliconclip.o bam_ampliconclip.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_samples.o bam_samples.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o stats.o stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_markdup.o bam_markdup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o consensus_pileup.o consensus_pileup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sam_opts.o sam_opts.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sam_utils.o sam_utils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o amplicon_stats.o amplicon_stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DMAQ_LONGREADS -I.  -I./lz4  -c -o misc/maq2sam-long.o misc/maq2sam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_consensus.o bam_consensus.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/maq2sam-short.o misc/maq2sam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/md5sum-lite.o misc/md5sum-lite.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/ace2sam.o misc/ace2sam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/md5fa.o misc/md5fa.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bedidx.o bedidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/test.o test/test.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/wgsim.o misc/wgsim.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_count_rg.o test/split/test_count_rg.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_expand_format_string.o test/split/test_expand_format_string.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_filter_header_rg.o test/split/test_filter_header_rg.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_parse_args.o test/split/test_parse_args.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/vcf-miniview.o test/vcf-miniview.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bamtk.o bamtk.c
ar -rcs libst.a sam_opts.o sam_utils.o bedidx.o
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o lz4/lz4.o lz4/lz4.c
gcc -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o misc/maq2sam-long misc/maq2sam-long.o -lz 
gcc -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o misc/maq2sam-short misc/maq2sam-short.o -lz 
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o misc/md5fa misc/md5fa.o -lhts -lz 
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o misc/md5sum-lite misc/md5sum-lite.o -lhts -lz 
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/merge/test_rtrans_build.o test/merge/test_rtrans_build.c
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o misc/ace2sam misc/ace2sam.o -lhts -lz 
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/split/test_count_rg test/split/test_count_rg.o test/test.o libst.a -lhts -lz  -lpthread
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/merge/test_bam_translate.o test/merge/test_bam_translate.c
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/split/test_filter_header_rg test/split/test_filter_header_rg.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/split/test_expand_format_string test/split/test_expand_format_string.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o misc/wgsim misc/wgsim.o -lm -lhts -lz 
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/vcf-miniview test/vcf-miniview.o -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/split/test_parse_args test/split/test_parse_args.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/merge/test_rtrans_build test/merge/test_rtrans_build.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/merge/test_bam_translate test/merge/test_bam_translate.o test/test.o libst.a -lhts -lz  -lpthread
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/merge/test_trans_tbl_init.o test/merge/test_trans_tbl_init.c
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o test/merge/test_trans_tbl_init test/merge/test_trans_tbl_init.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o samtools bam.o bam_aux.o bam_index.o bam_plcmd.o sam_view.o bam_fastq.o bam_cat.o bam_md.o bam_plbuf.o bam_reheader.o bam_sort.o bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o bamtk.o bam2bcf.o sample.o cut_target.o phase.o bam2depth.o coverage.o padding.o bedcov.o bamshuf.o faidx.o dict.o stats.o stats_isize.o bam_flags.o bam_split.o bam_tview.o bam_tview_curses.o bam_tview_html.o bam_lpileup.o bam_quickcheck.o bam_addrprg.o bam_markdup.o tmp_file.o bam_ampliconclip.o amplicon_stats.o bam_import.o bam_samples.o bam_consensus.o consensus_pileup.o ./lz4/lz4.o libst.a -lhts -lncursesw -lm -lz  -lpthread
In function ‘bcf_call_glfgen’,
    inlined from ‘tv_pl_func’ at bam_tview.c:196:9:
bam2bcf.c:81:33: warning: argument 2 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   81 |         bca->bases = (uint16_t*)realloc(bca->bases, 2 * bca->max_bases);
      |                                 ^
/usr/include/stdlib.h: In function ‘tv_pl_func’:
/usr/include/stdlib.h:683:14: note: in a call to allocation function ‘realloc’ declared here
  683 | extern void *realloc (void *__ptr, size_t __size)
      |              ^
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.W12jt7
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le
++ dirname /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd samtools-1.15.1
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le 'INSTALL=/usr/bin/install -p'
mkdir -p -m 755 /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/man/man1
/usr/bin/install -p samtools /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin
/usr/bin/install -p misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin
/usr/bin/install -p misc/blast2sam.pl misc/bowtie2sam.pl misc/export2sam.pl misc/fasta-sanitize.pl misc/interpolate_sam.pl misc/novo2sam.pl misc/plot-ampliconstats misc/plot-bamstats misc/psl2sam.pl misc/sam2vcf.pl misc/samtools.pl misc/seq_cache_populate.pl misc/soap2sam.pl misc/wgsim_eval.pl misc/zoom2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin
/usr/bin/install -p -m 644 doc/samtools*.1 misc/wgsim.1 /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/man/man1
++ grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/ace2sam /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/blast2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/bowtie2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/export2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/fasta-sanitize.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/interpolate_sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/maq2sam-long /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/maq2sam-short /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/md5fa /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/md5sum-lite /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/novo2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/plot-ampliconstats /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/plot-bamstats /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/psl2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/sam2vcf.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/samtools /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/samtools.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/seq_cache_populate.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/soap2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/wgsim /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/wgsim_eval.pl /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/zoom2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/blast2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/bowtie2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/export2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/fasta-sanitize.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/interpolate_sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/novo2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/plot-ampliconstats
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/plot-bamstats
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/psl2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/sam2vcf.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/samtools.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/seq_cache_populate.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/soap2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/wgsim_eval.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/bin/zoom2sam.pl
+ /usr/bin/find-debuginfo -j5 --strict-build-id -m -i --build-id-seed 1.15.1-3.fc40 --unique-debug-suffix -1.15.1-3.fc40.ppc64le --unique-debug-src-base samtools-1.15.1-3.fc40.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/samtools-1.15.1
find-debuginfo: starting
Extracting debug info from 7 files
DWARF-compressing 7 files
sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/samtools-1.15.1-3.fc40.ppc64le
2442 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j5
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.KkJugV
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd samtools-1.15.1
+ ldd samtools
+ grep -E '/lib(64)?/libhts\.so\.'
	libhts.so.3 => /lib64/libhts.so.3 (0x00007fff89a80000)
+ make test
test/split/test_count_rg
test/split/test_expand_format_string
test/split/test_filter_header_rg
test/split/test_parse_args
REF_PATH=: test/test.pl --exec bgzip= ${TEST_OPTS:-}
bgzip -c -b 65272 -s 5 /tmp/oCV2h3_G_a/bgzip.dat.gz
.. ok

bgzip -c -b 979200 -s 6 /tmp/oCV2h3_G_a/bgzip.dat.gz
.. ok

bgzip -c -b 652804 -s 6 /tmp/oCV2h3_G_a/bgzip.dat.gz
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa 3:11-13 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa.gz 3:11-13 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa 2:998-1003 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa.gz 2:998-1003 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa 1:100-104 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa.gz 1:100-104 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa 1:99998-100007 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/oCV2h3_G_a/faidx.fa.gz 1:99998-100007 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq 3:11-13
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq.gz 3:11-13
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq 2:998-1003
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq.gz 2:998-1003
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq 1:100-104
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq.gz 1:100-104
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq 1:99998-100007
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/oCV2h3_G_a/fqidx.fq.gz 1:99998-100007
.. ok

.. ok

test_dict:
	/builddir/build/BUILD/samtools-1.15.1/samtools dict -a hf37d5 -s 'Homo floresiensis' -u ftp://example.com/hf37d5.fa.gz /builddir/build/BUILD/samtools-1.15.1/test/dat/dict.fa
.. ok

test_dict:
	/builddir/build/BUILD/samtools-1.15.1/samtools dict -a hf37d5 -s 'Homo floresiensis' -u ftp://example.com/hf37d5.fa.gz /tmp/oCV2h3_G_a/dict.fa.gz
.. ok

test_dict:
	cat /builddir/build/BUILD/samtools-1.15.1/test/dat/dict.fa | /builddir/build/BUILD/samtools-1.15.1/samtools dict -a hf37d5 -s 'Homo floresiensis' -u ftp://example.com/hf37d5.fa.gz
.. ok

test_dict:
	/builddir/build/BUILD/samtools-1.15.1/samtools dict -AH < /builddir/build/BUILD/samtools-1.15.1/test/dat/dict.alias.fa
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view /tmp/oCV2h3_G_a/large_chrom.bam ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view /tmp/oCV2h3_G_a/large_chrom.bam ref2:1-541556283
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam && cat /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -X /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /tmp/oCV2h3_G_a/test_input_1_b.bam.bai ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -O sam - -X -cp -R ref2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai /tmp/oCV2h3_G_a/test_input_1_b.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.bam /tmp/oCV2h3_G_a/auto_indexed.csi && cat /tmp/oCV2h3_G_a/auto_indexed.csi
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.cram /tmp/oCV2h3_G_a/auto_indexed.crai && cat /tmp/oCV2h3_G_a/auto_indexed.crai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.sam /tmp/oCV2h3_G_a/auto_indexed.csi && cat /tmp/oCV2h3_G_a/auto_indexed.csi
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -@ 2 /tmp/oCV2h3_G_a/large_chrom.bam ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -@ 2 /tmp/oCV2h3_G_a/large_chrom.bam ref2:1-541556283
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam && cat /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -@ 2 -X /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /tmp/oCV2h3_G_a/test_input_1_b.bam.bai ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -O sam - -X -cp -R ref2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai /tmp/oCV2h3_G_a/test_input_1_b.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.bam /tmp/oCV2h3_G_a/auto_indexed.csi && cat /tmp/oCV2h3_G_a/auto_indexed.csi
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.cram /tmp/oCV2h3_G_a/auto_indexed.crai && cat /tmp/oCV2h3_G_a/auto_indexed.crai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.sam /tmp/oCV2h3_G_a/auto_indexed.csi && cat /tmp/oCV2h3_G_a/auto_indexed.csi
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/oCV2h3_G_a/mpileup.bam.list -f /tmp/oCV2h3_G_a/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/oCV2h3_G_a/mpileup.cram.list -f /tmp/oCV2h3_G_a/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/oCV2h3_G_a/mpileup.bam.urllist -f /tmp/oCV2h3_G_a/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/oCV2h3_G_a/mpileup.cram.urllist -f /tmp/oCV2h3_G_a/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -B --ff 0x14 -f /tmp/oCV2h3_G_a/mpileup.ref.fa.gz -r17:1050-1060 /tmp/oCV2h3_G_a/mpileup.1.bam | grep -v mpileup
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -B --ff 0x14 -f /tmp/oCV2h3_G_a/mpileup.ref.fa.gz -r17:1050-1060 /tmp/oCV2h3_G_a/mpileup.1.cram | grep -v mpileup
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup /builddir/build/BUILD/samtools-1.15.1/test/mpileup/overlap.bam | grep 128814202
test/test.pl: no IO::Pty module or can't open pty; skipping usage tests
.. ok

test_usage:
	samtools
test_view:
	Generating test data file .................. done
	1: SAM -> BAM -> SAM                                        .. ok

	2: SAM -> uncompressed BAM                                  .. ok

	3: uncompressed BAM -> SAM and compare                      .. ok

	4: SAM -> fast compressed BAM                               .. ok

	5: fast compressed BAM -> SAM and compare                   .. ok

	6: SAM -> CRAM -> SAM (UR header tags)                      .. ok

	7: SAM -> CRAM -> SAM (M5 header tags)                      .. ok

	8: BAM -> CRAM with UR -> SAM                               .. ok

	9: SAM -> BAM (M5 header tags)                              .. ok

	10: SAM -> BAM -> CRAM -> SAM (M5 header tags)              .. ok

	11: CRAM -> BAM with UR                                     .. ok

	12: CRAM -> BAM with M5                                     .. ok

	13: SAM -> SAM via stdout                                   .. ok

	14: SAM -> BAM via stdout                                   .. ok

	15: SAM -> CRAM via stdout                                  .. ok

	16: SAM from stdin -> SAM                                   .. ok

	17: BAM from stdin -> SAM                                   .. ok

	18: CRAM from stdin -> SAM                                  .. ok

	19: samtools view -H (SAM input)                            .. ok

	20: samtools view -H (BAM input)                            .. ok

	21: samtools view -H (CRAM input)                           .. ok

	22: No headers (SAM input)                                  .. ok

	23: No headers (BAM input)                                  .. ok

	24: No headers (CRAM input)                                 .. ok

	25: Filter -f 128 (SAM input)                               .. ok

	26: Count -f 128 (SAM input)                                .. ok

	27: Filter -f 128 (BAM input)                               .. ok

	28: Count -f 128 (BAM input)                                .. ok

	29: Filter -f 128 (CRAM input)                              .. ok

	30: Count -f 128 (CRAM input)                               .. ok

	31: Filter -F 128 (SAM input)                               .. ok

	32: Count -F 128 (SAM input)                                .. ok

	33: Filter -F 128 (BAM input)                               .. ok

	34: Count -F 128 (BAM input)                                .. ok

	35: Filter -F 128 (CRAM input)                              .. ok

	36: Count -F 128 (CRAM input)                               .. ok

	37: Filter -F 128 -f 2 (SAM input)                          .. ok

	38: Count -F 128 -f 2 (SAM input)                           .. ok

	39: Filter -F 128 -f 2 (BAM input)                          .. ok

	40: Count -F 128 -f 2 (BAM input)                           .. ok

	41: Filter -F 128 -f 2 (CRAM input)                         .. ok

	42: Count -F 128 -f 2 (CRAM input)                          .. ok

	43: Filter -r grp2 (SAM input)                              .. ok

	44: Count -r grp2 (SAM input)                               .. ok

	45: Filter -r grp2 (BAM input)                              .. ok

	46: Count -r grp2 (BAM input)                               .. ok

	47: Filter -r grp2 (CRAM input)                             .. ok

	48: Count -r grp2 (CRAM input)                              .. ok

	49: Filter -R /tmp/oCV2h3_G_a/view.001.fogn (SAM input)     .. ok

	50: Count -R /tmp/oCV2h3_G_a/view.001.fogn (SAM input)      .. ok

	51: Filter -R /tmp/oCV2h3_G_a/view.001.fogn (BAM input)     .. ok

	52: Count -R /tmp/oCV2h3_G_a/view.001.fogn (BAM input)      .. ok

	53: Filter -R /tmp/oCV2h3_G_a/view.001.fogn (CRAM input)    .. ok

	54: Count -R /tmp/oCV2h3_G_a/view.001.fogn (CRAM input)     .. ok

	55: Filter -R /tmp/oCV2h3_G_a/view.001.fogn -r grp2 (SAM input).. ok

	56: Count -R /tmp/oCV2h3_G_a/view.001.fogn -r grp2 (SAM input).. ok

	57: Filter -R /tmp/oCV2h3_G_a/view.001.fogn -r grp2 (BAM input).. ok

	58: Count -R /tmp/oCV2h3_G_a/view.001.fogn -r grp2 (BAM input).. ok

	59: Filter -R /tmp/oCV2h3_G_a/view.001.fogn -r grp2 (CRAM input).. ok

	60: Count -R /tmp/oCV2h3_G_a/view.001.fogn -r grp2 (CRAM input).. ok

	61: Filter -r grp2 -R /tmp/oCV2h3_G_a/view.001.fogn (SAM input).. ok

	62: Count -r grp2 -R /tmp/oCV2h3_G_a/view.001.fogn (SAM input).. ok

	63: Filter -r grp2 -R /tmp/oCV2h3_G_a/view.001.fogn (BAM input).. ok

	64: Count -r grp2 -R /tmp/oCV2h3_G_a/view.001.fogn (BAM input).. ok

	65: Filter -r grp2 -R /tmp/oCV2h3_G_a/view.001.fogn (CRAM input).. ok

	66: Count -r grp2 -R /tmp/oCV2h3_G_a/view.001.fogn (CRAM input).. ok

	67: Filter -N /tmp/oCV2h3_G_a/view.001.forn (SAM input)     .. ok

	68: Count -N /tmp/oCV2h3_G_a/view.001.forn (SAM input)      .. ok

	69: Filter -N /tmp/oCV2h3_G_a/view.001.forn (BAM input)     .. ok

	70: Count -N /tmp/oCV2h3_G_a/view.001.forn (BAM input)      .. ok

	71: Filter -N /tmp/oCV2h3_G_a/view.001.forn (CRAM input)    .. ok

	72: Count -N /tmp/oCV2h3_G_a/view.001.forn (CRAM input)     .. ok

	73: Filter -d BC (SAM input)                                .. ok

	74: Count -d BC (SAM input)                                 .. ok

	75: Filter -d BC (BAM input)                                .. ok

	76: Count -d BC (BAM input)                                 .. ok

	77: Filter -d BC (CRAM input)                               .. ok

	78: Count -d BC (CRAM input)                                .. ok

	79: Filter -d BC:TGCA (SAM input)                           .. ok

	80: Count -d BC:TGCA (SAM input)                            .. ok

	81: Filter -d BC:TGCA (BAM input)                           .. ok

	82: Count -d BC:TGCA (BAM input)                            .. ok

	83: Filter -d BC:TGCA (CRAM input)                          .. ok

	84: Count -d BC:TGCA (CRAM input)                           .. ok

	85: Filter -D BC:/tmp/oCV2h3_G_a/view.001.fobc (SAM input)  .. ok

	86: Count -D BC:/tmp/oCV2h3_G_a/view.001.fobc (SAM input)   .. ok

	87: Filter -D BC:/tmp/oCV2h3_G_a/view.001.fobc (BAM input)  .. ok

	88: Count -D BC:/tmp/oCV2h3_G_a/view.001.fobc (BAM input)   .. ok

	89: Filter -D BC:/tmp/oCV2h3_G_a/view.001.fobc (CRAM input) .. ok

	90: Count -D BC:/tmp/oCV2h3_G_a/view.001.fobc (CRAM input)  .. ok

	91: Filter -D BC:/tmp/oCV2h3_G_a/view.001.fobc -d BC:TGCA (SAM input).. ok

	92: Count -D BC:/tmp/oCV2h3_G_a/view.001.fobc -d BC:TGCA (SAM input).. ok

	93: Filter -D BC:/tmp/oCV2h3_G_a/view.001.fobc -d BC:TGCA (BAM input).. ok

	94: Count -D BC:/tmp/oCV2h3_G_a/view.001.fobc -d BC:TGCA (BAM input).. ok

	95: Filter -D BC:/tmp/oCV2h3_G_a/view.001.fobc -d BC:TGCA (CRAM input).. ok

	96: Count -D BC:/tmp/oCV2h3_G_a/view.001.fobc -d BC:TGCA (CRAM input).. ok

	97: Filter -d BC:TGCA -D BC:/tmp/oCV2h3_G_a/view.001.fobc (SAM input).. ok

	98: Count -d BC:TGCA -D BC:/tmp/oCV2h3_G_a/view.001.fobc (SAM input).. ok

	99: Filter -d BC:TGCA -D BC:/tmp/oCV2h3_G_a/view.001.fobc (BAM input).. ok

	100: Count -d BC:TGCA -D BC:/tmp/oCV2h3_G_a/view.001.fobc (BAM input).. ok

	101: Filter -d BC:TGCA -D BC:/tmp/oCV2h3_G_a/view.001.fobc (CRAM input).. ok

	102: Count -d BC:TGCA -D BC:/tmp/oCV2h3_G_a/view.001.fobc (CRAM input).. ok

	103: Filter -D RG:/tmp/oCV2h3_G_a/view.001.fogn (SAM input) .. ok

	104: Count -D RG:/tmp/oCV2h3_G_a/view.001.fogn (SAM input)  .. ok

	105: Filter -D RG:/tmp/oCV2h3_G_a/view.001.fogn (BAM input) .. ok

	106: Count -D RG:/tmp/oCV2h3_G_a/view.001.fogn (BAM input)  .. ok

	107: Filter -D RG:/tmp/oCV2h3_G_a/view.001.fogn (CRAM input).. ok

	108: Count -D RG:/tmp/oCV2h3_G_a/view.001.fogn (CRAM input) .. ok

	109: Filter -d NE:TGCA (SAM input)                          .. ok

	110: Count -d NE:TGCA (SAM input)                           .. ok

	111: Filter -d NE:TGCA (BAM input)                          .. ok

	112: Count -d NE:TGCA (BAM input)                           .. ok

	113: Filter -d NE:TGCA (CRAM input)                         .. ok

	114: Count -d NE:TGCA (CRAM input)                          .. ok

	115: Filter -d TGCA (SAM input)                             samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test115.sam -h -d TGCA /tmp/oCV2h3_G_a/view.001.sam --no-PG


.. expected failure

	116: Count -d TGCA (SAM input)                              samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d TGCA /tmp/oCV2h3_G_a/view.001.sam --no-PG


.. expected failure

	117: Filter -d TGCA (BAM input)                             samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test117.sam -h -d TGCA /tmp/oCV2h3_G_a/view.test001.bam --no-PG


.. expected failure

	118: Count -d TGCA (BAM input)                              samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d TGCA /tmp/oCV2h3_G_a/view.test001.bam --no-PG


.. expected failure

	119: Filter -d TGCA (CRAM input)                            samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test119.sam -h -d TGCA /tmp/oCV2h3_G_a/view.test006.cram --no-PG


.. expected failure

	120: Count -d TGCA (CRAM input)                             samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d TGCA /tmp/oCV2h3_G_a/view.test006.cram --no-PG


.. expected failure

	121: Filter -D BClong:/tmp/oCV2h3_G_a/view.001.fobc (SAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/oCV2h3_G_a/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test121.sam -h -D BClong:/tmp/oCV2h3_G_a/view.001.fobc /tmp/oCV2h3_G_a/view.001.sam --no-PG


.. expected failure

	122: Count -D BClong:/tmp/oCV2h3_G_a/view.001.fobc (SAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/oCV2h3_G_a/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -D BClong:/tmp/oCV2h3_G_a/view.001.fobc /tmp/oCV2h3_G_a/view.001.sam --no-PG


.. expected failure

	123: Filter -D BClong:/tmp/oCV2h3_G_a/view.001.fobc (BAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/oCV2h3_G_a/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test123.sam -h -D BClong:/tmp/oCV2h3_G_a/view.001.fobc /tmp/oCV2h3_G_a/view.test001.bam --no-PG


.. expected failure

	124: Count -D BClong:/tmp/oCV2h3_G_a/view.001.fobc (BAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/oCV2h3_G_a/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -D BClong:/tmp/oCV2h3_G_a/view.001.fobc /tmp/oCV2h3_G_a/view.test001.bam --no-PG


.. expected failure

	125: Filter -D BClong:/tmp/oCV2h3_G_a/view.001.fobc (CRAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/oCV2h3_G_a/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test125.sam -h -D BClong:/tmp/oCV2h3_G_a/view.001.fobc /tmp/oCV2h3_G_a/view.test006.cram --no-PG


.. expected failure

	126: Count -D BClong:/tmp/oCV2h3_G_a/view.001.fobc (CRAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/oCV2h3_G_a/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -D BClong:/tmp/oCV2h3_G_a/view.001.fobc /tmp/oCV2h3_G_a/view.test006.cram --no-PG


.. expected failure

	127: Filter -d BC:ACGT -d RG:grp2 (SAM input)               samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test127.sam -h -d BC:ACGT -d RG:grp2 /tmp/oCV2h3_G_a/view.001.sam --no-PG


.. expected failure

	128: Count -d BC:ACGT -d RG:grp2 (SAM input)                samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d BC:ACGT -d RG:grp2 /tmp/oCV2h3_G_a/view.001.sam --no-PG


.. expected failure

	129: Filter -d BC:ACGT -d RG:grp2 (BAM input)               samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test129.sam -h -d BC:ACGT -d RG:grp2 /tmp/oCV2h3_G_a/view.test001.bam --no-PG


.. expected failure

	130: Count -d BC:ACGT -d RG:grp2 (BAM input)                samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d BC:ACGT -d RG:grp2 /tmp/oCV2h3_G_a/view.test001.bam --no-PG


.. expected failure

	131: Filter -d BC:ACGT -d RG:grp2 (CRAM input)              samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/oCV2h3_G_a/view.test131.sam -h -d BC:ACGT -d RG:grp2 /tmp/oCV2h3_G_a/view.test006.cram --no-PG


.. expected failure

	132: Count -d BC:ACGT -d RG:grp2 (CRAM input)               samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d BC:ACGT -d RG:grp2 /tmp/oCV2h3_G_a/view.test006.cram --no-PG


.. expected failure

	133: Filter -d NM:13 (SAM input)                            .. ok

	134: Count -d NM:13 (SAM input)                             .. ok

	135: Filter -d NM:13 (BAM input)                            .. ok

	136: Count -d NM:13 (BAM input)                             .. ok

	137: Filter -d NM:13 (CRAM input)                           .. ok

	138: Count -d NM:13 (CRAM input)                            .. ok

	139: Filter -d ab:z (SAM input)                             .. ok

	140: Count -d ab:z (SAM input)                              .. ok

	141: Filter -d ab:z (BAM input)                             .. ok

	142: Count -d ab:z (BAM input)                              .. ok

	143: Filter -d ab:z (CRAM input)                            .. ok

	144: Count -d ab:z (CRAM input)                             .. ok

	145: Filter -l Library 2 (SAM input)                        .. ok

	146: Count -l Library 2 (SAM input)                         .. ok

	147: Filter -l Library 2 (BAM input)                        .. ok

	148: Count -l Library 2 (BAM input)                         .. ok

	149: Filter -l Library 2 (CRAM input)                       .. ok

	150: Count -l Library 2 (CRAM input)                        .. ok

	151: Filter -l Library 3 (SAM input)                        .. ok

	152: Count -l Library 3 (SAM input)                         .. ok

	153: Filter -l Library 3 (BAM input)                        .. ok

	154: Count -l Library 3 (BAM input)                         .. ok

	155: Filter -l Library 3 (CRAM input)                       .. ok

	156: Count -l Library 3 (CRAM input)                        .. ok

	157: Filter -q 50 (SAM input)                               .. ok

	158: Count -q 50 (SAM input)                                .. ok

	159: Filter -q 50 (BAM input)                               .. ok

	160: Count -q 50 (BAM input)                                .. ok

	161: Filter -q 50 (CRAM input)                              .. ok

	162: Count -q 50 (CRAM input)                               .. ok

	163: Filter -q 99 (SAM input)                               .. ok

	164: Count -q 99 (SAM input)                                .. ok

	165: Filter -q 99 (BAM input)                               .. ok

	166: Count -q 99 (BAM input)                                .. ok

	167: Filter -q 99 (CRAM input)                              .. ok

	168: Count -q 99 (CRAM input)                               .. ok

	169: Filter -q 100 (SAM input)                              .. ok

	170: Count -q 100 (SAM input)                               .. ok

	171: Filter -q 100 (BAM input)                              .. ok

	172: Count -q 100 (BAM input)                               .. ok

	173: Filter -q 100 (CRAM input)                             .. ok

	174: Count -q 100 (CRAM input)                              .. ok

	175: Filter -x fa (SAM input)                               .. ok

	176: Count -x fa (SAM input)                                .. ok

	177: Filter -x fa (BAM input)                               .. ok

	178: Count -x fa (BAM input)                                .. ok

	179: Filter -x fa (CRAM input)                              .. ok

	180: Count -x fa (CRAM input)                               .. ok

	181: Filter -x fa -x ha (SAM input)                         .. ok

	182: Count -x fa -x ha (SAM input)                          .. ok

	183: Filter -x fa -x ha (BAM input)                         .. ok

	184: Count -x fa -x ha (BAM input)                          .. ok

	185: Filter -x fa -x ha (CRAM input)                        .. ok

	186: Count -x fa -x ha (CRAM input)                         .. ok

	187: Filter -x fa,ha (SAM input)                            .. ok

	188: Count -x fa,ha (SAM input)                             .. ok

	189: Filter -x fa,ha (BAM input)                            .. ok

	190: Count -x fa,ha (BAM input)                             .. ok

	191: Filter -x fa,ha (CRAM input)                           .. ok

	192: Count -x fa,ha (CRAM input)                            .. ok

	193: Filter -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	194: Count -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	195: Filter -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	196: Count -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	197: Filter -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	198: Count -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	199: Filter --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	200: Count --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	201: Filter --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	202: Count --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	203: Filter --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	204: Count --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	205: Filter -x fa -r grp2 (SAM input)                       .. ok

	206: Count -x fa -r grp2 (SAM input)                        .. ok

	207: Filter -x fa -r grp2 (BAM input)                       .. ok

	208: Count -x fa -r grp2 (BAM input)                        .. ok

	209: Filter -x fa -r grp2 (CRAM input)                      .. ok

	210: Count -x fa -r grp2 (CRAM input)                       .. ok

	211: Filter -x RG -r grp2 (SAM input)                       .. ok

	212: Count -x RG -r grp2 (SAM input)                        .. ok

	213: Filter -x RG -r grp2 (BAM input)                       .. ok

	214: Count -x RG -r grp2 (BAM input)                        .. ok

	215: Filter -x RG -r grp2 (CRAM input)                      .. ok

	216: Count -x RG -r grp2 (CRAM input)                       .. ok

	217: Filter -m 10 (SAM input)                               .. ok

	218: Count -m 10 (SAM input)                                .. ok

	219: Filter -m 10 (BAM input)                               .. ok

	220: Count -m 10 (BAM input)                                .. ok

	221: Filter -m 10 (CRAM input)                              .. ok

	222: Count -m 10 (CRAM input)                               .. ok

	223: Filter -m 11 (SAM input)                               .. ok

	224: Count -m 11 (SAM input)                                .. ok

	225: Filter -m 11 (BAM input)                               .. ok

	226: Count -m 11 (BAM input)                                .. ok

	227: Filter -m 11 (CRAM input)                              .. ok

	228: Count -m 11 (CRAM input)                               .. ok

	229: Filter -m 15 (SAM input)                               .. ok

	230: Count -m 15 (SAM input)                                .. ok

	231: Filter -m 15 (BAM input)                               .. ok

	232: Count -m 15 (BAM input)                                .. ok

	233: Filter -m 15 (CRAM input)                              .. ok

	234: Count -m 15 (CRAM input)                               .. ok

	235: Filter -m 16 (SAM input)                               .. ok

	236: Count -m 16 (SAM input)                                .. ok

	237: Filter -m 16 (BAM input)                               .. ok

	238: Count -m 16 (BAM input)                                .. ok

	239: Filter -m 16 (CRAM input)                              .. ok

	240: Count -m 16 (CRAM input)                               .. ok

	241: Filter -e !(flag & 128) && (flag & 2) (SAM input)      .. ok

	242: Count -e !(flag & 128) && (flag & 2) (SAM input)       .. ok

	243: Filter -e !(flag & 128) && (flag & 2) (BAM input)      .. ok

	244: Count -e !(flag & 128) && (flag & 2) (BAM input)       .. ok

	245: Filter -e !(flag & 128) && (flag & 2) (CRAM input)     .. ok

	246: Count -e !(flag & 128) && (flag & 2) (CRAM input)      .. ok

	247: Filter -e [BC] (SAM input)                             .. ok

	248: Count -e [BC] (SAM input)                              .. ok

	249: Filter -e [BC] (BAM input)                             .. ok

	250: Count -e [BC] (BAM input)                              .. ok

	251: Filter -e [BC] (CRAM input)                            .. ok

	252: Count -e [BC] (CRAM input)                             .. ok

	253: Filter -e [BC] == "ACGT" || [BC] == "AATTCCGG" (SAM input).. ok

	254: Count -e [BC] == "ACGT" || [BC] == "AATTCCGG" (SAM input).. ok

	255: Filter -e [BC] == "ACGT" || [BC] == "AATTCCGG" (BAM input).. ok

	256: Count -e [BC] == "ACGT" || [BC] == "AATTCCGG" (BAM input).. ok

	257: Filter -e [BC] == "ACGT" || [BC] == "AATTCCGG" (CRAM input).. ok

	258: Count -e [BC] == "ACGT" || [BC] == "AATTCCGG" (CRAM input).. ok

	259: Filter -e mapq >= 50 (SAM input)                       .. ok

	260: Count -e mapq >= 50 (SAM input)                        .. ok

	261: Filter -e mapq >= 50 (BAM input)                       .. ok

	262: Count -e mapq >= 50 (BAM input)                        .. ok

	263: Filter -e mapq >= 50 (CRAM input)                      .. ok

	264: Count -e mapq >= 50 (CRAM input)                       .. ok

	265: Filter -e mapq >= 99 (SAM input)                       .. ok

	266: Count -e mapq >= 99 (SAM input)                        .. ok

	267: Filter -e mapq >= 99 (BAM input)                       .. ok

	268: Count -e mapq >= 99 (BAM input)                        .. ok

	269: Filter -e mapq >= 99 (CRAM input)                      .. ok

	270: Count -e mapq >= 99 (CRAM input)                       .. ok

	271: Filter -e mapq >= 100 (SAM input)                      .. ok

	272: Count -e mapq >= 100 (SAM input)                       .. ok

	273: Filter -e mapq >= 100 (BAM input)                      .. ok

	274: Count -e mapq >= 100 (BAM input)                       .. ok

	275: Filter -e mapq >= 100 (CRAM input)                     .. ok

	276: Count -e mapq >= 100 (CRAM input)                      .. ok

	277: 1bp reads file SAM -> BAM -> SAM                       .. ok

	278: 1bp reads file SAM -> CRAM -> SAM                      .. ok

	278: Region  Z (BAM input)                                  .. ok

	279: Count  Z (BAM input)                                   .. ok

	280: Region  Z (CRAM input)                                 .. ok

	281: Count  Z (CRAM input)                                  .. ok

	282: Region  Z:30 (BAM input)                               .. ok

	283: Count  Z:30 (BAM input)                                .. ok

	284: Region  Z:30 (CRAM input)                              .. ok

	285: Count  Z:30 (CRAM input)                               .. ok

	286: Region  Z:20-40 (BAM input)                            .. ok

	287: Count  Z:20-40 (BAM input)                             .. ok

	288: Region  Z:20-40 (CRAM input)                           .. ok

	289: Count  Z:20-40 (CRAM input)                            .. ok

	290: Region  ref1 (BAM input)                               .. ok

	291: Count  ref1 (BAM input)                                .. ok

	292: Region  ref1 (CRAM input)                              .. ok

	293: Count  ref1 (CRAM input)                               .. ok

	294: Region  ref1:15 (BAM input)                            .. ok

	295: Count  ref1:15 (BAM input)                             .. ok

	296: Region  ref1:15 (CRAM input)                           .. ok

	297: Count  ref1:15 (CRAM input)                            .. ok

	298: Region  ref1:15-45 (BAM input)                         .. ok

	299: Count  ref1:15-45 (BAM input)                          .. ok

	300: Region  ref1:15-45 (CRAM input)                        .. ok

	301: Count  ref1:15-45 (CRAM input)                         .. ok

	302: Region  ref1:15-45 ref2 (BAM input)                    .. ok

	303: Count  ref1:15-45 ref2 (BAM input)                     .. ok

	304: Region  ref1:15-45 ref2 (CRAM input)                   .. ok

	305: Count  ref1:15-45 ref2 (CRAM input)                    .. ok

	306: Region  ref1:15-45 ref2:16 (BAM input)                 .. ok

	307: Count  ref1:15-45 ref2:16 (BAM input)                  .. ok

	308: Region  ref1:15-45 ref2:16 (CRAM input)                .. ok

	309: Count  ref1:15-45 ref2:16 (CRAM input)                 .. ok

	310: Region  ref1:15-45 ref2:16-31 (BAM input)              .. ok

	311: Count  ref1:15-45 ref2:16-31 (BAM input)               .. ok

	312: Region  ref1:15-45 ref2:16-31 (CRAM input)             .. ok

	313: Count  ref1:15-45 ref2:16-31 (CRAM input)              .. ok

	314: Region  ref1:15-15 ref1:45-45 (BAM input)              .. ok

	315: Count  ref1:15-15 ref1:45-45 (BAM input)               .. ok

	316: Region  ref1:15-15 ref1:45-45 (CRAM input)             .. ok

	317: Count  ref1:15-15 ref1:45-45 (CRAM input)              .. ok

	318: Region -f 128 ref1 (BAM input)                         .. ok

	319: Count -f 128 ref1 (BAM input)                          .. ok

	320: Region -f 128 ref1 (CRAM input)                        .. ok

	321: Count -f 128 ref1 (CRAM input)                         .. ok

	322: Region -q 50 ref1:15-45 (BAM input)                    .. ok

	323: Count -q 50 ref1:15-45 (BAM input)                     .. ok

	324: Region -q 50 ref1:15-45 (CRAM input)                   .. ok

	325: Count -q 50 ref1:15-45 (CRAM input)                    .. ok

	326: Region -r grp2 ref1:15-45 (BAM input)                  .. ok

	327: Count -r grp2 ref1:15-45 (BAM input)                   .. ok

	328: Region -r grp2 ref1:15-45 (CRAM input)                 .. ok

	329: Count -r grp2 ref1:15-45 (CRAM input)                  .. ok

	330: Region  * (BAM input)                                  .. ok

	331: Count  * (BAM input)                                   .. ok

	332: Region  * (CRAM input)                                 .. ok

	333: Count  * (CRAM input)                                  .. ok

	334: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (BAM input).. ok

	335: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (BAM input).. ok

	336: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (CRAM input).. ok

	337: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (CRAM input).. ok

	338: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (BAM input).. ok

	339: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (BAM input).. ok

	340: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (CRAM input).. ok

	341: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (CRAM input).. ok

	342: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (BAM input).. ok

	343: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (BAM input).. ok

	344: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (CRAM input).. ok

	345: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (CRAM input).. ok

	346: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (BAM input).. ok

	347: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (BAM input).. ok

	348: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (CRAM input).. ok

	349: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (CRAM input).. ok

	350: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (BAM input).. ok

	351: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (BAM input).. ok

	352: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (CRAM input).. ok

	353: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (CRAM input).. ok

	354: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (BAM input).. ok

	355: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (BAM input).. ok

	356: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (CRAM input).. ok

	357: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (CRAM input).. ok

	358: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (BAM input).. ok

	359: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (BAM input).. ok

	360: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (CRAM input).. ok

	361: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (CRAM input).. ok

	362: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (BAM input).. ok

	363: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (BAM input).. ok

	364: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (CRAM input).. ok

	365: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (CRAM input).. ok

	366: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (BAM input).. ok

	367: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (BAM input).. ok

	368: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (CRAM input).. ok

	369: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (CRAM input).. ok

	370: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (BAM input).. ok

	371: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (BAM input).. ok

	372: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (CRAM input).. ok

	373: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (CRAM input).. ok

	374: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (BAM input).. ok

	375: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (BAM input).. ok

	376: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (CRAM input).. ok

	377: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (CRAM input).. ok

	378: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (BAM input).. ok

	379: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (BAM input).. ok

	380: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (CRAM input).. ok

	381: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (CRAM input).. ok

	382: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (BAM input).. ok

	383: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (BAM input).. ok

	384: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (CRAM input).. ok

	385: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (CRAM input).. ok

	386: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (BAM input).. ok

	387: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (BAM input).. ok

	388: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (CRAM input).. ok

	389: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (CRAM input).. ok

	390: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (BAM input).. ok

	391: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (BAM input).. ok

	392: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (CRAM input).. ok

	393: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (CRAM input).. ok

	394: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (BAM input).. ok

	395: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (BAM input).. ok

	396: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (CRAM input).. ok

	397: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (CRAM input).. ok

	398: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (BAM input).. ok

	399: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (BAM input).. ok

	400: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (CRAM input).. ok

	401: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (CRAM input).. ok

	402: Make BAM with no M5/UR tags                            .. ok

	403: Add @SQ with -t (SAM -> SAM)                           .. ok

	404: Add @SQ with -T (SAM -> SAM)                           .. ok

	405: Add @SQ with -t (BAM -> SAM)                           .. ok

	406: Add @SQ with -T (BAM -> SAM)                           .. ok

	407: Add @SQ with -t (SAM -> BAM)                           .. ok

	408: Add @SQ with -T (SAM -> BAM)                           .. ok

	409: Add @SQ with -t (BAM -> BAM)                           .. ok

	410: Add @SQ with -T (BAM -> BAM)                           .. ok

	411: Add @SQ with -t (SAM -> CRAM)                          .. ok

	412: Add @SQ with -T (SAM -> CRAM)                          .. ok

	413: Add @SQ with -t (BAM -> CRAM)                          .. ok

	414: Add @SQ with -T (BAM -> CRAM)                          .. ok

	415: Make CRAM with no UR field                             .. ok

	416: Decoding CRAM with no UR field via -T                  .. ok

	417: CIGAR B-operator removal                               .. ok

	418: Big SAM -> BAM                                         .. ok

	419: Big SAM -> BAM (2 threads)                             .. ok

	420: Big SAM -> BAM (4 threads)                             .. ok

	421: Big SAM -> CRAM                                        .. ok

	422: Big SAM -> CRAM (2 threads)                            .. ok

	423: Big SAM -> CRAM (4 threads)                            .. ok

	424: Subsample 0.2 (SAM input) ............ ok

	425: Subsample 0.5 (SAM input) ............ ok

	426: Subsample 0.8 (SAM input) ............ ok

	427: Subsample 0.2 (BAM input) ............ ok

	428: Subsample 0.5 (BAM input) ............ ok

	429: Subsample 0.8 (BAM input) ............ ok

	430: Subsample 0.2 (CRAM input) ............ ok

	431: Subsample 0.5 (CRAM input) ............ ok

	432: Subsample 0.8 (CRAM input) ............ ok

	433: SAM add PG                                             .. ok

	434: Unset dup flag, remove dt and do tags                  .. ok

	435: Unmap dup flagged reads.                               .. ok

	436: Unmap dup flagged reads.                               .. ok

	437: fetch pairs                                            .. ok

	438: fetch pairs                                            .. ok

	439: fetch pairs                                            .. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 0 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 1 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 5 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 29 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 30 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -n 0 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -n 1 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -n 5 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 5 -n 5 < /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_cat:
	Generating test data file .................. done
	Generate BAM file #1                                        .. ok

	Generate CRAM file #1                                       .. ok

	Generating test data file .................. done
	Generate BAM file #2                                        .. ok

	Generate CRAM file #2                                       .. ok

	Generating test data file .................. done
	Generate BAM file #3                                        .. ok

	Generate CRAM file #3                                       .. ok

	Generating test data file .................. done
	Generate BAM file #4                                        .. ok

	Generate CRAM file #4                                       .. ok

	1: cat BAM files                                            .. ok

	2: cat recompressed BAM files                               .. ok

	3: cat CRAM files                                           .. ok

	4: cat BAM files to stdout                                  .. ok

	5: cat recompressed BAM files to stdout                     .. ok

	6: cat CRAM files to stdout                                 .. ok

	7: cat BAM files with new header                            .. ok

	8: cat recompressed BAM files with new header               .. ok

	9: cat CRAM files with new header                           .. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -0 test/bam2fq/1.1.fq.expected  | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -s test/bam2fq/1.1.fq.expected  | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -s test/bam2fq/5.s.fq.expected  | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/5.1.fq.expected test/bam2fq/5.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -N -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -i -1 test/bam2fq/12.1.fq.expected -2 test/bam2fq/12.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -i --index-format 'i*i*' -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import --barcode-tag OX -i -1 test/bam2fq/12.1.fq.expected -2 test/bam2fq/12.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq --barcode-tag OX -i --index-format 'i*i*' -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -T "" -1 test/bam2fq/6.1.fq.expected -2 test/bam2fq/6.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -N -T RG,BC,QT -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -T "*" -1 test/bam2fq/7.1.fq.expected -2 test/bam2fq/7.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -N -T RG,BC,QT,MD,ia -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected -R rgid
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected -r ID:rgid
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected -r '@RG	ID:rgid'
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/2.interleaved.fq -T ""
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/3.interleaved.fq -i
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/4.aux.fq -T "*"
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/4.aux.fq -T ""
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/4.aux.fq -T XZ,XA,AA
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import --i1 test/import/5-i1.fq --i2  test/import/5-i2.fq --r1 test/import/5-r1.fq --r2 test/import/5-r2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import --i1 test/import/5-i1.fq --i2  test/import/5-i2.fq --r1 test/import/5-r1.fq --r2 test/import/5-r2.fq --barcode-tag OX --quality-tag BZ
.. ok

test_bam2fq:
	Generate BAM file                                           .. ok

	Generate CRAM file                                          .. ok

	1: fastq  (SAM input)                                       [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	2: fastq -n (SAM input)                                     [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	3: fastq  (BAM input)                                       [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	4: fastq -n (BAM input)                                     [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	5: fastq  (CRAM input)                                      [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	6: fastq -n (CRAM input)                                    [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.002.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.003.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.010.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -N --index-format 'n*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc_split.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -t -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -t -T MD,ia -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -i --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -i --index-format 'i*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -i --index-format 'i*i*' -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.703.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fasta  -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fa -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fa /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -o /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -s /tmp/oCV2h3_G_a/bam2fq.discard.s.fq -0 /tmp/oCV2h3_G_a/bam2fq.discard.0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -T ba,bb,bc,bd,be,bf,bg /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.013.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --index-format 'i8n1i8' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i1.fq --i2 /builddir/build/BUILD/samtools-1.15.1/test/i2.fq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.014.sam
.. ok

test_bam2fq:
	Generate BAM file (2 threads)                               .. ok

	Generate CRAM file (2 threads)                              .. ok

	1: fastq  (SAM input) (2 threads)                           [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	2: fastq -n (SAM input) (2 threads)                         [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	3: fastq  (BAM input) (2 threads)                           [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	4: fastq -n (BAM input) (2 threads)                         [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	5: fastq  (CRAM input) (2 threads)                          [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	6: fastq -n (CRAM input) (2 threads)                        [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.002.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.003.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.010.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -N --index-format 'n*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc_split.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -t -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -t -T MD,ia -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -i --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -i --index-format 'i*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -i --index-format 'i*i*' -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.703.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fasta -@ 2 -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fa -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fa /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -o /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -s /tmp/oCV2h3_G_a/bam2fq.discard.s.fq -0 /tmp/oCV2h3_G_a/bam2fq.discard.0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -T ba,bb,bc,bd,be,bf,bg /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.013.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --index-format 'i8n1i8' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i1.fq --i2 /builddir/build/BUILD/samtools-1.15.1/test/i2.fq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.014.sam
.. ok

test_depad:
	Generate BAM file                                           .. ok

	depad  (SAM input)                                          .. ok

	depad -s (SAM input)                                        .. ok

	depad -u (SAM input)                                        .. ok

	depad -1 (SAM input)                                        .. ok

	depad  (BAM input)                                          .. ok

	depad -s (BAM input)                                        .. ok

	depad -u (BAM input)                                        .. ok

	depad -1 (BAM input)                                        .. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/1_map_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/1_map_cigar_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/2_equal_cigar_full_seq.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/2_equal_cigar_full_seq_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/3_map_cigar_equal_seq.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/3_map_cigar_equal_seq_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/4_X_cigar_full_seq.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/4_X_cigar_full_seq_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/5_insert_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/5_insert_cigar_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa -i 0 /builddir/build/BUILD/samtools-1.15.1/test/stat/5_insert_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/7_supp.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/7_supp_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/8_secondary.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/8_secondary_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -S RG -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/1_map_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -S RG -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/10_map_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -t /builddir/build/BUILD/samtools-1.15.1/test/stat/11.stats.targets /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam ref1:10-24 ref1:30-46 ref1:39-56 | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -g 4 -t /builddir/build/BUILD/samtools-1.15.1/test/stat/11.stats.targets /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -g 4 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam ref1:10-24 ref1:30-46 ref1:39-56 | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_3reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -p -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_3reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_2reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -p -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_2reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_ok.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_ok_ox_bz.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_fail_bc_length.sam | tail -n+4

	/builddir/build/BUILD/samtools-1.15.1/test/stat/13.barcodes.fail.expected: No such file or directory
.. expected failure

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_fail_hyphen.sam | tail -n+4

	/builddir/build/BUILD/samtools-1.15.1/test/stat/13.barcodes.fail.expected: No such file or directory
.. expected failure

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_fail_qt_length.sam | tail -n+4

	/builddir/build/BUILD/samtools-1.15.1/test/stat/13.barcodes.fail.expected: No such file or directory
.. expected failure

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I s1 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I grp2 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I grp3 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I Sample /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam -b /tmp/HGqYHviuJL - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -r -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -cp -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a_regex.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b_regex.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -o - -s 1 -O sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -p -c -t PG -O SAM - /tmp/oCV2h3_G_a/merge.tag.1.bam /tmp/oCV2h3_G_a/merge.tag.2.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -p -c -n -t PG -O SAM - /tmp/oCV2h3_G_a/merge.tag.3.bam /tmp/oCV2h3_G_a/merge.tag.4.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge --no-PG -O SAM - /builddir/build/BUILD/samtools-1.15.1/test/merge/test_no_pg_rg_co.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge --no-PG -O SAM -L /builddir/build/BUILD/samtools-1.15.1/test/merge/merge.bed - /tmp/oCV2h3_G_a/merge.bed.1.bam /tmp/oCV2h3_G_a/merge.bed.2.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam -b /tmp/4CYLXi_YdP - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -r -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -cp -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a_regex.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b_regex.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -o - -s 1 -O sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -p -c -t PG -O SAM - /tmp/oCV2h3_G_a/merge.tag.1.bam /tmp/oCV2h3_G_a/merge.tag.2.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -p -c -n -t PG -O SAM - /tmp/oCV2h3_G_a/merge.tag.3.bam /tmp/oCV2h3_G_a/merge.tag.4.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 --no-PG -O SAM - /builddir/build/BUILD/samtools-1.15.1/test/merge/test_no_pg_rg_co.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 --no-PG -O SAM -L /builddir/build/BUILD/samtools-1.15.1/test/merge/merge.bed - /tmp/oCV2h3_G_a/merge.bed.1.bam /tmp/oCV2h3_G_a/merge.bed.2.bam
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/oCV2h3_G_a/sortout
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -f /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/oCV2h3_G_a/sortout.bam
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -o /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/oCV2h3_G_a/sorttmp
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -n -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -n -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -t AS -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -t FI -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/oCV2h3_G_a/sortout
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -f /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/oCV2h3_G_a/sortout.bam
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -o /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/oCV2h3_G_a/sorttmp
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -n -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -n -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -t AS -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -t FI -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam -O /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate1.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate3.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam -f /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/1_fast_collate.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam -f -r 4 /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/2_fast_collate_with_tmp.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam -O /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate1.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate3.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam -f /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/1_fast_collate.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam -f -r 4 /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/2_fast_collate_with_tmp.sam
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/1_coord_sort.sam -

	ERR: [bam_mating_core] ERROR: Coordinate sorted, require grouped/sorted by queryname.

.. expected failure

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/2_isize_overflow.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/3_reverse_read_pp_lt.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/4_reverse_read_pp_equal.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/5_ct.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/6_ct_replace.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/7_two_read_mapped.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/8_isize_overflow_64bit.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/1_coord_sort.sam -

	ERR: [bam_mating_core] ERROR: Coordinate sorted, require grouped/sorted by queryname.

.. expected failure

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/2_isize_overflow.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/3_reverse_read_pp_lt.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/4_reverse_read_pp_equal.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/5_ct.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/6_ct_replace.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/7_two_read_mapped.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/8_isize_overflow_64bit.sam -
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools calmd -uAr /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.1.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.ref.fa
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools calmd -@ 2 -uAr /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.1.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.ref.fa
.. ok

test_idxstat:
	/builddir/build/BUILD/samtools-1.15.1/samtools idxstats /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam
.. ok

test_idxstat:
	/builddir/build/BUILD/samtools-1.15.1/samtools idxstats /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.cram
.. ok

test_idxstat:
	/builddir/build/BUILD/samtools-1.15.1/samtools idxstats /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/1.quickcheck.badeof.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/2.quickcheck.badheader.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/3.quickcheck.ok.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/4.quickcheck.ok.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/5.quickcheck.scramble30.truncated.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/6.quickcheck.cram21.ok.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/7.quickcheck.cram30.ok.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/8.quickcheck.cram21.truncated.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/9.quickcheck.cram30.truncated.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/10.quickcheck.notargets.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck -v  /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/1.quickcheck.badeof.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/2.quickcheck.badheader.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/3.quickcheck.ok.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/4.quickcheck.ok.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/5.quickcheck.scramble30.truncated.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/6.quickcheck.cram21.ok.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/7.quickcheck.cram30.ok.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/8.quickcheck.cram21.truncated.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/9.quickcheck.cram30.truncated.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/10.quickcheck.notargets.bam | sed 's,.*/quickcheck/,,'
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck -uv /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/10.quickcheck.notargets.bam | sed 's,.*/quickcheck/,,'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.bam | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v21.cram | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader --in-place /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v21.cram && /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v21.cram | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader --in-place /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram && /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader -c "sed 's/2014 Genome/2019 Genome/g'" /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.bam | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader -c "sed 's/2014 Genome/2019 Genome/g'" /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -m overwrite_all /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -m orphan_only /builddir/build/BUILD/samtools-1.15.1/test/addrprg/2_fixup_orphan.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -R '1#9' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -r '@RG\tID:1#8\tCN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -m overwrite_all -R '1#8' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -r 'ID:1#8' -r 'CN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -w -r '@RG\tID:1#8\tCN:Sanger\tDS:Testing the editing code.' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -m overwrite_all /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -m orphan_only /builddir/build/BUILD/samtools-1.15.1/test/addrprg/2_fixup_orphan.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -R '1#9' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -r '@RG\tID:1#8\tCN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -m overwrite_all -R '1#8' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -r 'ID:1#8' -r 'CN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -w -r '@RG\tID:1#8\tCN:Sanger\tDS:Testing the editing code.' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/1_name_sort.sam -

	ERR: [markdup] error: queryname sorted, must be sorted by coordinate.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/2_bad_order.sam -

	ERR: [markdup] error: not in coordinate sorted order.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/3_missing_mc.sam -

	ERR: [markdup] error: no MC tag. Please run samtools fixmate on file first.
[markdup] error: unable to assign pair hash key.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/4_missing_ms.sam -

	ERR: [markdup] error: no ms score tag. Please run samtools fixmate on file first.
[markdup] error: no ms score tag. Please run samtools fixmate on file first.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/5_markdup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam -r --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/6_remove_dups.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/7_mark_supp_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 100 --mode s -t -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/8_optical_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t --include-fails -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/9_optical_dup_qcfail.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t -O sam --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+):([[:digit:]]+)$' --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+):([[:print:]]+)' --coords-order xyt --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+)' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+)$' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/12_optical_chain_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/1_name_sort.sam -

	ERR: [markdup] error: queryname sorted, must be sorted by coordinate.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/2_bad_order.sam -

	ERR: [markdup] error: not in coordinate sorted order.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/3_missing_mc.sam -

	ERR: [markdup] error: no MC tag. Please run samtools fixmate on file first.
[markdup] error: unable to assign pair hash key.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/4_missing_ms.sam -

	ERR: [markdup] error: no ms score tag. Please run samtools fixmate on file first.
[markdup] error: no ms score tag. Please run samtools fixmate on file first.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/5_markdup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam -r --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/6_remove_dups.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/7_mark_supp_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 100 --mode s -t -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/8_optical_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t --include-fails -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/9_optical_dup_qcfail.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t -O sam --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+):([[:digit:]]+)$' --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+):([[:print:]]+)' --coords-order xyt --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+)' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+)$' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/12_optical_chain_regex.sam -
.. ok

test_bedcov:
	/builddir/build/BUILD/samtools-1.15.1/samtools bedcov /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bed /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bam
.. ok

test_bedcov:
	/builddir/build/BUILD/samtools-1.15.1/samtools bedcov -j /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bed /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bam
.. ok

test_bedcov:
	/builddir/build/BUILD/samtools-1.15.1/samtools bedcov -g512 -G2048 /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov_gG.bed /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bam
.. ok

test_split:
	/builddir/build/BUILD/samtools-1.15.1/samtools split  --output-fmt sam -u /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.unk.sam -f /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.%!.%. /builddir/build/BUILD/samtools-1.15.1/test/split/split.sam
.. ok

test_split:
	/builddir/build/BUILD/samtools-1.15.1/samtools split  -@ 2 --output-fmt sam -u /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.unk.sam -f /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.%!.%. /builddir/build/BUILD/samtools-1.15.1/test/split/split.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /tmp/oCV2h3_G_a/longref.sam.gz
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /tmp/oCV2h3_G_a/longref.sam.gz CHROMOSOME_I:10000000114-10000000168
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG -L /builddir/build/BUILD/samtools-1.15.1/test/large_pos/test.bed /tmp/oCV2h3_G_a/longref.sam.gz
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -O sam --no-PG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref_name.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -O sam --no-PG - /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref.sam /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref2.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools depth /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools depth -b /builddir/build/BUILD/samtools-1.15.1/test/large_pos/test.bed /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools tview -d T -p CHROMOSOME_I:10000000000 /tmp/oCV2h3_G_a/longref.sam.gz
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort    -O sam --no-PG -n -m 10M test/large_pos/longref3.sam |
                     /builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam --no-PG - - |
                     /builddir/build/BUILD/samtools-1.15.1/samtools sort    -O sam --no-PG -m 10M
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --hard-clip -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --strand -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --strand --filter-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --strand --fail-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG  --keep-tag --output-fmt=sam --original -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG  --keep-tag --output-fmt=sam --strand --both-ends -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/2_both_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --hard-clip -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --strand -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --strand --filter-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --strand --fail-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG  --keep-tag --output-fmt=sam --original -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG  --keep-tag --output-fmt=sam --strand --both-ends -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/2_both_test_data.sam
.. ok

test_ampliconstats:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconstats -@ 2 -S -t 50 -d 1,20,100 /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_hard_clipped.expected.sam /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_soft_clipped.expected.sam /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_soft_clipped_strand.expected.sam /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/2_both_clipped.expected.sam | egrep -v 'Samtools version|Command line'
.. ok

test_ampliconstats:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconstats -@ 2 -c 0 /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/multi_ref.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconstats/mixed_clipped.sam | egrep -v 'Samtools version|Command line'
.. ok


Number of tests:
    total            .. 807
    passed           .. 776
    failed           .. 0
    expected failure .. 31
    unexpected pass  .. 0

test/merge/test_bam_translate test/merge/test_bam_translate.tmp
test/merge/test_rtrans_build
test/merge/test_trans_tbl_init
cd test/mpileup && AWK="gawk" ../regression.sh mpileup.reg

=== Testing mpileup.reg regressions ===

EXPECTED FAIL: Task failed, but expected to fail;
when running $samtools mpileup -ABQ0 -a -l xx.bed3 xx#depth3.bam

Expected   passes:   118
Unexpected passes:   0
Expected   failures: 1
Unexpected failures: 0
=> PASS
cd test/mpileup && AWK="gawk" ../regression.sh depth.reg

=== Testing depth.reg regressions ===

EXPECTED FAIL: Task failed, but expected to fail;
when running $samtools depth -a -b xx.bed3 xx#depth3.bam

Expected   passes:   47
Unexpected passes:   0
Expected   failures: 1
Unexpected failures: 0
=> PASS
cd test/consensus && AWK="gawk" ../regression.sh consensus.reg

=== Testing consensus.reg regressions ===

Expected   passes:   62
Unexpected passes:   0
Expected   failures: 0
Unexpected failures: 0
=> PASS
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: samtools-1.15.1-3.fc40.ppc64le
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.2EFyfe
+ umask 022
+ cd /builddir/build/BUILD
+ cd samtools-1.15.1
+ DOCDIR=/builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/doc/samtools
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/doc/samtools
+ cp -pr /builddir/build/BUILD/samtools-1.15.1/AUTHORS /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/doc/samtools
+ cp -pr /builddir/build/BUILD/samtools-1.15.1/ChangeLog.old /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/doc/samtools
+ cp -pr /builddir/build/BUILD/samtools-1.15.1/NEWS /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/doc/samtools
+ cp -pr /builddir/build/BUILD/samtools-1.15.1/examples /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/doc/samtools
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.fALj4A
+ umask 022
+ cd /builddir/build/BUILD
+ cd samtools-1.15.1
+ LICENSEDIR=/builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/licenses/samtools
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/licenses/samtools
+ cp -pr /builddir/build/BUILD/samtools-1.15.1/LICENSE /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le/usr/share/licenses/samtools
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: samtools = 1.15.1-3.fc40 samtools(ppc-64) = 1.15.1-3.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/perl ld64.so.2()(64bit) ld64.so.2(GLIBC_2.23)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libhts.so.3()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libncursesw.so.6()(64bit) libtinfo.so.6()(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: samtools-debugsource-1.15.1-3.fc40.ppc64le
Provides: samtools-debugsource = 1.15.1-3.fc40 samtools-debugsource(ppc-64) = 1.15.1-3.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: samtools-debuginfo-1.15.1-3.fc40.ppc64le
Provides: debuginfo(build-id) = 38b975386f27206483200f281a4c504215f61e8c debuginfo(build-id) = 521b788fb56ea8c9f7506c834de2daf42d18e764 debuginfo(build-id) = 61b022e308d166d14f6a004af0c35090d4385dde debuginfo(build-id) = 74ffa0e9fa9811cef2617dad5bc20e9cb45dea74 debuginfo(build-id) = 87ab00d55f71a9101ba5d953588815aee4daffec debuginfo(build-id) = c28ef59bcbefc16777780eeec6aada2f1521b65c debuginfo(build-id) = c9147302d96d44a9a96ff70349b8b8a546b4cead samtools-debuginfo = 1.15.1-3.fc40 samtools-debuginfo(ppc-64) = 1.15.1-3.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: samtools-debugsource(ppc-64) = 1.15.1-3.fc40
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le
Wrote: /builddir/build/RPMS/samtools-1.15.1-3.fc40.ppc64le.rpm
Wrote: /builddir/build/RPMS/samtools-debugsource-1.15.1-3.fc40.ppc64le.rpm
Wrote: /builddir/build/RPMS/samtools-debuginfo-1.15.1-3.fc40.ppc64le.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.Ymug80
+ umask 022
+ cd /builddir/build/BUILD
+ cd samtools-1.15.1
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/samtools-1.15.1-3.fc40.ppc64le
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.cMuKjc
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/samtools-1.15.1-SPECPARTS
+ rm -rf samtools-1.15.1 samtools-1.15.1.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild samtools-1.15.1-3.fc40.src.rpm
Finish: build phase for samtools-1.15.1-3.fc40.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1695069238.164412/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/samtools-1.15.1-3.fc40.src.rpm) Config(child) 1 minutes 53 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "samtools-debugsource",
            "epoch": null,
            "version": "1.15.1",
            "release": "3.fc40",
            "arch": "ppc64le"
        },
        {
            "name": "samtools",
            "epoch": null,
            "version": "1.15.1",
            "release": "3.fc40",
            "arch": "src"
        },
        {
            "name": "samtools",
            "epoch": null,
            "version": "1.15.1",
            "release": "3.fc40",
            "arch": "ppc64le"
        },
        {
            "name": "samtools-debuginfo",
            "epoch": null,
            "version": "1.15.1",
            "release": "3.fc40",
            "arch": "ppc64le"
        }
    ]
}
RPMResults finished